Oryza sativa japonica (Japanese rice) (RefSeq): 107275619
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Entry
107275619 CDS
T01015
Name
(RefSeq) alpha-L-fucosidase 2-like
KO
K15923
alpha-L-fucosidase 2 [EC:
3.2.1.51
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
107275619
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
107275619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hyd_65N_2
Motif
Other DBs
NCBI-GeneID:
107275619
NCBI-ProteinID:
XP_015613078
UniProt:
Q109U3
A0A8J8YIR0
LinkDB
All DBs
Position
10:complement(9861168..9868097)
Genome browser
AA seq
815 aa
AA seq
DB search
MDGDGWVWVRRPADDDEEERPLKVVFDSPAEHFTDAAPIGNGSLGAMVWGSVASEKLQLN
HDTLWTGVPGNYTDPNAPYALAVVRKLVDGEKFVDATEAASGLFGGPTEVYQPLGDINLE
FDSSSLGYTSYKRELDLRTATVCISYNIGEVQYSREHFCSNPHQVFATKISANKSGHVSF
TLSLNSQLNHNVRITNANEMIMQGTCPGRRPALHHNGANDAIGIKFATAVGLQIGGTSAK
VTIIDDQKLRIDAADWVVLLVAAASSFDGPFVNPSESKLNPEVAALNTLNISRNATFSQL
KAAHLEDYQGLFHRVTLQLSQASMLEKDILEEVDHDVKTTAERINSFRSDEDPSLVELLF
QYGRYLLISSSRPGTQVSNLQGIWNQDFAPAWEASPHLNINLEMNYWPTLPCNLTECQEP
LFDLIGSLAVNGTKTAKVNYQASGWVTHHVTDIWAKSSAYYVDAMYALWPMGGAWLCTHL
WENYQYSLDKEFLEKRAYPLLEGCAMFLIDWLIKGPGDYLETNPSTSPEHPFIAPGTGGH
LASVSYSTTMDISIIREVFLAVISSAEVLGKSDTNLVERIKKALPMLPPVKISKDGTIME
WAQDFEDPEVHHRHLSHLFGLYPGHTITMQKNPEVCKAVANSLHKRGEDGPGWSTTWKMA
LWARLLNSENAYRMILKLITLVPPGGKVDFEGGLYTNLWTAHPPFQIDANFGFTAAIAEM
LLQSTHGDADLYLLPALPREKWPKGYVKGLRARGNVTVNISWEKGELQEATVWSSNPKCT
LRLHYGEQVAMVTVLGGNVYRFNGGLQCVETYMAP
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgacggctgggtctgggtgcggcggccggccgacgacgacgaggaggagcgg
ccgctgaaggtggtgttcgactccccggccgagcacttcacggacgcggcgcccatcggg
aacggcagcctcggagccatggtctggggcagcgtcgcctccgagaagctccagctcaac
catgataccctttggaccggcgtgcctgggaactacactgacccaaatgcgccatacgca
ctcgctgttgtgaggaagctcgttgatggagagaagtttgttgatgctacagaggctgcc
tctggccttttcggtggtccaacagaggtttaccaacctcttggagacataaatctggag
tttgactcatctagtctggggtatacttcttacaaaagagagctagatctacgtactgca
actgtttgcatcagctataatattggggaagttcagtacagtagagagcacttctgctca
aatccacaccaggtttttgccaccaagatctctgctaacaaatcaggacatgtttctttc
actttatccttaaacagtcaactaaaccacaatgttcggataacaaatgcaaatgagatg
attatgcaaggtacatgtccaggacgaagacctgcactgcatcacaatggggccaacgat
gctattggcatcaagtttgcaactgctgttgggctgcagattggtggcacttccgcaaaa
gtcacaattattgatgatcaaaagttaagaattgatgctgcagattgggttgttttgctg
gttgcagctgcttcctcattcgatgggcctttcgtgaatccttcagagtcaaaattaaac
cctgaagtagctgctctaaatacattgaatatcagcaggaatgctacattttctcagctc
aaagctgctcatttggaagattatcagggtctttttcaccgtgtaactctgcaactatcg
caagcatcaatgcttgagaaagatatcttggaagaagttgatcatgacgtaaagactaca
gcagaaagaattaattcctttagaagcgatgaggatccttctttggtcgaattgttattt
cagtatggtcgctacctgctcatttcctcctctcggcctgggacacaggtatctaatctg
caaggaatatggaaccaagattttgcacctgcttgggaggcttctcctcacctgaacata
