Ochotona princeps (American pika): 101530698
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Entry
101530698 CDS
T07609
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101530698 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101530698 (TTC37)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
101530698 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_16
TPR_17
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_11
TPR_9
ANAPC3
TPR_15
Fis1_TPR_C
ARM_TT21_5th
TPR_5
BTAD
TPR_30
TPR_6
ARM_TT21_C
ARM_TT21_2nd
HrpB1_HrpK
TPR_20
DUF7017
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
101530698
NCBI-ProteinID:
XP_004586254
LinkDB
All DBs
Position
11A:complement(11462848..11533461)
Genome browser
AA seq
1562 aa
AA seq
DB search
MSSKEVKTALKSARDAIKNKEYKEALKHCKTVLKQEKNNYNAWVFIGLAAAELEQPDQAL
GAYRKAAELEPDQLLAWQGLASLYEKSNHINAKDDLPRVYQKLLNLYESANKEKWCDVCK
KLVDLYHQEKKHLEVARTWHRLIKTRQEDGADNKELHQLWRKLTQLLAESTQDQNNETQQ
LLLTAFENALDLSEKIPSEDHQMLYKHFIHCLSKCPHESARLKAACEGMIDIYPAVQYPL
EVLCLHLIQSGCLTEEGQQYCCRLLEMDSKSGPGLIGLGVKALQDKKYEAAIQNLSEGLR
ESPLCTTGWYHLAEAQVKIHKPKEAVLSCNEALKHVEKLGASGSSLQQKNLCLRLKAEAL
IQAADCDSAEEAVRTLDQVSDANNVPELLVLKGLAYLNKGSLDEATKIMEDLLSSYPDLA
AVHALEALIHFTRKDYLQAEKCFQAAVEKAADVAEYHYQLGLTYWFMSEETRKDKAKALT
YFLKAAKLDTYMGKAFCYLGHYYRDVVGDKNRARGCYRKAFELDKADSEAGAAAVDLSVE
LEDMETALAILTAVTQKAGAGTAKWAWLRRGLYYLRAGQHSQAVADLQAALRADPKDFNC
WESLGEAYLSRGSYATALKSFTKASELNPESVYSVFKVAAIQQILGRYKEAIAQYQLIIK
RKEDYVPALKGLGECHLLMARAALVDFLDGKAVDHIEKALEYFTWALQHRADVSCLWKLI
GDACTCLHAVSPSKVNVRVLGVLLGQKEGKQALKKSELLHLGGRCYGRALKLMSTSNTWC
DLGINYYRQVQHLAETGSNESDLQELLEKSLHCLKKAVRLDSSNHVYWNALGVVACYSGI
GNYALAQHCFIKSIQSEQINAVAWTNLGVLYLANEHIEQAHEAFKMAQSLDPSYLICWIG
QALIAEAVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRETELYQYNILQMN
AIPAAQVVLCKYIERIQNYAPAFTMLGYLNEHLQLKKQAADAYQRAVLLSVEDKDTYNAT
VRHYGRLLCSIGEYDKAIQAFKSTPLEELEDIVGFALALFMKGLYIESGKAYEKALSVVE
SEQDKAHILTALAITEYKQGKLDAAKTLLFKCSILKEQTPESLQALCALGLAMQDATLSK
AALNELLKHSQHKGSGYQRCLLTSAIHALQGRSVAVQRQMSKAVHSNPADPALWSLLSRV
VAQHAQRNATGGAVAGTVAHILDSNHGKKALLYTAVNQLAMGSRSAKDERNIALKTIQKA
ALLAPGDPAVWAGLMAACHADDKLALVNNTPPKRMDLYLALLSAVSASIKDKEFLENYKQ
SLEKWSLSQAVTGLVDAGRTAEAEALCTKNLKSNPDQPAVVLLLRQVQCKPLLESEKLLP
DAVLEELQKTVMSNSASVPAWQWLAHVYQSQGMMGAAEMCYRKSLQVASQQGSWSGKLSS
LLRLALLALEVCRADVSSDHWPSLVQEATTEAMKLCFCPLAVLLQALLQFSRKMGARDTR
RLLERVVYQPGYPQSVVSAARWYLLRHLHAKNDYELIDVLIKNAETHSDTRALELNQKLS
SQ
