Ochotona princeps (American pika): 101525264
Help
Entry
101525264 CDS
T07609
Symbol
CNGB1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04022
cGMP-PKG signaling pathway
opi04024
cAMP signaling pathway
opi04740
Olfactory transduction
opi04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
101525264 (CNGB1)
04022 cGMP-PKG signaling pathway
101525264 (CNGB1)
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
101525264 (CNGB1)
04740 Olfactory transduction
101525264 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
opi04040
]
101525264 (CNGB1)
Ion channels [BR:
opi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101525264 (CNGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
101525264
NCBI-ProteinID:
XP_004584191
LinkDB
All DBs
Position
5:complement(29346869..29402101)
Genome browser
AA seq
1213 aa
AA seq
DB search
MLGWVQKVLPQPPGTAQKTKAVEEEAEDAEPEPELESEAAPEEAEPEEQSRVREVVGEGD
VEGAEGFPRPLPPGKGYLVHILSVGGHAVNPGGWVLTLLRKGLEKVVPQPACSAKTAQQG
DPQQDGAQILEPCGPGDAEPPGCPLETQARMQVQDSTSPPSPTPEEPAPGPQAGFQISSL
PPPRDPARLMAWFLHRLEMALPQPVLHQKAGDQEPDCPGTCDVQTISIHPGEQVEPDLVL
EEVDPHWEDTHQDGDGSSPWETEEVPVYEEEDYAMEEVPRQLSRIQEEREEEEEEEGEQE
EEEEEEEADVLLDSYLGVQADVDQSEGEAQDLRDSDQPLGPVSTCDFPASAPTAAQGWDM
ELNHLVQDQPPSHVGSGAVPPNPAEHLPNVPTYRPPITRIPVLVSRRTTLSNSNFARETR
SSIRCLASSQVPATREHPEVQVEDTDADSHPLVVEEKPPSPPRLPPPSPGLPPPSPTKTD
TLTVPRSASAALRRKLPSLDDEAEELKALSPAESPVVAWSEPTSPQDLDGQDRAASTASQ
NSAIINDRLQELVKLFKERTEKVKEKLIDPDVTSEEDSPKPSPAKKAPEPAAEAKPAEAQ
QVEEEHYCEMLCCKFKRRPWKKYQFPQSIDPLTNLMYILWLFFVVLAWNWNCWLIPVRWA
FPYQTPGNIHLWLLMDYLCDLIYLLDIVVFQMRLQFVKGGDIITDKKEMRNNYLKSQRFK
MDVFCLLPLDFLYLKFGVNPLFRLPRCLKYMAFFEFNNRLEAVLSKAYVYRVIRTTAYLL
YSLHLNSCLYYWASDYQGIGSTHWVYDGVGNSYIRCYYFAVKTLITIGGLPDPQTLFEIV
FQLLNYFTGVFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTVKYMNFYKIPRSVQRRVKT
WYEYTWHSQGMLDESELMVQLPDKMRLDLAIDVNYSIVSKVALFQGCDRQMIFDMLKRLR
SVVYLPNDYVCKKGEIGREMYIIQAGQVQVLGGPDGKSVLVTLKAGSVFGEISLLAVGGG
NRRTANVVAHGFTNLFILDKKDLNEILVHYPESQKLLRKKARRMLRKNTKPKEEKSVLIL
PPRAGTPKLFNAALAAAGKMGKGGKGGKLAHLRARLKELAALEAAARQQQLLEQAKSSQD
AAAEEAGSAAPDQPEAPSEAAPDQPAPPEPAEKPEGGEEEAARPEEPSVHIRMSPSPESG
EQILSVEVPEKKE
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgctgggctgggtgcaaaaggtgctgcctcaacccccggggactgcccagaagaccaag
gcggtggaggaggaagcagaggacgcagaaccagaaccagagctagagtctgaagcagct
cccgaggaggccgagccagaggagcagagccgggtaagagaggtggtgggcgagggggat
gtggagggtgcagagggtttcccaaggcctctgccacctggaaaaggctacctggtacac
attctcagtgttgggggtcacgccgtcaatcctggcggctgggtgctgacattactccgg
aagggcctggagaaggtggttccgcagcctgcctgcagtgccaagacagcccagcaggga
gaccctcagcaggatggagcacagatccttgagccctgtggccctggggacgcagagcct
ccaggatgtccactggaaacacaggccaggatgcaggtccaggacagcacctccccgcct
tccccaaccccggaagaaccagctccagggcctcaggctggcttccagatttcctccctg
ccgcctccgagggaccctgccaggttgatggcctggttcctgcaccggctggaaatggct
ctgcctcagccagtgctccaccagaaggctggggatcaggagcctgactgtcctgggaca
tgtgacgtgcagaccatcagcattcaccctggagaacaagtggagcctgaccttgttctg
gaagaggttgaccctcactgggaggacacccaccaggatggtgatggcagcagcccatgg
