Ornithobacterium rhinotracheale ORT-UMN 88: Q785_05360
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Entry
Q785_05360 CDS
T03303
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
ori
Ornithobacterium rhinotracheale ORT-UMN 88
Brite
KEGG Orthology (KO) [BR:
ori00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ori03016
]
Q785_05360 (gidA)
03036 Chromosome and associated proteins [BR:
ori03036
]
Q785_05360 (gidA)
Transfer RNA biogenesis [BR:
ori03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Q785_05360 (gidA)
Prokaryotic type
Q785_05360 (gidA)
Chromosome and associated proteins [BR:
ori03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
Q785_05360 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
Pyr_redox_2
FAD_binding_2
Pyr_redox
AlaDh_PNT_C
HI0933_like
DAO
EppA_BapA
CCB1
NAD_binding_8
Pyr_redox_3
ThiF
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AIP99246
LinkDB
All DBs
Position
1085656..1087530
Genome browser
AA seq
624 aa
AA seq
DB search
MIFTQAYDVIVVGGGHAGCEAAAAAANMGCKTLLVTMNLQNIGQMSCNPAMGGIAKGQIV
REIDALGGYSGIVTDYTMIQHKMLNMSKGPAMWSPRAQSDRMRFAEKWRLMLEQTENLDF
YQEMVKGLLFDENQKICGVVTNIGVEIKAKSVILTNGTFLNGLIHVGTKQFGGGRMGEGA
ARGITEQLAELGFETGRMKTGTPPRVDARSLDYSKMIEQPGDENPQKFSFTETPKLEKQR
SCYMTYTNPEVHEILRSGFDRSPMFNGTIESVGPRYCPSIEDKINRFSHRDRHQIFVEPE
GWETIEVYVNGFSTSLPEEVQAEALRKIPGFENAKIFRPGYAIEYDYFPPTQLKHTLETK
LIENLYFAGQINGTTGYEEAACQGLMAGINAALKVQGREPFVLKRNEAYIGVLIDDLITK
GTEEPYRMFTSRAEFRILLRQDNADERLTPLGYDLGLASQARLDRMHQKYERTAQLIKFI
QNTSVLPEEINPILDKKGGNPISQSMKMDGIVKRPEISLDDLKDLKAFQQYFQENEFDQE
AWQQTEIQIKYEGYIKKEEENAMKLNRLEYVKIPEDFDFMQIQSISMEGRQKLQKIKPAT
IAQASRISGVSPSDISILLIHLGR
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgatttttactcaagcatacgatgttatagttgtaggtggtgggcatgctggttgcgag
gcagcagctgctgcagccaatatgggatgtaaaacgctacttgtaaccatgaatttgcaa
aacatagggcaaatgtcttgtaatcctgccatgggcgggatagccaaagggcaaatcgtt
cgagagatagatgcgctcggtggatattctggaattgttaccgattacacaatgattcag
cacaagatgctgaacatgtccaaaggtcctgcgatgtggtcgccaagagcacaatccgat
cgcatgcgttttgcagaaaaatggagattgatgcttgagcaaacagaaaatctagacttt
tatcaagaaatggtgaaaggacttttgtttgacgaaaatcaaaaaatctgtggtgtagtt
acaaatattggtgtagagattaaagctaaatctgtaatcttgaccaatggtactttttta
aatggtttaatccatgttgggacaaaacaattcggtggaggaagaatgggagagggtgct
gcacgcggcatcacagaacaattagccgaattaggttttgaaacaggaagaatgaaaaca
ggaacaccccctcgcgtggatgcaagaagtttagattattctaaaatgattgagcaacct
ggtgacgaaaatccacaaaaattctcttttaccgaaacccctaaattagaaaaacagcgt
tcctgctatatgacttataccaatcctgaggtgcatgaaattttgcgttcaggattcgat
cgttcgcctatgttcaatggaacgatagaaagtgtaggtcctagatattgcccgtcgatt
gaagataaaattaatcgtttttctcaccgcgatagacatcaaatttttgtggaacccgaa
ggctgggaaaccatcgaagtttatgtcaatggattttcaacctccttgccagaagaagtg
caagccgaagctttgcgtaaaattccaggatttgaaaacgcaaaaatctttagaccaggt
tatgcaatagagtacgactacttccctcctactcaattaaaacatacactcgaaactaaa
ttaatagagaatttatattttgcaggacaaatcaacggaaccacagggtatgaagaagca
gcttgtcaaggtttaatggcgggaatcaatgcggcactcaaagtacaagggagagagcct
tttgttttgaaaagaaacgaagcctatataggagttttaatagatgatttaattaccaaa
ggaaccgaggagccatatcgcatgtttacctctcgtgccgaatttagaattttgcttaga
caagataatgctgatgaaagattaacgccacttggttatgatttaggtttagcctctcaa
gcacgccttgatcgcatgcaccaaaaatatgagcgtactgcacaattgattaaatttata
cagaatacttctgtgttgccagaagaaatcaacccgattttagataaaaaaggcggaaat
ccaatttctcaaagtatgaaaatggacggaattgtgaaacgccccgaaatcagtttagat
gatttaaaagatttaaaagcctttcaacaatattttcaagaaaatgaatttgatcaagaa
gcttggcaacaaaccgaaattcaaatcaagtacgaaggatatatcaaaaaagaagaagaa
aatgccatgaagttaaatcgactagaatatgtgaaaattccagaagatttcgattttatg
caaattcaaagcatctcgatggaaggtcgccaaaaattgcaaaaaataaaaccagcaacc
attgcacaagcttcgagaatcagtggagtatctccttcggacattagtattttattaatt
catttaggtcgataa
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