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaggaagtgaagacggctctgaaaagtgccagagatgcaatcaagaacaaa
gagtacaaagaagctttgaagcattgtaagacagtgttgaaacaagagaaaaataactat
aatgcctgggtttttattgggcttgccgcagctgagctggaacagcctgaccaggctctg
ggcgcctataggaaagctgctgagctagaaccagaccagttgcttgcatggcagggatta
gcaagtttgtatgagaaaagtaatcacataaatgctaaggatgacttacccagggtttac
cagaagcttctgaatctttatgaaagtgctaataaggagaagtggtgtgatgtgtgtaag
aaacttgtggatctatatcaccaagaaaagaaacatctggaggtggctcgaacatggcac
agactgatcaagacacggcaggaagatggtgcagacaacaaggagctccatcagctgtgg
cggaagctgacccagctgctggcagagagcacccaggaccagaacaatgagacccagcag
ttgcttttaactgcatttgagaatgcactggacttgtcagagaagattccgagtgaggat
caccaaatgctttataaacatttcatccactgtttatccaaatgtcctcatgagtcggcc
cggttgaaggcggcctgtgaaggaatgatagacatctatcccgcggtgcagtatccattg
gaagtgctttgcttgcatttaattcagtcaggatgtcttactgaggagggacagcagtac
tgttgcagactgttagaaatggattcaaaaagtggtccaggccttatcggattaggtgtc
aaagcactgcaagacaagaagtatgaagctgctattcagaacctatcagaaggattaagg
gagagccctctctgcacaactggatggtatcatctggcagaagcccaagtcaaaattcat
aagcccaaggaagctgttctttcatgcaatgaagcgttgaagcatgtagagaagcttgga
gcatctgggagcagtctgcagcagaagaatctgtgtctgcgtttgaaagcagaggcgttg
attcaagctgcagactgtgactctgccgaggaagcagttcgcaccctggaccaggtttcc
gatgcaaataatgtcccagaacttctggttctcaaaggcttggcctatctgaacaaaggc
tcattggatgaagctacaaagattatggaagaccttctctcttcttatcctgacctagct
gcagtccatgccctggaagctttaattcattttaccagaaaggactacctccaagcagaa
aaatgttttcaggcagcagtggaaaaggctgctgatgttgctgaatatcattaccaactt
gggctaacatattggttcatgagtgaagaaacaagaaaagataaagcaaaggctcttacc
tactttctaaaggccgcaaaactggatacatacatgggcaaggctttctgctatttgggt
cattattaccgagacgtggttggagataaaaacagagcccgcggatgttacaggaaagct
tttgaattagacaaagcggatagtgaagcgggagctgctgcagttgacctgagtgtggag
cttgaagacatggaaacggccctagctatcctaacagcagtaactcagaaagcaggtgct
ggaacagcgaagtgggcctggcttaggcgtggactgtactatttgagagcgggtcaacat
tctcaagcagtggctgatttacaggcagcattaagggcagacccaaaggactttaattgt
tgggagtcattaggagaagcatacttaagcagagggagctatgcgacggccttgaaatcc
ttcacaaaagccagtgagctgaacccagaatccgtatacagtgtgtttaaggttgcagca
atacaacaaatcctaggcagatacaaggaggctatagctcaataccagctgatcattaaa
aggaaagaagattatgtgcctgctttgaaaggtttgggcgaatgccatctcctgatggcc
agagcagctctcgtggattttcttgatggaaaagctgtggaccacatagaaaaagcactg
gaatatttcacttgggccctgcagcaccgagctgatgtgtcctgcctttggaagctgatc
ggtgatgcctgcacctgcctgcatgctgtctccccatccaaagtgaacgtccgtgtcttg
ggagtgctactaggtcagaaggaaggaaagcaagcactaaagaaaagtgagctcctgcat
ctgggaggaaggtgttatggtcgtgcactgaagctaatgtctacttctaatacatggtgt
