Ochotona princeps (American pika): 101523908 Help Entry 101523908         CDS       T07609                                  Symbol COL9A1 Name (RefSeq) collagen alpha-1(IX) chain   KO K08131   collagen type IX alpha Organism opi  Ochotona princeps (American pika) Pathway opi04151   PI3K-Akt signaling pathway opi04510   Focal adhesion opi04512   ECM-receptor interaction opi04820   Cytoskeleton in muscle cells opi04974   Protein digestion and absorption opi05165   Human papillomavirus infection Brite KEGG Orthology (KO) [BR:opi00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     101523908 (COL9A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     101523908 (COL9A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     101523908 (COL9A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     101523908 (COL9A1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     101523908 (COL9A1)  09160 Human Diseases   09172 Infectious disease: viral    05165 Human papillomavirus infection     101523908 (COL9A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:opi00535]     101523908 (COL9A1) Proteoglycans [BR:opi00535]  Extracellular matrix (ECM) proteoglycans   Others    101523908 (COL9A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Laminin_G_2 Laminin_G_3 Motif Other DBs NCBI-GeneID:  101523908 NCBI-ProteinID:  XP_012781013 LinkDB All DBs Position 12:complement(61431740..61545086) Genome browser AA seq 871 aa AA seqDB search MKSCWTIPAFFFVCSFLGPWASAAVKRRPRFPVNSNSNGGSELCPKIRNGQDDLPGFDLI SQFQIDKAASQRTIQRVEGSTTLQVAYKLGNNVDFRIPTRHLYPSGLPEEYSFLTTFRMT GSTLEKNWNIWQIQDSSGKEQVGVKINGQTKSVAFSYKGLDGSLQTAAFSKLPSLFDSQW HKVMIGVESSSATLFVDCIKIESLPIKPRSQINVDGFAVLGKLADNPQVSVPFELQWMLI HCDPLRPGRETCHELPVITRSQTTKKRGPPGQPGPPGPPGPPGVPGIDGIDGDRGPKGPP GPPGPIGEPGKPGAPGKPGTPGADGLTGPDGSPGSVGPRGQKGEPGVPGSRGFPGRGIPG PPGPPGTAGLPGELGRVGPVGDPGRRGPPGPPGPPGPSGTIGFHDGDPLCPNSCPPGRSG YPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGVVGDKG EKGARGLDGEPGPRGLPGAPGDQGQRGPPGEAGPKGDKGPQGSRGIPGPPGPKGDTGLPG MDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGLPGAKGVAGEKGNTGAPGKPGQLG NSGKPGPQGPPGEVGPRGPRGLPGSRGEVGPAGAPGLPGKLGSVGSPGLPGLPGPPGLPG MKGDRGVVGETGPKGEQGASGEEGEAGERGEFGDIGLPGPKGSGRAPTDQHIKQVCMRAI QEHFAEMAASLKRPDSGASGLPGRPGPPGPPGPPGENGFPGQMGIRGLPGLKGPPGALGL RGPKGDLGEKGERGLPGRGPKGLPGATGLPGDPGPASYGRNGRDGERGPPGVAGIPGVPG PPGPPGLPGFCEPASCTLQAGQRAFSKGPDQ NT seq 2616 nt NT seq  +upstreamnt  +downstreamnt atgaagagctgctggacaattccagctttcttctttgtatgcagtttcctgggaccgtgg gcatctgcagctgtcaagcgtcggccaagattccctgtcaattcaaattctaatggtgga agtgaactctgtccaaagatcaggaatggccaagatgacttacccgggtttgacctgatt tctcagttccaaatagataaagcagcatctcaaagaactatccagagagtagagggatca actacattacaagttgcttacaagttgggaaataatgtagatttcaggattccaacaagg catttatatcccagcggactgcctgaagaatactcctttctaactactttccggatgact ggaagcacacttgaaaagaactggaacatttggcagattcaagattcctcagggaaggag caagttggtgtgaagattaatggccaaacaaaatctgttgcattttcttataagggactc gatggaagcctccaaacagcagctttttcaaaattgccctccttgttcgattcccagtgg cacaaagtcatgattggtgtggaaagcagtagtgctactctctttgttgactgcatcaag attgaatctttacctattaaaccgaggagccaaatcaatgtcgatggctttgctgttctg ggaaaacttgcagataatccccaagtttctgttccatttgaacttcagtggatgctgatc cattgcgaccccctgcggcctgggagggaaacgtgccatgaactgcctgtaataacgcgt agccagaccacgaagaagaggggtcctcctggccagccggggccacccgggcctccggga ccccctggagttccaggcattgacggcatcgatggtgaccgaggtccaaagggtccccca ggtcctccgggtcctataggagaaccggggaaaccaggagctccaggcaagcctggcaca ccaggagctgatggattaacaggacctgatggatcccctggctctgttggaccaagggga caaaaaggagaacctggtgtgcctggatctcgcggatttccaggccgtggtattcctgga cccccgggtcctcctgggacagcaggactccctggagaacttggccgagtaggacctgtt ggtgatcctgggagaagaggaccacctggcccccctggacctccaggacccagtggaaca attggctttcatgatggagatcctctgtgtcccaattcctgcccaccaggtcgctctgga tatccaggcctaccaggcatgaggggtcataaaggggcaaaaggagaaattggtgaacca ggaagacaaggacacaagggtgaagaaggtgaccagggagagctgggagaagttggagct caaggacctccaggagctcaaggtttgaggggcatcaccggtgttgttggggacaaaggt gaaaaaggcgctcgtggtttggatggagaacctgggcctcggggtcttcctggtgcacct ggtgaccaaggacagcgagggcctcctggagaagcaggtcccaagggagacaaagggcct caaggttctagaggaatccctggcccccctggacccaaaggagacacgggcttgccaggc atggatggccgtgatggaatacctggaatgcctggaacaaagggtgaaccagggaaacct ggacctcctggtgatgctggcctgcaggggctaccaggtgtacctggacttcctggggca aagggtgttgctggagaaaagggtaacacaggtgcaccaggaaagcctggtcaactggga aactcaggaaaaccgggcccacagggacctccaggagaggtgggaccgcgaggacccagg ggccttcctggcagtagaggagaagtaggaccagctggagccccaggtcttccaggtaaa ttgggttctgttgggagccctggccttcctggcttgcctgggcctcctggacttcctggc atgaaaggtgacaggggtgtagttggggaaactggtccaaagggtgaacagggggcctct ggtgaagaaggagaagcaggagagaggggtgaatttggagacataggattgcctggccca aagggatctggtagagcacccacagaccagcacattaagcaggtttgcatgagagccata caagaacattttgctgagatggctgctagtctcaagcgtccagattcgggggcttcaggc ctccctggaagacctggtccccctggcccccctggtcctcctggagagaatggtttcccc ggccagatgggaattcgtggcctccctggcctgaaaggcccccctggtgctcttggtttg agaggacctaaaggtgacttgggagaaaagggagagcgtggccttccaggaagaggtccc aagggtttgcctggagcaacaggtcttccaggtgacccaggccctgccagttatgggaga aatggccgggatggggagcgaggcccccctggagtggcaggaattcctggtgtacctggt cctcctggcccacctggccttcctggtttctgcgagccggcctcttgcaccttgcaggct ggtcagcgagcatttagcaaagggcctgatcagtga

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