Ochotona princeps (American pika): 101528992
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Entry
101528992 CDS
T07609
Symbol
AP5B1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opi03400
]
101528992 (AP5B1)
DNA repair and recombination proteins [BR:
opi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
101528992 (AP5B1)
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GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
101528992
NCBI-ProteinID:
XP_004596905
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Position
1:109765617..109768372
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AA seq
886 aa
AA seq
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MRPLSRDAWAQRLAAFRASPSAYMAGPQGEDLGRDLLNDLRNDKLSEQTKLSLLSLSLEY
SAQLWPDAQTAEAAATSLLDTLMLLPPRPLALRRPLLLAATTVLAAGGALGPASGASLRL
LPLLLGLASGCDLGGSFCPALEQRSLQATACECLRELESCRPGLLRDSLGLLRGLLGREG
PIQPLSLLLALALRHILALPPQAGTRAGLQGLLTAPAAAAAAGSCPWNWTPVENSDFALQ
CHVPNWPPVAAEGAQGLELRPEESRELRAAVAQLLDTSYLLSPVAQAQLLWLLGWALRGL
RGQLPALFKPQLARLLGAAPPVLLHAVLALKAAFGEALFTAQDEALLLRRLTLAAQHPAL
PLPTHLFYLQCLLNFPENWPLGPEGEEAAPLLLGPRLCRGLLPSPLHEPMALLARLHLLC
LLCAEDQDEEEEGGQAQSLRCYLQELLAGLQQRAALEGGPRATATLCFQASYVAACCLAG
QPAILMPLVHGLAQLYRARPVLAPHFVDLLDQVGRELGEPLKVALQQEVVSAPGRDAALG
WHLQMLAKVVDRDSQDATLRFLWAAAANCPDWHLQQALLRVCRALLGTGGGGGLADLLQA
LARQLDDPDGRDHARLYYILLSHLAGPKLGAALGPSLATPAAAAAAAATSSLVAENQGFA
ATLMVQEAAAPVRLSVGPRVTQGQLPVLRLQVEALQPVYSLELRFRVEGQLYGPLKVVHV
PCVRPGRPTSLLFLPLQPKRPAPAQLDVRAMYTTPSGLTCHAHLPPLPVTFADLFLPFPQ
PPVGSEWAFFKELWDACLPKGAESRVWCALGLQGLDTVVSRHLEPFVVVAQPPSSFCVAI
RLPPDSCLLLRLEAPQSDGVPVALRTNNWALLPLAGDYVRGLSAAG
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccctgagtcgggacgcctgggcccagcgcctggcggccttccgggccagcccc
tctgcctatatggcaggtcctcagggcgaggatttgggacgcgacctgctgaatgacctg
aggaatgacaagctgagcgagcagaccaagctgtccttgctgtccctcagcttggagtac
tcagcccagctgtggcccgacgcccagacggccgaggcggccgccacctccctgttggac
acgctgatgctccttccgcctcggcccttggccctgcggaggcctctgctcctggcggcc
actacagtcctggcggcaggaggtgcgctgggcccggcctcaggggcctcactccggctg
ctgcccctgttgctcggcctggcctccggctgcgacctgggcggaagcttctgcccggcc
ttggaacagcgttccttgcaggccacggcgtgcgagtgcctgcgtgagctggagagctgc
cggccagggctgctgcgggactcgctggggctgctgcggggcctgctgggccgagagggc
cccatccagccgctcagcctgctgctggcccttgctctgcgccatatcctggcgctgccg
ccgcaagctggaactagggccggcctgcagggcctgctcaccgctccggcagcggctgct
gctgcgggtagctgtccctggaactggacgccagttgaaaacagtgacttcgccctgcag
tgccatgtgcccaattggcccccagtggccgcggagggtgcacagggcctggagctcagg
cctgaggagtcccgggagctgagggctgcagtggcacaactcctggacacgtcctacctg
ctgtctcctgtggcccaggcccagctgctgtggctgctgggctgggccctgcgaggcctg
cggggacagctgccggcgctcttcaagcctcagctggcgcggctcctgggcgcagcgcca
cccgttctgctgcatgcagtcctggcgctcaaggcggcctttggtgaggccctgttcacg
gcccaggatgaggccctgctgctccgccgcctcaccctggccgcccagcacccagccctg
cccttgcccacccacctcttctacctgcagtgcctcctgaactttcctgaaaattggccg
ctgggtcccgagggtgaggaggcggccccgctactgctgggaccccggctgtgccgcggt
ctgctccccagcccactgcatgaacccatggccctcctggcccgcctgcacctgctgtgc
ttgctgtgtgcagaagaccaggacgaggaggaagaggggggccaggcacagagccttcga
tgctacctgcaagagctgctggctggcctgcagcagagggcagccctggagggtggcccc
agggccacagccacactctgcttccaggcgtcatatgtggctgcctgctgcctggctggg
cagcccgccatactgatgcccttggtccatggtctggcccagctgtatcgagcccggcct
gtgcttgcaccccactttgtggacctcctggaccaggtgggccgggagctgggggagccc
ctgaaggtggcgctgcagcaggaagtggtatcggcacccggcagagatgcagcgctaggc
tggcacctgcagatgttggcaaaagtggtggatagggactcccaggatgctaccctgcgt
ttcctctgggctgcagctgccaactgcccagactggcacctgcagcaggccctgctgagg
gtctgccgggctctgctaggcacgggcgggggtggtggcctggccgacttgctgcaggca
ctagccaggcagctggatgaccctgatgggcgcgaccacgcccgcctctactacatcctc
ctctcccacctggcgggacccaagctgggggcagccctgggcccttctcttgccacaccg
gcagcggcagcggcggcggcggccacttcttccctggtggctgagaatcagggcttcgct
gccaccttgatggttcaggaggctgcagctcccgtgcgactgagcgtggggccgcgggtg
acacaggggcagctcccagtgctgaggctgcaggtagaggcgctgcaacccgtgtactct
ttggagctgcgcttccgtgtggaggggcagctctacggacccctgaaggtggtccatgtg
ccctgtgtgcgccccggccgccccaccagcctgctgttcctgcccctgcagcccaagcgg
ccggcccccgcacagctggacgtccgtgccatgtacaccacacccagtggcctcacatgc
cacgcccacctgccacccctgcctgtgacctttgcggacctcttcctgccttttccccag
cccccagtggggtctgagtgggccttcttcaaggagctctgggatgcctgcctgcccaag
ggcgccgagagccgcgtgtggtgtgccctggggctgcagggactggacactgtggtgtcc
cggcacctggagcccttcgtggtggtggcccagccccccagcagcttctgcgtggccatc
cgtctgcccccagactcatgcctgttgctgcggctggaggcgccgcagtcagacggagta
cctgtggccttgcgtaccaacaactgggccttgctgcccctggctggggattacgtacgt
ggcctctcagctgcaggctga
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