aaccttgagatgaattactggccaacacttccttgtaaccttactgaatgccaagaacca
ctatttgacttgataggatctcttgcggttaatggaacaaaaacagcaaaagtcaattac
caagcgagtggctgggtaactcatcacgtcacggacatatgggcaaaatcatctgcatat
tacgtagatgcgatgtatgcattgtggccaatggggggtgcctggctgtgtacacatctt
tgggaaaactaccagtattcactggacaaagaatttttggagaaaagagcatatccatta
ctggagggatgtgcaatgtttttaattgattggttgatcaagggaccaggagactatttg
gaaacaaatccatctacttctccagagcatcctttcatagctcctggtactggtggtcac
cttgctagtgtgagctattcaactacaatggacatctctattatccgtgaagttttcctg
gctgtcatttcgtctgcagaggtcttgggaaaatctgatactaatctggttgaaaggatc
aagaaggcactcccaatgctccctccagttaaaatttctaaagatggcacgatcatggaa
tgggcacaagatttcgaggacccagaagtccatcatagacacctgtcacatctgtttggt
ctttaccctggtcatactataaccatgcagaaaaatcctgaggtttgcaaagctgttgcc
aatagtctccacaaacgaggggaagatggccctggatggtcgaccacatggaagatggca
ctgtgggcacgccttctgaatagtgagaatgcatacaggatgatcctaaagttgatcacc
ttggttcctcctggtggcaaggttgactttgagggaggattgtataccaatctttggaca
gcacacccacccttccaaattgatgcaaattttggattcacagctgcaattgctgaaatg
ctgctccagagcacccatggtgatgctgatctctacttgctaccagcactgccgcgcgaa
aagtggcccaaaggctacgtgaagggattgagggctcgcggcaatgtgactgtgaacatc
agctgggagaaaggggagctgcaagaagcaacggtgtggtctagcaacccaaaatgcacc
ctgaggctgcactacggtgaacaagttgctatggtgacagttttagggggcaatgtttac
aggttcaatgggggtttgcagtgcgtggagacatacatggccccttga
Oryza sativa japonica (Japanese rice) (RefSeq): 4347611
Help
Entry
4347611 CDS
T01015
Name
(RefSeq) putative alpha-L-fucosidase 1
KO
K01206
alpha-L-fucosidase [EC:
3.2.1.51
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
4347611
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osa04147
]
4347611
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
4347611
Exosome [BR:
osa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
4347611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha_L_fucos
F5_F8_type_C
GHL6
Motif
Other DBs
NCBI-GeneID:
4347611
NCBI-ProteinID:
XP_015610897
UniProt:
Q0J098
Q650T8
LinkDB
All DBs
Position
9:complement(20348941..20350966)
Genome browser
AA seq
494 aa
AA seq
DB search
MMGRCASPLCALAAALIAAVVAATSSSLAEATATPPLPVLPVPTAAQLRWQRREVIMFFH
FGMNTFTDSEWGTGREPPAAFRPAALDASQWMDAAAAAGASLVVLVAKHHDGFCLWPSAH
TAHSVRASPWRGGRGDVVREFADAARARGLDIGIYLSPWDRHDKRYGREVAYNEYYLAQL
HELLTGYGSVSEIWFDGAKGKNATNMTYHFQEWFQTVRQLQSSINIFSDDGPDLRWVGDE
NGSAGSTCWSTINRSKITIGEAGIEKYLNTGDPRGKDWVPPECDVSIRPGWFWHKNETAK
PLPELLEVYYNSVGRNCVLLLNAPPNTTGLVDAADIARLREFRTAVTAIFGTDLAAGSAA
RASSERGGRFAAANVLDGRDDTYWAPAAAEAEDGGGYWIELRRPASAAARKFNVVRIQEH
VAMGQRVERHEVYVDGGGAAVASGTTVGHKRLHRLGAPVAGRTVRVWLASRRGPPLLSAV
GLHLDPFAAGGGTM
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtcggtgcgcgtcgccgctttgcgctctcgccgccgcgctgatcgccgccgtt
gtggcggccacatcgtcgtcgttggcggaggcgacggcgacgccgccgctgccggtgctg
