Ochotona princeps (American pika): 101522195
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Entry
101522195 CDS
T07609
Symbol
SEMA4D
Name
(RefSeq) semaphorin-4D isoform X1
KO
K06521
semaphorin 4
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101522195 (SEMA4D)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
opi04090
]
101522195 (SEMA4D)
CD molecules [BR:
opi04090
]
Proteins
101522195 (SEMA4D)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
ig
Ig_3
I-set
Ig_5
Ig_2
DUF3891
Motif
Other DBs
NCBI-GeneID:
101522195
NCBI-ProteinID:
XP_004581195
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Position
1A:62902634..62936172
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AA seq
865 aa
AA seq
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MRMCAAPVRGLLTTLVVLFGTAVAFAPVPRITWEHREVRLLQFHEPGIYNYSALLLSEDQ
NTLYVGAREAVFALKALNISEKQHEAYWKVSEDKKAKCAEKGKSRQTECLNYIRVLQPLN
ATSLYVCGTNAFQPACDHLSLTSFQFLGRTEDGKGRCPFDPAHSYTSIMVDGELYSGTSY
NFLGSEPIISRTFSHNPLRTEYAIPWLNEPSFVFADVIRKRHEGAEVEDDRVYFFFTEVS
VEYEFIFKLLVPRIARVCKGDQGGLRTLQKKWTSFVKARLTCSRPDSGLIFNVLRDVFVL
WAPGLREPVFYALFTPQLNNVGLSAVCAYNLSTAEEVFARGKYMQSATVEQSHTKWVRYN
GPVPTPRPGACIDGEARAANYTSSLNLPDKTLQFIKDHPLMDDSVSPIDGRPRLIKKDVS
YTQIVVDRTKALDGTIYDVMFLSTDRGALHKAVSLYGEVHIVEETQLFQDLQPVQTLLLS
SKEGRRFVYAGSNSGVVQAPLAFCGKHNSCEDCVLARDPYCAWSLPAAACVALPQADTPD
RSLIQDMSGDAAACPDKVKASHRQHFFKHGGTAELKCSHKSNLAQVVWKFQDGLLKAESP
KYGLVGSKHLLIFNLSEGDSGVYQCLSEERVRNKTVSQVVAKHVLEVKLLPRTPTAPTSP
TTHSEGSRVGTKGLVPATQGPSLTTLAMRATSPGATTTTPPFRSAATSSTSCEPKIVINT
VPQLHSKTMYLKSSDNRLLMSLFLFFFVLCLCLFSYNCYQGYLPSQCLKFRSALLLGKKK
PKSDFSDLEQSVKETLVEPGSFSQQNGEHPKPALDTGYETEQDTLTSKVPTDREDSQRID
DLSARDKPFDVKCELKFADSDADGD
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgtgcgctgcccctgtcagggggctgctcaccaccttggtggtgctgtttgga
acggcagtggcgtttgcacctgtaccccggatcacttgggagcacagagaggtacggctg
ctgcagttccacgagccaggcatctacaactactcggccttgctgctgagcgaggaccag
aacactctgtacgtgggcgcccgggaagcagtcttcgccttgaaagcactcaacatctca
gagaagcagcacgaggcatattggaaggtctccgaagacaagaaagcaaaatgtgcagag
aaagggaaatcaagacagacagaatgtctcaactacatccgggtgctgcagcccctcaac
gccacctccctctatgtgtgtgggaccaacgccttccagccggcctgtgaccatctgagc
ttaacatcttttcagtttctggggagaactgaggatggcaaaggaaggtgtcctttcgac
ccagcccacagctacacttccatcatggttgatggagagctgtattccgggacatcgtat
aacttcctgggaagtgagcccatcatctcccggaccttctctcacaaccctctgaggacg
gagtacgccatcccctggctgaatgagcccagctttgtctttgctgacgtgatccggaaa
cggcatgagggcgccgaggtggaggacgacagggtctacttctttttcacggaggtgtcc
gtggagtacgagttcatcttcaagctgctggtcccacggatagcaagggtgtgcaagggt
gaccagggtggcctgaggaccctccagaagaagtggacctcctttgtgaaagccaggttg
acctgctcccggccagacagcggcctgatcttcaacgtgctacgggatgtcttcgtgctg
tgggcccccggcctcagggaaccagtgttctacgcactgttcaccccgcagctgaacaac
gtggggctgtcagccgtgtgcgcctacaacctgtccacggcggaggaggtttttgcccgc
ggcaagtatatgcagagcgccacggtggaacagtcacacaccaagtgggtgcgctacaac
ggccctgtgcccacaccgcggcctggagcgtgcatcgacggggaggcgcgggcggccaac
tataccagctccctgaatctccctgacaaaacgctgcagttcatcaaagaccaccccctg
atggatgactctgtgagccccatagacggcaggccccgcttaatcaagaaggatgtgagc
tacacccagattgtggtggacaggacgaaggcgcttgacggcaccatctatgacgtcatg
ttcctcagcacagaccgtggtgccctgcacaaagccgtcagcctgtacggtgaagtacat
attgttgaggagactcagctcttccaggacctccagcctgtgcagaccctgctgctgtcg
tcgaaggagggcaggaggtttgtctatgccggctccaactcgggcgtggtccaggcgccc
ctggccttctgtgggaagcacaacagctgtgaggactgtgtgctggcgcgggacccctac
tgtgcctggagcctgcccgcagccgcctgcgtggccctgccccaggccgacacccccgac
aggagcctgatccaggacatgagcggcgacgcggcagcatgcccggataaagttaaagca
agtcaccggcagcattttttcaagcacggtggcacggccgagctcaaatgctcccacaag
tccaacctggcgcaggtggtgtggaagttccaggacggcttgctgaaggctgagagcccc
aagtacggcctcgtgggcagcaaacacctgctcatcttcaacctgtcagaaggagacagc
ggggtgtatcagtgcctgtcggaggagagggtccggaacaagaccgtctcccaggtggtg
gcaaagcacgtgctggaggtgaagctgctcccacggacgcccacggcccccacctcgccc
acgactcactccgagggcagtagggttgggaccaaggggttggtgccagccacgcagggg
ccctccctgacaaccctggccatgcgggccacctcccccggggccaccaccaccaccccg
cctttcaggtccgcagccaccagcagcacgtcgtgcgaaccaaagatcgtcatcaacacg
gtgccgcagctgcactcgaagactatgtatctcaagtccagtgacaaccggctgctcatg
tctctcttcctcttcttcttcgtcctctgcctctgcctcttttcctacaactgctaccag
ggctacctgcccagccagtgcttgaagttccgctcggccctgctgctgggcaagaagaaa
cccaagtcggacttctcggacctggaacagagcgtgaaggaaacgctggtggagccgggg
agcttctcacagcaaaacggggagcaccctaagccagccctggacacgggctatgagacg
gagcaggacacgctcaccagcaaagtccccacagacagggaggactcccagaggatcgac
gacctctctgccagggacaaaccattcgacgtcaagtgtgagttgaagttcgccgactcg
gatgctgacggcgactga
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