Odobenus rosmarus divergens (Pacific walrus): 101376929
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Entry
101376929 CDS
T05148
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
101376929 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oro03400
]
101376929 (LIG4)
Enzymes [BR:
oro01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
101376929 (LIG4)
DNA repair and recombination proteins [BR:
oro03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
101376929 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
LIG3_BRCT
ATG17_like
Motif
Other DBs
NCBI-GeneID:
101376929
NCBI-ProteinID:
XP_004406013
UniProt:
A0A2U3WC19
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MAASQTSQTVASHVPFADLCSTLERIQRSRGRAEKIRHFREFLDSWRRFHDALHKNQKDV
RDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKEGKDALKLLNYRTPTGPRG
DAGDFATIAYFVLKPRCLQKGSLTIQQVNDILDSIASNNSARRKDLIKKSLLQLISQSSA
LEQKWLIRMIVKDLKLGFSEQSVFSVFHNDAVELHNVTTDLEKVCRQLHDPSIGLSDISI
TLFSAFKPMLAAMADTEQIEKAMKHQSFYIETKLDGERMQMHKQGDAYQYFSRHGFNYTD
QFGNSPQEGSLTPFIHSAFKTDVQICILDGEMMAFNPNTQTFMQKGNKFDIKRMVEDSEL
QTCYCVFDVLMVNNKKLGHEILKKRYEILTSVFTPVPGRIEMVQKTQAHTQKEVIDALNE
AIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVDGLMDELDILIVGGYWGKGSRGGMM
SHFLCAVAEKPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLAQHWKPFHRKAPPSNILC
GTEKPEVYIEPCHSVIVQVKATEIVPSDMYKTGCTLRFPRIERIREDKEWRECTTLDDLE
QLRGKASGKLASKHLYVGDDDGPQEKKRKAAPKVKKAIGIIEHLKAPNLSNVNKISNIFE
DVEFCVMNGMDSHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSNKHDV
VKPEWLLECFKTKSCVPWQPRFMIHMCPSTKEHFAREYDCYGDSYFVDTDLNQLKEVFSG
IKNSSAQTPGEMASVIANLEYRYSWDRSPLSMFRHHIIYLDLYAVINDLSTKIEGTRLAV
TALELRFHGAKVVSRLAQGVSHVIIGEDQSRVADLKAFRRTLKRKFKILQQGWVTDSIDK
CELQEENLYLV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacagacttcgcaaactgttgcatctcacgttccttttgcagacttgtgt
tcaactttagaacgaatacagagaagtagaggacgtgcagaaaaaatcagacacttcagg
gaatttttagattcttggagaagatttcacgatgcccttcataagaaccaaaaggatgtc
agggactccttttatccagcaatgagacttattcttcctcagctagaaagagagaggatg
gcctacggaatcaaagaaactatgcttgctaaactttatatcgaattgcttaatttacct
aaagaaggaaaagacgcccttaaacttttaaattatagaacgcccaccgggcctcgtgga
gatgctggagactttgcaacaattgcatattttgtgttgaaaccaagatgcttgcagaaa
ggaagtttaaccatacagcaggtaaatgacattttagactcaattgccagcaataattct
gccagaagaaaggacctaataaagaagagtcttcttcagctaataagtcagagttcagca
ctggaacaaaagtggcttatacggatgattgtaaaggacttaaaacttggtttcagtgag
cagtctgtattttctgttttccataatgatgctgtcgagttgcataatgtcaccacagat
ctggagaaagtctgtaggcaactgcatgatccttccataggactcagtgacatttccatc
actttattctctgccttcaaaccaatgctggctgctatggcagatactgagcaaatcgag
aaggccatgaaacaccaaagtttctacattgaaaccaagctagacggtgagcgtatgcag
atgcacaaacagggggatgcgtatcagtacttctcccgacatggttttaactatacggat
cagttcggcaattctccccaggaaggttctctcacaccgttcattcacagtgcatttaaa
acagacgtacagatctgtatcctggatggagagatgatggccttcaatcctaacacacag
acttttatgcaaaaggggaataagtttgatatcaaaagaatggtggaggattctgagctg
caaacttgttattgtgtgtttgatgtactgatggttaataataaaaagctaggacatgag
atcctgaaaaagaggtatgaaattcttactagtgtttttacaccagtaccaggtagaata
gaaatggtgcaaaaaacacaagctcatactcagaaagaagtgatcgacgctttgaatgaa
gccatagataaaagggaagagggaatcatgataaaacagcctctgtctatttacaagcca
gacaaaagaggcgaaggatggttgaaaattaaaccagagtacgtggacgggctgatggat
gagctggacatcttaattgtcgggggctactggggtaaaggttcccgaggtgggatgatg
tctcattttttgtgtgctgtagcagagaagcctcctcctggtgaaaaaccgtcagtgttt
catactctgtgtcgtgttggttcgggttataccatgaaagagctgtacgatctgggtttg
aaattggcccagcattggaagccttttcatagaaaagctccaccaagcaacattttgtgt
ggaacagagaagcctgaggtgtacatcgagccttgtcattctgtcattgttcaagtgaag
gccacagagatcgtccccagtgatatgtataaaactggctgcacactgcgttttccacga
atcgagaggataagggaagacaaagagtggcgcgaatgcaccaccctggatgacttagaa
cagcttcgtgggaaagcatcggggaagcttgcatccaaacacctgtacgttggggatgat
gacggaccacaggagaagaagaggaaagctgccccgaaggtgaagaaagctattggaatt
atcgagcacttaaaagcacccaacctttctaatgtaaacaaaatttctaatatatttgaa
gatgtggagttctgtgtcatgaacggaatggacagccatccgaagcctgatctggagaac
agaattgcagaatttggtggttatatagtacaaaacccaggtccagacacgtactgcgtg
attgcagggtccgagaacatcagagtgaaaaacataatttcttcgaataaacatgatgtt
gtcaagcccgagtggctgttggagtgttttaagaccaaaagctgcgtgccgtggcagcct
cgctttatgattcatatgtgcccatcaacaaaggaacattttgcccgtgaatatgactgt
tacggtgacagttattttgttgatacagatttgaaccaactgaaggaagtgttctcagga
attaaaaattccagcgcacaaactcctggagaaatggcttctgtgattgctaatttagag
tatcggtattcctgggaccgttcccctctcagtatgtttcgacaccacattatttatttg
gacttgtatgctgttattaatgacttgagtaccaaaatcgagggaacgagattagctgtt
acagctctggagcttcgatttcatggagccaaagtagtttctcgtttagctcagggagtg
tctcatgtaatcattggggaggatcagagtcgtgttgcagatttaaaagcttttcgaaga
actcttaagagaaagtttaaaatcctgcaacaaggttgggtaactgattcaatagacaag
tgtgagttgcaggaggaaaatctatatttggtttaa
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