Ochotona princeps (American pika): 101523818
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Entry
101523818 CDS
T07609
Symbol
CARS1
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101523818 (CARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
opi01007
]
101523818 (CARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
opi03016
]
101523818 (CARS1)
Enzymes [BR:
opi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
101523818 (CARS1)
Amino acid related enzymes [BR:
opi01007
]
Aminoacyl-tRNA synthetase
Class I (G)
101523818 (CARS1)
Transfer RNA biogenesis [BR:
opi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
101523818 (CARS1)
Prokaryotic type
101523818 (CARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
Arc1p_N_like
tRNA-synt_1
Motif
Other DBs
NCBI-GeneID:
101523818
NCBI-ProteinID:
XP_004599311
LinkDB
All DBs
Position
1:complement(110316282..110342145)
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AA seq
831 aa
AA seq
DB search
MAGSSGEQALDFRSLLGIRDEAARAWALNEHLSTRSYVQGHALSQADVDLFRQLSAPPAD
VRLFHVARWFRHIEALLGGARDTGQPCGPQASKGRRVQPQWSPPAGTPPCKLRLYNSLTR
SKDVFIPQDGKKVSWYCCGPTVYDASHMGHARSYISFDILRRVLRDYFKFDVFYCMNITD
IDDKIIRRARQNHLVERYLEKRPQAPQVLADVHAALKLFSVKLNETVDPDKRQMLERMQH
AVTLAAEPLESALKAQLPEEKVQGCVQALLEEAKDLLSEWLDSMFGSEVTDNSIFSQLPK
FWEGEFHKDMEALNVLPPDVLTRVSEYVPEIIGFVRRIVENGYGYVSNGSVYFDTVKFAS
SEKHSYGKLVPEAVGDQKALQEGEGDLSVAADRLSEKRSANDFALWKASKPGEPSWPCPW
GKGRPGWHIECSAMASAVLGASMDIHGGGFDLRFPHHDNELAQSEAHFDSDCWVRYFLHT
GHLTIAGCKMSKSLKNFITIKDALKKHSARQLRLAFLLHSWKDTLDYSSNTMESALQYEK
FLNEFFLNVKDLLRAPVDVTGQFEKWEEEEAALSHSFCNRKAAVHAALCDNVDTRTAMEE
MRALVTQSNLYMGTRKAARRRPNRGLLQSIAQYLTYMLKVFGAIEEDSALGFPVGGPGSS
LDLEATVLPYLHVLSEFREGVRRIAREQKVPEILQLCDALRDEVLPELGVRLEDHEGLPT
VVKLLDRATLLKEKEDKQRLEEEKRRRREEAARKKQEQEAAKLAKMKTPPSEMFLSESDK
YSKFDENGLPTHDAEGKELSRGQAKKLRKLFEAQEKLHREYLQTLQSGGAQ
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggctggttccagcggggagcaggctctcgacttcaggtccctgttgggcattagggac
gaggcagccagggcgtgggccctgaatgagcacctgagcacgcgtagctatgtccagggc
catgcgctgtcccaggcggacgtcgacctgttcaggcagctctcggccccgcccgctgac
gtgcggctcttccacgtggctcggtggttcaggcacatagaagcgctcctgggcggcgct
cgggacacaggccagccctgtgggccccaagcaagtaaagggcgccgggtgcagccacag
tggtctcccccagccgggaccccgccgtgcaagctacgcctttacaacagcctcacccgc
agcaaggacgtgttcataccccaagatggaaagaaggtgtcgtggtactgctgcgggccc
actgtctatgacgcgtcccacatgggccacgccaggtcctacatatcattcgacatcctg
aggagagtgctgagggattatttcaagtttgacgtcttctactgcatgaacatcaccgac
attgatgacaagatcatcaggagggcccggcagaaccacctggtggagcggtacctggag
aagaggccgcaggcgccgcaggtgctggccgacgtccatgccgccctgaagctgttctcg
gtgaagctgaatgagactgtggaccccgacaagaggcagatgctggagcgcatgcagcac
gccgtgacgctcgccgcagagccgctcgagagcgccctgaaggcccagctccccgaggag
aaggtccagggctgcgtgcaggccctgctggaggaggccaaggacctgctctccgagtgg
ctggactccatgtttggcagtgaggtcactgacaactccatcttctcccagctgcccaag
ttttgggaaggggaattccacaaggacatggaggccctgaacgtgctgcccccggacgtc
ctgacgcgggtgagcgagtatgtgccagagatcatcggcttcgtccggaggattgtggag
aacggctacgggtacgtctccaacggctctgtgtacttcgacacggtcaagtttgcctcc
agtgagaagcactcctatgggaagctggtccccgaggccgtcggggaccagaaggctctg
caggagggagaaggtgacctgagcgtcgcagccgaccgcttgagcgagaagcgctcagcc
aatgacttcgcactgtggaaggcctccaagccaggggagccgtcctggccgtgcccatgg
gggaagggtcgcccggggtggcacatcgagtgctccgccatggccagcgctgtgctagga
gcgtcgatggacattcatggaggagggttcgacctgcggtttccccatcacgacaacgag
ctggcacagtcggaggcgcactttgatagtgactgctgggtcaggtacttcctgcacacg
ggccacctgacgatcgctggctgcaagatgtcaaagtccctcaagaacttcatcaccatc
aaagacgccttgaaaaagcactcagcccgacagctgcggctggctttcctcctgcactcc
tggaaggacacgctggattattccagcaatacaatggagtcggcgctgcagtacgagaag
ttcttgaatgagttcttcctcaacgtgaaggacctgctgcgcgcccccgtggacgtcacc
gggcagtttgagaagtgggaggaggaggaggccgccctgagccacagcttctgcaacagg
aaggcggccgtgcacgcggcgctctgtgataacgtggacacgcgcactgccatggaggag
atgcgggccctggtcacccagagcaatctctacatgggcacccggaaggcggcccggagg
aggcccaaccggggcctgctgcagagcatcgcacagtacctgacatacatgctgaaggtc
ttcggagccatagaggaggacagtgccctgggtttcccggttggagggcctgggagcagc
ctggacctggaggccacggtgctgccctacctgcacgtgctgtccgagttcagagagggt
gtgcggaggattgcccgggagcagaaagtccccgagatcctgcagctctgcgatgccctt
cgggacgaggtcctgcccgagcttggggtgcggctggaagaccacgaagggctgccgaca
gtggtgaagctgctggacagggccacattgctcaaggagaaagaagacaagcaaaggctg
gaagaggagaagaggaggaggagggaggaggccgccaggaagaagcaggagcaagaggca
gctaagctggccaagatgaagaccccgcccagcgagatgttcctctccgagagcgacaag
tactccaagtttgatgaaaacggtctgcccacgcacgacgcggaaggcaaggagctgagc
cggggccaagccaagaagctgcggaagctcttcgaggcccaggagaagctgcaccgcgag
tacctgcagacgctgcaaagtggaggcgcacagtga
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