ccggtgccgacggcggcgcagctgaggtggcagcggcgggaggtgatcatgttcttccac
ttcgggatgaacacgttcacggactccgagtggggcacggggcgggagccgccggcggcg
ttccgcccggcggcgctggacgcgtcgcagtggatggacgcggcggccgcggcgggcgcg
tcgctcgtcgtcctcgtcgccaagcaccacgacgggttctgcctctggccgtccgcgcac
acggcgcactccgtccgcgccagcccgtggcgcggcggccgcggcgacgtcgtgcgggag
ttcgccgacgccgcgcgcgcccgcggcctcgacatcgggatctacctctcgccgtgggat
cgccacgacaagcggtacggccgcgaggtcgcctacaacgagtactacctcgcccagctc
cacgagctcctcactgggtacgggagcgtgtcggagatatggttcgacggcgccaagggg
aagaacgcgacgaacatgacgtaccatttccaggagtggttccagacggtgcggcagctg
cagagctccatcaacatcttctccgacgacggccccgacctccggtgggtcggcgacgag
aatggctccgccggatccacctgctggtccaccatcaaccgctccaagatcaccatcggc
gaggccggcatcgagaagtacctgaacaccggcgacccgagggggaaggactgggtgccg
ccggagtgcgacgtgtcgatccggccggggtggttctggcacaagaacgagacggcgaag
ccgctgccggagctgctcgaggtatactacaactcggtgggccgcaactgcgtgctgctg
ctgaacgcgccgccgaacaccacgggcctcgtcgacgccgccgacatcgccaggctgcgc
gagttccgcaccgccgtgacggccatcttcggcaccgacctcgccgcgggcagcgcggcg
agggcgagcagcgagcgcggcggcaggttcgcggcggccaacgtgctcgacggccgcgac
gacacgtactgggcaccggccgcggcggaggcggaggacggcggcgggtactggatcgag
ctgcggcggccggcgtcggcggcggcgaggaagttcaacgtggtgaggatccaggagcac
gtggcgatggggcagcgggtggagcggcacgaggtgtacgtggacggcggcggcgcggcg
gtggcgagcggcacgacggtggggcacaagcggctgcacaggctgggcgcccccgtggcg
gggcggacggtgagggtgtggctggcgtcgcggcgaggcccgccgctgctgtcggcggtg
gggctccacctcgaccccttcgccgccggcgggggcacgatgtga
Oryza sativa japonica (Japanese rice) (RefSeq): 9269624
Help
Entry
9269624 CDS
T01015
Name
(RefSeq) alpha-L-fucosidase 2
KO
K15923
alpha-L-fucosidase 2 [EC:
3.2.1.51
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
9269624
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
9269624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hyd_65N_2
Motif
Other DBs
NCBI-GeneID:
9269624
NCBI-ProteinID:
XP_015614070
UniProt:
Q339Q0
A0A8J8XRD2
LinkDB
All DBs
Position
10:complement(9920892..9931482)
Genome browser
AA seq
851 aa
AA seq
DB search
MDGDGEWVWVRRPAEAEAVAAAAGWPTAEEEARPLEVVFASPSRYFTDAAPIGNGSLGAL
VWGGVASEKLQLNHDTLWTGGPGNYTNPKAPAVLSKVRDLVNRGQYAKATAVAYGLSGDQ
TQVYQPLGDIDLAFDEHVEDTNYKRNLDLRTATVNVSYTIGEVVHSREHFSSNPHQVIVT
KISADKPGNVSFTVSLTTPLNHQIRVTNANEIIMEGYCPGERPTEYGNASDHPVGIKFSA
ILYLQMSGSNGTVEILNDKMLKLVGADSAVLLLAAATSFEGPFVNPSESKLDPTASALTT
LTVARNMSYSQLKAYHVDDYQNLFQRVSLQLSRDSNDALGGNGLVNLPENSLQETSVSDY
AVQMVECSRFQGFNNSGKPTVDRILSFRDDEDPSLVELLFQFGRYLLISCSRPGTQISNL
QGIWNDETSPPWDAAPHPNINLQMNYWPALPCNLSECQEPLFDFIGSLSVNGAKTAKVNY
EASGWVSHQVTDLWAKTSPDAGDPMWALWPMGGPWLATHLWEHYSYTMDKQFLEKTAYPL
LEGSASFLLDWLIEGNGDYLETNPSTSPEHYFIAPDGRKACVSYSTTMDMSIIREVFSAV
LMSSDILGKSDSDMVQRIKKAIPRLPPIKVARDGTIMEWAQDFQDPEVHHRHVSHLFGLY
PGHTMSLEKTPDLCKAVANSLYKRGDEGPGWSTSWKMALWAHLHNSEHAYKMILQLITLV
DPKHEVEKEGGLYCNLFTAHPPFQIDANFGFPAALSEMLVQSTGSDLYLLPALPRDKWPQ
