Ochotona princeps (American pika): 101533134 Help Entry 101533134         CDS       T07609                                  Symbol CAPN1 Name (RefSeq) calpain-1 catalytic subunit   KO K01367   calpain-1 [EC:3.4.22.52] Organism opi  Ochotona princeps (American pika) Pathway opi04141   Protein processing in endoplasmic reticulum opi04210   Apoptosis opi04217   Necroptosis opi04218   Cellular senescence opi04382   Cornified envelope formation opi05010   Alzheimer disease opi05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:opi00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     101533134 (CAPN1)  09140 Cellular Processes   09143 Cell growth and death    04210 Apoptosis     101533134 (CAPN1)    04217 Necroptosis     101533134 (CAPN1)    04218 Cellular senescence     101533134 (CAPN1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     101533134 (CAPN1)  09160 Human Diseases   09164 Neurodegenerative disease    05010 Alzheimer disease     101533134 (CAPN1)    05022 Pathways of neurodegeneration - multiple diseases     101533134 (CAPN1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:opi01002]     101533134 (CAPN1) Enzymes [BR:opi01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.22  Cysteine endopeptidases     3.4.22.52  calpain-1      101533134 (CAPN1) Peptidases and inhibitors [BR:opi01002]  Cysteine peptidases   Family C2: calpain family    101533134 (CAPN1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_C2 Calpain_III EF-hand_6 EF-hand_1 EF-hand_8 EF-hand_7 CAPN13-like_C_EFh EF-hand_5 Motif Other DBs NCBI-GeneID:  101533134 NCBI-ProteinID:  XP_004596743 LinkDB All DBs Position 1:109355769..109373096 Genome browser AA seq 714 aa AA seqDB search MAEEIITPVYCTGVSAQLQKHRAKELGLGRHENAIKYLGQDYEQLRARCLQSGALFRDDA FPPVPQSLGYKELGPNSSKTYGIKWKRPTELLSNPQFIVDGATRTDICQGALGDCWLLAA IASLTLNDTLLHRVVPHGQSFQNGYAGIFHFQLWQFGEWVDVVVDDLLPTKDGKLVFVHS AQGNEFWSALLEKAYAKVNGSYEALSGGSTSEGFEDFTGGVTEWYELRKAPSDLYQIILK ALERGSLLGCSIDISSVLDMEAVTFKKLVKGHAYSVTGAKQVNYQGQTVNLIRMRNPWGE VEWTGAWSDGSPEWNYVDPYEREQLRVKMEDGEFWMSFRDFMREFTRLEICNLTPDALKS RTIRKWNTTLYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLEEVDDQDDYGSRESGCSFV LALMQKHRRRERRFGRDMETIGFAVYEVPPELVGQPALHLKRDFFLANASRARSEQFINL REVSTRFRLPPGEYVVVPSTFEPNKEGDFVLRFFSEKRAGTEELDDQIQANLPDEQVLSE EEIDENFKALFRQLAGEDMEISVRELQTILNRIISKHKDLRTKGFSLESCRSMVNLMDRD GNGKLGLVEFNVLWNRIRNYLAVFRKFDLDKSGSMSAYEMRMAIESAGFKLNKKLYELII TRYSEPDLAVDFDNFVCCLVRLETMFRFFKTLDTDLDGVVTFDLFKWLQLTMFA NT seq 2145 nt NT seq  +upstreamnt  +downstreamnt atggccgaggagatcatcacgccggtctactgcacgggagtgtccgcccaactccagaag caccgggccaaggagctgggcctgggccgccatgagaatgccatcaagtacctgggccag gattatgagcagctgcgggctcgctgcctgcaaagcggggcccttttccgggacgacgcc ttccccccggttccccagagcctgggctacaaggaactggggcccaattcgtccaagacc tatggaatcaaatggaagcgccccacggagctgctgtcaaacccccagtttatcgtggat ggagccacccgcacagacatctgccagggcgcactgggggactgctggctcctggctgcc atcgcctccctcaccctcaatgacaccctgctacaccgagttgtccctcacggccagagt ttccagaacggctacgccggcatcttccacttccagctgtggcaatttggagagtgggtg gacgtggtagtggacgacctgctgcccaccaaggatggcaagctggtattcgtgcactct gcccagggcaacgagttctggagcgccctgctcgagaaggcctatgccaaggtgaatggc agctatgaggccctgtcagggggcagcacctcggagggcttcgaggacttcacgggtggc gtcaccgagtggtacgagctgcgcaaggcccctagtgacctgtaccagatcatcctgaag gcactggagcgcggctcccttctgggctgctccatcgacatctccagcgttcttgacatg gaggctgtcacctttaagaagctagtgaagggccatgcctactcagtgactggtgccaaa caggtgaactaccagggccagacggtaaacctgatccggatgcggaacccctggggcgag gtggagtggacaggagcatggagtgatggttcccccgagtggaactacgtggacccatac gagcgggagcagctccgcgtcaaaatggaagatggagagttctggatgtccttccgagac ttcatgcgtgagttcacccgcctggaaatctgcaacctgacgcccgacgcgctcaagagc cggaccatccgcaagtggaacaccacgctgtacgagggcacctggcggcggggcagcacg gcgggcggctgccgcaactacccagccaccttctgggtgaacccccagtttaagatccgg ctggaggaggtggacgaccaggacgactacggcagccgcgagtctggctgcagttttgtg ctggcgctcatgcagaagcaccgccgccgagagcgccgcttcggccgcgacatggagacc atcggctttgctgtgtatgaggtccctccagagctggtgggccagcccgccctgcacctg aagcgcgacttcttcctggccaacgcgtccagggcgcgctcggagcagtttatcaacctg cgcgaggtcagcacccgcttccgcctgccacctggggagtacgtggtggtgccctccacc ttcgagcccaacaaggaaggcgacttcgtgctgcgcttcttctccgagaagagggcaggg accgaggagctggatgaccagatccaggccaatctccctgatgagcaagtgctctccgaa gaggagattgacgagaacttcaaggccctcttccgacagctggcaggggaggacatggag atcagtgtacgggaactccagaccatcctcaacagaatcatcagcaaacacaaggacctg cggaccaagggcttcagcctggagtcgtgccgaagcatggtgaacctcatggatcgtgat ggcaatgggaaactgggcctggtggagttcaatgtcctgtggaatcgtatccggaactat ctggccgtcttccgaaagtttgacctggacaagtcgggcagcatgagcgcctatgagatg cgcatggccattgagtctgcaggcttcaagctcaacaaaaagctgtatgagctcatcatc acgcgctactcagagccagacctggcagtggacttcgacaactttgtgtgctgcctggtg cgactggagaccatgttccggttttttaagactctggacaccgacctggatggagttgtg acctttgacctgttcaagtggctgcagctgaccatgttcgcctga

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