Occallatibacter riparius: MOP44_02905
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Entry
MOP44_02905 CDS
T08486
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
orp
Occallatibacter riparius
Pathway
orp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
orp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MOP44_02905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
orp03019
]
MOP44_02905
03400 DNA repair and recombination proteins [BR:
orp03400
]
MOP44_02905
Enzymes [BR:
orp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MOP44_02905
Messenger RNA biogenesis [BR:
orp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MOP44_02905
DNA repair and recombination proteins [BR:
orp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MOP44_02905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
TniB
MGS
DUF7343
AAA_22
TrmB
Motif
Other DBs
NCBI-ProteinID:
UWZ84896
UniProt:
A0A9J7BQC7
LinkDB
All DBs
Position
complement(763082..764551)
Genome browser
AA seq
489 aa
AA seq
DB search
MSKTNRNVIDIAGAARKLLGFQSLRPGQHDAIQSLLEGRDTVLVQPTGSGKSAVYQIAGA
LLEGATVIVSPLIALQKDQADAIEASRLEATAVVNSTLSASEQREVLDRIEQGKVQYIFL
APEQLRKPETIERLRAANVSLIAIDEAHCISQWGHDFRPDYLGLCQVIEALDHPLVLAMT
ATASREVRGEIIERLGLQNPRVFVHGFDRPNISLRVDLFSNKDEKCASLLRRVEFAEKPG
IVYVSTHKHAEDIAADLQRMGVDALCYHGGLKAKQREEIQNKFMNGEVPVIVATNAFGMG
VDKPDIRFVFHADVSDSLDAYYQEIGRAGRDGEEAEAVLFYRPQDISAQQFKTGPAHVDS
EGLESVYNTLIAMRGPMTRDEIVLETGINARKLVGLLHRLEETEAIRHLDNGDYEATSSR
PLSQVIEAAAENQKFQKDLRKQRLQKMQSYAEWRSCRREYLLRYFGDDYAGPCGNCDRCE
ELRLMPKAA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaccaatcggaacgttattgatatcgcaggcgcggccagaaagctcctcgga
ttccagtcgcttcgtcctggtcagcatgacgccatccagtcgctgcttgagggccgcgac
accgtgctcgtgcaacccacgggctccggcaaatccgccgtctaccagatcgccggtgcg
ctgcttgagggtgccacagtcatagtctcgccgctcatcgcattgcagaaagaccaggcc
gatgccatcgaagccagccggctcgaggctaccgccgtggtcaattccactctgtcagct
agcgaacagcgcgaagtcctcgaccgcatcgagcagggaaaggtgcaatacatcttccta
gcccccgagcagcttcgcaagcccgaaaccatcgaacgcctgcgcgccgccaacgtctcg
ctcatcgctattgatgaagcgcactgcatcagccagtggggtcatgacttccgtcccgac
tatctcggcctgtgtcaggtcattgaagcgctcgatcatcccctcgtgttggccatgacc
gcgacggcttcgcgcgaagtgcgcggcgaaattatcgaacgtctcggcctgcagaatccg
cgcgtcttcgtgcacggatttgatcggcctaacatctcgctgcgcgtcgaccttttctcg
aataaagacgagaagtgtgcttccttgctgcgccgtgtcgagttcgcagagaagcccggt
atcgtctacgtttcgacccacaagcacgccgaagacattgccgctgatctgcaacgaatg
ggcgtagacgcgctctgttatcacggcggcctcaaagcgaagcagcgcgaagagatacag
aacaagttcatgaacggcgaagttccagtcatcgtcgccaccaatgcattcgggatgggc
gtcgacaagccggacatccgcttcgtctttcatgccgacgtcagcgactcgctggacgcc
tactaccaggagatcgggcgcgccggccgcgacggagaagaagccgaagccgtgctcttc
tatcgtccccaggacatctccgcacagcaattcaaaaccggaccggcgcacgtcgactcc
gaaggcctcgagtccgtctacaacacgctcatcgcgatgagaggccccatgacccgcgat
gagatcgtcctcgagactggcatcaacgcgcgcaagctcgtcggactgctgcacaggctt
gaggagacagaggccattcgccatctcgacaacggcgactatgaagcgaccagcagccgc
ccgctgtcgcaggtaatcgaggctgcagcggaaaatcagaagttccagaaggatctgcgc
aagcagcgcctgcagaagatgcagagctacgcggaatggcgctcctgtcgccgcgagtat
ctgctccgctacttcggcgacgactacgccggcccctgcggcaactgcgaccgctgcgag
gaactgcgcctcatgcccaaggctgcttga
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