gatcttgggatcaattactatcgccaagtacagcaccttgcagaaacaggcagcaatgaa
agtgatcttcaagagttgctggagaaatctctacattgtctgaagaaggcggtgagactt
gacagtagtaatcacgtgtactggaatgctctcggtgtggtggcctgttacagtggtatt
ggaaattatgcccttgctcagcattgcttcatcaaatcaatccagtcagaacaaatcaat
gctgttgcatggaccaacttgggagtgttgtacctggcaaacgagcacattgagcaagct
catgaagctttcaaaatggctcagtcccttgatccatcttacttaatatgctggattgga
caagctcttattgcagaggcagttggaagttacgataccatggatctcttcaggcacacc
acagagctcagtatgcacacggagggagccataggttatgcatactgggtgtgcacaaca
ctgcaagataagagcaaccgagagacggagctgtaccagtacaacattctccagatgaat
gctatcccagcagcacaggttgtcttgtgcaaatacatagaaagaattcagaattatgct
ccagctttcacaatgttgggttacctaaatgaacacctacaattgaagaagcaagcagca
gatgcctaccaaagagcagttttgctgtctgtggaagacaaagatacatacaatgctaca
gtaagacattatggcagattgttatgttccattggtgaatatgataaagctatccaggct
tttaagtctacgccactggaagagttagaagacatcgtaggttttgcattggctttgttt
atgaaggggctgtatatagagagcggcaaagcttatgagaaagccttgtctgttgttgaa
tcagagcaagacaaagcccatatcttaacagccctggcaatcacggagtataaacaaggg
aaactggatgcagctaagacactgctgttcaaatgctctatcttaaaggaacaaacccca
gagagcctccaagcactgtgtgctctgggcttggccatgcaggacgccacgctgtcgaaa
gcagcccttaatgagttactgaagcacagccagcacaaaggcagtggttaccagaggtgc
cttctgacctcagccatccacgccctgcaaggccgcagcgtggcggtgcaacggcagatg
tccaaggccgtccacagtaatcctgctgaccctgcgctttggtctctgttgtcccgtgtt
gttgctcagcatgcccaacgaaatgcaacgggaggtgctgtggctggaactgtggctcat
attctggactcaaatcatgggaagaaggcactactgtacactgcggtcaaccagttggcg
atgggaagcaggtcagcaaaagatgagagaaatattgctctgaagaccattcagaaagca
gcccttcttgctccaggtgaccctgctgtctgggctgggctcatggcagcatgtcatgcc
gatgataaactggctttggtgaacaacactcccccgaagaggatggatttatatttggcc
ctgctgtctgctgtttctgcttcaattaaagacaaagaattccttgaaaattacaagcag
tctcttgaaaagtggtccctgtcacaggctgtcactggtctagtcgacgctggaagaaca
gctgaggccgaagctctctgcacaaagaatttgaagagtaatcctgatcagccagctgtt
gttttgcttttgagacaagttcaatgtaaacctctcctggagtccgagaagcttcttcca
gatgctgtcctggaagaactgcagaagacagtgatgtccaactcggcctcggttccagcg
tggcagtggctggctcatgtctatcagtcacagggaatgatgggtgctgccgagatgtgc
tacaggaagagtctccaagtggcctcgcagcagggcagctggagcgggaagctctcgagt
ctgctgagactcgccctgcttgccctcgaagtctgcagggctgatgtttccagtgaccac
tggccatcgttggttcaagaggctaccaccgaagccatgaaactttgtttttgtccattg
gctgttcttttacaagccttgttacagttcagtcgcaaaatgggggcaagagacacacgg
cgactgctggagagagtggtctatcaacctggatacccccagtctgtggtatcagctgcg
cgttggtatctgctgcgacacctgcatgccaaaaatgactatgagctcattgacgtgctg
atcaagaacgcagaaacccacagcgatacaagggcattggaactgaatcagaaattatcc
tcacaatag
DBGET
integrated database retrieval system
