Ochotona princeps (American pika): 101523366
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Entry
101523366 CDS
T07609
Name
(RefSeq) integrin alpha-X
KO
K06462
integrin alpha X
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04610
Complement and coagulation cascades
opi04810
Regulation of actin cytoskeleton
opi05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
101523366
09150 Organismal Systems
09151 Immune system
04610 Complement and coagulation cascades
101523366
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
101523366
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
opi04515
]
101523366
04090 CD molecules [BR:
opi04090
]
101523366
Cell adhesion molecules [BR:
opi04515
]
Integrins
Integrin alpha subunits
101523366
CD molecules [BR:
opi04090
]
Proteins
101523366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_alpha2
VWA
FG-GAP
VWA_2
FG-GAP_3
Integrin_alpha
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
101523366
NCBI-ProteinID:
XP_004586972
LinkDB
All DBs
Position
6:complement(24334901..24350824)
Genome browser
AA seq
1161 aa
AA seq
DB search
MTRTSTALLLSAAVASVLCFNLDTEQPSTFRMPSAGFGHSVAQYDGSWVVVGAPQEITAP
NQTGSLYQCKYGTDTCEPIYLQVPPEAVNMSLGLSLAAATKPSRLLACGPTVQHACKENI
YLTGLCFLLSHSFQLSQRLPAAMQECPRQEQDIAFLIDGSGSIAPSNFVIMLNFVRAVMT
QFSRPSTQFSLVQFSYRFHMHFNFNNFISSSDPLSLLDSVPQLRGATHTASAIQWVVQHV
FTAYNGARKDATRILIVITDGQKYRDPLDYPAVIPLAEAAGIIRYAIGVGSAFQSSYSRK
ELDDIASEPSREHVFRVDDFDALREIQNQLKEKIFAIEGTETTRSSSFEQEMAQEGFSAL
FMPGGPVLGAVGSFTWSGGAFLYPTGWNPTFINMSQDNVDMRDSYLGYSSELALWKGVQN
LVLGAPRYQHTGKVVLFTQTSAQWEPRTEVVGTQVGSYFGASLCSVDVDRDGNTDLVLIG
APHYYEQTRGGRVSVCPLPKGRALWHCPAILRGEQGQPWSRFGAALTVMGDVNGDELTDV
VIGAPGEQENRGAVYLFHGTPELDISPTYSQRITGSQLSSGLQYFGQSLSGGQDLTGDGL
VDLAVGALGQALLLRTRPILRVKVDMGFTPTEVARSVFECQEQAASKQALGNATVCLHVY
EHSKTQLGDLQSAVTFDLALDPGRLSPRAVFKETSLWTLRRQQVLGLKQHCETVPLLLQA
CVEDVVTPIILRLNFSLVGNPLHSFGHLRPILAVDAQRYFTASLPFEKNCGADHICQDDL
AISFSVSGLKTLIVGNHLELDLDVTVRNDGEDSYGTTVTFSYPAGVSYRRVARIQAQSQL
HSPSMTCDSIIPLGSQDATSTSCSLKHLIFRGGTQITFLATFDVSPRAKLGNRLLLTANV
SSENNTPRTSKSFFQLELPVMYAVYMLVSSHEQSTRYFNFSASEKAGSSVAQHRYQVNNL
GQRDLPLSINFWVPVELNGAAVWTEVKVSQPQNQAVRCSSEKVAPPAPGIGTDIQKSPVL
DCSAAHCLRFRCHVPSFGIQEELDFMLNGTLSFAWLSQMPQKKVSVVSMAELTFDRSVYS
QLPGQEMFLRAQVETVLEEYQVHNPVPLVVGSCVGGLLLLALISALLYKVGFFKRQYKEM
MEEANGQIVPENALPDPQVAQ
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggaccagcacagccttgctgctgtctgcagccgtggcttctgttctctgcttc
aatttggacacggagcagccaagcactttccgcatgcccagtgctggctttggacacagc
gtggcccagtacgacggctcgtgggtggtggttggagccccccaggaaataacggcgccc
aaccagacaggtagcctctaccaatgcaaatacggcacggacacatgtgagcccatctac
ctgcaggtcccccctgaggctgtgaacatgtccctgggcctgtccctggcagctgccacc
aagccctcccggctgctggcctgtggtcccacggtgcagcatgcatgcaaggagaacata
tacttgactgggctgtgtttcctgctgagccactccttccagttgtcccagaggctcccg
gctgccatgcaagagtgccccaggcaggagcaagacattgcattcctgattgacggctcg
ggcagcatcgcccctagtaactttgtcatcatgctgaacttcgtaagggccgtgatgacc
cagttctccagacccagcacccaattctccctggtgcagttctcctatcgtttccatatg
