Ochotona princeps (American pika): 101530174
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Entry
101530174 CDS
T07609
Symbol
PNPT1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101530174 (PNPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101530174 (PNPT1)
03016 Transfer RNA biogenesis [BR:
opi03016
]
101530174 (PNPT1)
Enzymes [BR:
opi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
101530174 (PNPT1)
Messenger RNA biogenesis [BR:
opi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
101530174 (PNPT1)
Transfer RNA biogenesis [BR:
opi03016
]
Prokaryotic type
tRNA degradation factors
101530174 (PNPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
Motif
Other DBs
NCBI-GeneID:
101530174
NCBI-ProteinID:
XP_004580350
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All DBs
Position
2:52808409..52861933
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AA seq
828 aa
AA seq
DB search
MAACRHCCSCLRLRPLGDVSLRLPGRDRALTHLQVRALWGGSGARAVAVDLGNRKLEISS
GKLARFADGCAVVQSGDTAVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRRE
IGSSDKEILTSRVIDRSIRPLFPAGYFYDTQVLCNLLAVDGINEPDVLAINGASVALSLS
DIPWNGPVGAVRIGIIDGECVVNPTRKEMSSSTLNLVVAGAPKSQIVMLEASAENILQQD
FCHAIKVGMKHTQQIIQGIQQLVREIGVSKRTPQKLFTPSPEIVKYAHTLAMEKLYAVFT
NYEHDKISRDEAVNKIRLDTEEQLKEKFPEVDPYEIIESFNVVAKEVFRSIILNEYKRCD
GRDLTSLRNISCEVDMFKTLHGSALFQRGQTQVLCTVTFDSLESSIKSDRITTAINGIKD
KNFMLHYEFPPYATNEIGKVTGTNRRELGHGALAEKALYPVIPKDFPFTIRVTSEVLESN
GSSSMASACGGSLALMDAGVPISSPVAGVAIGLVTKNNSEKGDIEDYRLLTDILGIEDYN
GDMDFKIAGTSKGITALQADIKLPGIPIKIVMEAIQQASVAKKEILQIMNKTLSKPRASR
KENGPIVETVQVPLSKRAKFVGPGGYHLKKLQAETGVTISQVDEETFSIFAPTPSAMHEA
RDFIIEICKDDQEQQLEFGAVYTATITEIRDSGVMVKLYPNMTAVLLHNSQLDHRKIKHP
SALGLEVGQEIQCAKPPQAGGNPRPEEELQTPTPGSPPLPQLTLRLVCSGSTNYAFQSPA
TKCLPTKACFGGKWEPQETFPGHLLSTERILDSRLANSITNLSDFGYD
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtgcaggcactgctgctcctgcttgcggctccggcccctgggcgatgtctcc
ctgcgactgccggggcgggatcgagcgctcacacacttgcaggtgcgagcgctgtggggt
ggctccggggcccgagccgtggcagtggacttgggcaacagaaaattagaaatatcctct
ggaaaactggccagatttgcagatggctgtgctgtagtacagtcaggtgacactgcagtg
atggtcacagcggtcagtaaaacaaaaccttcaccttcccagttcatgcctttggtggtt
gattacagacagaaggctgctgcagcaggtagaattcccacaaactatcttagaagagaa
attggttcttctgacaaagaaattcttacaagtcgtgtcatagatcgttcgattaggcct
ctctttccagctggttacttttatgatacccaggtcctttgtaatctgttagcagtagat
ggtattaatgaacctgatgtccttgcaattaatggtgcctctgtagccctctccttatca
gatattccttggaatggacctgttggggcagtacgaataggaataattgatggagaatgt
gttgttaacccaacacgaaaagaaatgtcctctagcactttgaatttagtagttgctgga
gcacccaaaagtcagattgtcatgttggaagcctctgcagaaaacattttacagcaggac
ttttgccatgctatcaaagtgggaatgaaacatacccaacaaattatccagggcatccag
cagctggtgagagaaattggtgtttccaagaggacaccgcagaagttattcaccccttcg
ccagagattgtgaaatatgctcatacacttgccatggagaaactgtatgctgtttttaca
aactatgaacatgataaaatatccagagatgaagctgttaacaagataagactagataca
gaggaacaactaaaagaaaaatttcctgaagttgatccatatgaaataatagaatccttc
aatgttgtcgcaaaggaggtttttagaagtattattttgaatgaatacaagagatgcgat
ggacgggatttgacttcacttaggaatataagctgtgaagtagatatgttcaaaactctt
catgggtcagcattatttcaaagaggacaaacacaggtgctttgtactgttacatttgat
tcattagaatccagcattaaatcagatcgaattacaacagctataaatggaataaaagat
aaaaacttcatgctacactatgagtttcctccttatgcaactaatgaaattggcaaagtc
actggaacaaatagaagagaacttgggcatggtgctcttgctgagaaagctttgtatcct
gttattcccaaagattttcctttcacgataagggtcacatctgaagtcctagagtcaaat
gggtcatcttccatggcatctgcatgtggtggaagtttagcattaatggatgcaggagtt
ccaatttcatctcctgtggcaggtgtagcaataggattggtcaccaaaaacaattctgag
aagggggacatagaggattatcgtttgctgacagatattctgggaattgaagattataat
ggtgacatggatttcaaaatagctggcaccagtaagggaataacggccttacaggctgat
attaaattgcctggcatacccataaaaattgtcatggaggccattcagcaagcctcagtg
gcaaaaaaagagatattgcagattatgaacaaaactctttcaaaacctagagcatctaga
aaagaaaacggacctattgtagaaactgttcaagttccattatcaaaacgagcaaaattt
gttggaccaggtggatatcatttaaaaaaacttcaggctgaaacaggtgtaactattagc
caggtggatgaagaaacattttctatatttgctccaacacctagtgcaatgcatgaagca
agagacttcattattgagatctgcaaagatgatcaggagcaacagttagaatttggagca
gtttataccgccacaataactgaaatcagagacagtggagtgatggtaaaactatatcca
aatatgactgcagtactacttcataattcacagcttgatcatcgaaagattaaacatccc
tctgccttgggattagaagttggccaagaaattcagtgcgcaaagcctccccaggcagga
ggcaacccacgccccgaggaggagctccaaacaccaacaccaggctccccgccgcttcct
caacttaccctcagactcgtctgctcaggaagcacaaactatgctttccaatcgcccgct
accaagtgcctgccaacaaaagcctgcttcggcgggaaatgggaacctcaggaaacattc
cctggccatttactgtccacagaacgcatcctggacagccgcttagctaactccataacg
aatctgagcgactttgggtacgactga
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