Ochotona princeps (American pika): 101527034
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Entry
101527034 CDS
T07609
Symbol
BFSP2
Name
(RefSeq) phakinin
KO
K10379
phakinin
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
opi04812
]
101527034 (BFSP2)
Cytoskeleton proteins [BR:
opi04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Others
101527034 (BFSP2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TolA_bind_tri
ATG17_like
HIP1_clath_bdg
KASH_CCD
MCPVI
ANC1_spectrin
RecA_dep_nuc
PUMA_CC
MPS2
DUF4200
Plectin_PPL
Motif
Other DBs
NCBI-GeneID:
101527034
NCBI-ProteinID:
XP_036353543
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Position
14A:complement(24601..124643)
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AA seq
378 aa
AA seq
DB search
MPFQRRRASFRGTRPSSSLESPPATRTNAMGGLIRAPGVYVGTAPNAGIGGLGARVTRRA
LGISSVFLQGLRSSGLATVPASDLERSHTAVENLGGCLVEYMAKVHALEQVSQELETQLR
THLESRAKRSGGWGALQASWASSCQQVGEAVLENARLMLQTETIQAGADDFKERYENEQP
FRKAAEEEINSLYKVIDEANSTKMDLENQIESLKEELDFLSSNYEEQAEVACTAPTQEEK
LAAALRVELHDTACQVQSLQAETESLRALKRGLENTLHDAKHWHDMELQNLGAVVSRLEA
ELGEIRAEAEQQQRERAQLLARKSQLQKDVASYHALLDREESSKANATTCTAGIAWSPGG
DNLSKWFEHIFKFLLIHE
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcccttccagaggcgcagggcgtccttcagggggacacggccttcatcttccctggag
agccccccggccaccaggaccaatgccatgggtggcctcatccgggcaccaggagtctat
gtggggacggcacccaatgcaggcataggtggcctgggtgctcgtgtgacccggcgggcc
ctgggtattagcagtgtcttcctgcagggcctgaggagctcaggtctggctacggtacct
gcttcagatctggagagaagccacactgctgtggagaacctgggaggctgtctggtggaa
tatatggccaaggtgcacgccctcgagcaagtcagccaagagctagaaacgcaactgagg
acacacctggagagcagggccaagcgttcaggaggttggggtgcactccaggcttcctgg
gccagcagctgccagcaggtgggtgaggcagtcttggaaaatgcccggctcatgttgcag
acagagaccatccaggcaggtgcggatgacttcaaggagaggtatgaaaatgagcagcca
tttcgcaaggcagcagaggaggaaattaattctctgtataaagttatcgatgaagctaac
tcaacaaaaatggatctagaaaatcaaattgagagtctgaaagaggaacttgactttttg
tccagcaactatgaagagcaggctgaagtggcctgcacggcccccacgcaggaggagaag
ctggctgctgccctcagagtggagttacacgacactgcttgccaagttcagagcctccag
gctgagacggaatctttacgggccctgaaacggggcctggagaacaccttgcatgacgcc
aagcactggcatgacatggagcttcagaacctgggcgctgtggtgagcaggttggaggcg
gaactgggtgagatccgtgcggaggcagaacagcagcagcgggagcgtgcacagctgctg
gcccgcaagagccagctgcagaaagacgtagcatcttatcacgccctgctagacagggag
gagagcagcaaagccaacgccacgacttgtaccgctggaatcgcgtggtctcctggtgga
gataacttgtccaaatggtttgagcatattttcaagttcttgctcatccacgaatag
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