cacttcaacttcaacaacttcatctccagctcagaccctctaagcttgttggattctgtg
ccgcagttacggggggccacccacacggcttcagccatccaatgggttgtacagcatgtg
ttcactgcctacaacggggcccgcaaagatgccaccaggatcctcatcgtcatcaccgat
ggccagaagtatagagaccccttggattacccagcagtcatccccctggctgaggcagcc
ggcatcattcgctatgcaattggggtgggatctgctttccaaagcagctattcccggaag
gaattagatgacatcgcctcggagccctccagagaacacgtatttagagtggacgacttt
gatgcattgagggaaattcaaaaccagctgaaggagaagatctttgccattgaggggacg
gagaccaccaggagcagctcctttgagcaggagatggcccaggagggcttcagtgcactg
tttatgcctggtggcccagtgctgggagctgtgggcagcttcacctggtctgggggcgcc
tttctgtatcccacgggttggaatcccaccttcatcaacatgtctcaggacaacgtggac
atgagggactcatacctgggttactccagtgagctggccctttggaagggggtgcagaac
ttggttctgggggcaccgcgctaccagcacaccgggaaggtcgttctcttcacccagact
tccgcgcagtgggagccgaggaccgaggttgtgggaacccaggttggctcctacttcggg
gcctccctgtgctcagtggacgtggacagagatggcaacactgacctggtcctcattggg
gccccccactactacgagcagacgcgaggtggccgcgtgtctgtgtgtcctttgccaaag
gggcgggctctgtggcactgcccggccattctccgtggggaacagggccaaccctggagc
cgctttggggcagctctaacggtgatgggggatgtgaatggagatgagctgacagacgtg
gtcatcggggccccaggagagcaagagaatcggggtgcagtctatctgttccatggaacc
ccagagctggacatcagccccacctatagccagaggatcacaggctcccagctgtcctct
gggctccagtatttcgggcagtctctgagcgggggacaggacctcactggggatggcctt
gtggacctggccgtgggggccctgggacaagcgctgctgctcaggaccagacctatcctc
agggtaaaggtggacatgggcttcacacctaccgaggtggcaaggtctgtgtttgagtgt
caggagcaggcagcctctaagcaggccctggggaatgccaccgtctgccttcatgtttac
gaacattccaagacccagctgggtgatctccaaagtgctgtgacctttgaccttgccctg
gaccctggccgactgagtccccgcgctgtcttcaaggagacaagcctgtggactctgagg
cgacagcaagtcctggggctgaagcagcattgtgaaacggtgccactgctcctccaggcc
tgcgtggaggatgtcgtgacccccatcatcttgcgtctcaacttctctctggtgggcaac
cccctccattcctttggacacctccggcccatactggccgtggatgctcagagatatttc
acggcgtctcttccctttgagaagaactgtggagctgaccacatctgccaggatgacctc
gccatctccttcagcgtctcaggcttgaagactctgatcgtggggaaccacctggagctg
gacctggacgtgactgtacggaatgatggtgaggactcctatggaaccacggtcaccttc
tcctatccggctggggtgtcctatcggcgcgtggcaaggatccaggcccagagtcagcta
cattccccgagcatgacatgtgacagcatcattcccttggggagccaggatgccaccagc
accagctgcagcctcaagcaccttatcttccgcgggggcacccagatcaccttcttggct
accttcgacgtctcccctagggccaagctgggaaaccggctgcttctgacagccaatgtg
agcagtgagaataacacgcccaggaccagcaagagctttttccagctggagctgccggtg
atgtatgctgtctacatgctcgtcagcagccatgagcagtccaccaggtacttcaacttc
tcggcctcagagaaggctggcagcagcgtggcccagcacagataccaggtcaacaacctg
ggacagagggacctgccactcagcatcaacttctgggtgcctgtggagctgaatggggct
gccgtgtggacggaggtgaaggtgtcccagcctcagaaccaggctgttcggtgctcttcg
gagaaagtagctcccccggcgcctggcatagggacagacattcagaagagccctgtgctg
gactgcagtgcagcccactgcctgaggttccgctgccacgtcccctccttcggcatccag
gaggagctagacttcatgctgaatggcaccctcagctttgcctggctcagccagatgcca
cagaagaaggtgtcggtggtgagcatggctgagctgaccttcgacaggtctgtatactct
cagcttccaggccaggagatgttcttgagagcccaggtggagacggtgctggaggagtac
caggtgcacaatcccgtgcccctggtggtgggcagctgtgtgggtggcctcctgctgctg
gctctcatctcagccctgctgtacaaggtgggcttcttcaaacgtcagtacaaagaaatg
atggaggaagcaaatgggcagattgttccagaaaatgcactaccggacccccaagtggcc
cagtga
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