gagacagaggaagtaccagtttatgaagaagaggactatgccatggaggaggtgcctagg
cagctgtcccggatccaagaggagagagaagaggaggaggaggaggaaggagagcaggaa
gaggaggaagaagaagaggaagctgatgtcctgctggatagctatctgggggtgcaggca
gacgtggatcagagtgaaggagaagcccaggacctgcgggactcagaccagcctctaggt
cccgtctccacctgtgactttccagcctcagcccccacagctgcacaaggctgggacatg
gagctgaatcacctggtgcaggaccagccacccagccacgtgggctctggagctgtcccc
ccaaacccggcagaacacctccccaatgtgcccacctaccggccccccatcacccgcatc
ccagtcctcgtctcccggagaaccaccttgtccaactccaacttcgccagggagacacgg
agctccatccgctgcctagcctcttctcaagtgcctgccacgagagagcatcctgaggtg
caggtggaagacacagatgctgacagccacccccttgttgtggaggaaaagcccccatcg
ccccccaggctgccaccaccatcgcctgggctgccaccaccgtcgcccaccaagaccgac
acccttacagtcccgcgctcagcctcggcggccctcaggaggaagctgccctctctggat
gatgaggccgaagagctcaaggcgttgtcaccagctgagtccccagtggtggcctggtcg
gagcccacatccccgcaggaccttgatggccaggatcgggctgcctccacggccagccag
aacagcgccatcatcaacgaccggctccaggagctggtgaagctcttcaaggagcgcacg
gagaaggtcaaggagaagctaatcgaccctgatgtcacctccgaggaggacagccccaag
ccatccccagccaagaaagctccagagccagccgcggaagcaaagccagctgaggcacag
caggtggaggaggagcactactgcgagatgctgtgctgcaagttcaagcgccgcccctgg
aagaagtaccagttcccccagagtattgaccccttaaccaacctgatgtacatcctgtgg
ctgttctttgtggtgctggcctggaactggaactgctggctgattcccgtgcgctgggcc
ttcccctaccagacgccgggtaacatccacctgtggctgctgatggattatctgtgtgac
ctcatctacctcttggacatcgtcgtgttccagatgcgcctgcaatttgtcaaaggcggg
gacatcattacagacaagaaggagatgaggaacaactacctaaagtcccaacgcttcaag
atggacgtgttctgcctcctgcccttggacttcctctacttgaaatttggtgtgaacccc
ctctttcgcttgccccgctgcttaaagtacatggccttcttcgagtttaacaaccgcctg
gaagccgtcctcagcaaagcctacgtctacagggtcatcaggaccacagcctacctgctc
tacagcctgcacttgaactcttgcctttactactgggcgtctgactaccagggcattggc
tctactcactgggtttatgacggcgtggggaacagctacatccgctgctactactttgcc
gtgaagaccctcatcaccatcggtgggctgcccgacccacagaccctctttgagattgtc
ttccagctgctcaactacttcacgggtgtcttcgccttctccgtgatgattggacagatg
agagacgtggtgggggctgctacagcagggcagacctactaccgcagctgcatggacagc
acggtcaagtacatgaacttctataagatccccaggtccgtgcagaggcgcgtcaagacc
tggtatgagtacacctggcactcgcaaggcatgctggatgagtcagagctgatggtacag
ctcccggacaagatgcggctggacctggccattgatgtgaactacagcattgtcagcaag
gtggcgctcttccagggctgtgaccggcagatgatcttcgacatgctgaagaggctccgc
tctgttgtctacctgcctaatgactacgtgtgcaagaagggggagattggccgtgagatg
tacatcatccaggcggggcaagtgcaggtgctgggcggtccagatgggaagtctgtcctg
gtgacgctcaaagctggatctgtgtttggagaaatcagcttgctggctgtcgggggtggg
aatcggcgcacggccaacgtggtggctcatgggttcaccaacctcttcatcctggataag
aaggacttaaatgagatcttggtgcattatcctgagtctcagaaattactccgaaagaag
gccaggcgcatgctgaggaaaaacaccaagcccaaggaggagaagagcgtgctcattctg
ccaccccgggcgggcacccccaagctcttcaacgccgccctggctgcagcaggaaagatg
ggcaagggtgggaagggtggcaagctcgcccacctccgagcccgcctcaaggagctagcc
gcgctggaggcagctgccagacagcagcaactgctggagcaggctaagagctcgcaggac
gctgctgcggaagaggcaggctcggccgcaccggaccagcccgaggctccctcggaggcc
gcccccgaccagccggcacctccagaaccagcagagaagcccgagggaggtgaagaggag
gctgcccggccagaggaaccgtccgtgcacatccgcatgagccccagcccagagtccgga
gagcagatcctgtcggtggaggtgcctgagaaaaaggagtga
DBGET
integrated database retrieval system