GCVKGLKARGGVTINIRWEEGSLHEALLWSSSSQNSRIKLHYGDQVGTISVSPCQVYRFS
KDLKCLKTWAL
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgacggcgagtgggtgtgggtgcggcggccggcggaggcggaggccgtggcg
gcggcggcggggtggccgacggcggaggaggaggcgcggccgctggaggtggtgtttgcg
tcgccgtcgaggtacttcacggacgcggcgcccatcgggaacggcagcctcggcgccctg
gtgtggggcggcgtcgcatccgagaagctacagctcaaccatgacactctatggacgggt
ggacctggtaattatacaaacccaaaagcacctgcagttctttctaaagtaagggacctt
gttaacaggggacagtatgctaaagccacggctgttgcttatggcctatctggtgaccaa
acacaggtataccagcctcttggtgatattgatctggcctttgatgaacacgtggaggac
acaaattataaaagaaacctagatcttcgaacagcaactgttaatgtctcttacaccatt
ggtgaggtggtccactcaagggaacacttctcatcaaatccacatcaagtcatcgtgact
aaaatatctgcagataaacctggaaatgtctcctttacagtgtctttgactactccattg
aaccaccagattcgtgtaacaaatgcaaacgaaataataatggaaggttattgcccagga
gaaaggcccacagaatatggcaatgcctctgatcatcccgttggaattaagttttctgct
attctctatctgcagatgagtggttccaatggcactgtggaaatattaaatgataagatg
ctgaaacttgttggtgccgactcagctgtgttgctccttgcagctgctacttcatttgaa
gggccatttgtcaatccttcggaatctaaactggatccaactgcatctgctctgacaaca
ctaactgtggcaaggaacatgtcatattcacagctaaaagcttatcacgtggatgattac
cagaatcttttccagcgagtttccttgcaactttcacgagactctaatgatgcccttgga
gggaatggtttagttaatttacctgagaatagcttacaggaaacctctgtatctgattat
gctgtacagatggtagagtgctcaagatttcaggggtttaataattcaggcaagcctacc
gtagacagaattctaagttttagagacgatgaagatccttctctggtggaactcctgttc
caatttggtcgttatctactcatttcttgctcaaggcctggaacccagatttccaatctt
caaggaatatggaatgatgaaacttcaccaccatgggatgcagctccccatccaaatata
aatctacaaatgaattattggccggcacttccttgcaaccttagcgaatgccaagaacca
ctattcgacttcattggatctctttcagttaatggagctaagacagcaaaagtaaattat
gaagctagcggttgggtcagtcatcaagtgactgacctgtgggctaaaacatcaccagat
gctggtgaccctatgtgggccttatggccaatgggtgggccatggcttgccacacacctg
tgggagcattacagttatacgatggacaaacaatttttggagaaaacagcatatcccctt
ttggaagggtctgcatcatttctgttggactggttgattgagggaaatggagattatttg
gagaccaatccttccacttctccagagcattatttcattgctccagatggtaggaaggcc
tgcgtgagctactcaacaactatggacatgtcaattataagagaagttttctcagctgtt
cttatgtcttcagatattttaggaaagtcagactcagacatggttcagagaatcaaaaaa
gcaataccaaggctcccaccaataaaagttgcaagagatggtacaatcatggagtgggca
caggattttcaggatcctgaagttcaccacagacatgtatctcacctgtttggtctttat
ccaggacatactatgtcacttgagaaaacacctgacctttgcaaagccgttgcaaatagt
ctctataaaagaggtgatgaaggtcctgggtggtccacttcctggaagatggccctttgg
gcccatcttcataacagtgagcatgcatataaaatgattcttcagctgatcactttggta
gatccaaaacatgaggttgaaaaggaaggaggcctatactgcaatctgttcacagcacac
ccacctttccaaattgatgcaaattttggattccctgctgcactgtcagaaatgctggta
cagagcaccgggagcgacttgtacttgctccctgccttaccccgtgataagtggcctcaa
ggttgtgtgaaaggtctcaaggcccgaggcggtgtgaccatcaacatcaggtgggaggaa
ggtagcctccatgaagctctgctttggtccagcagcagccagaattcacgtatcaagctg
cactatggagatcaggttgggacgatcagtgtctcgccttgtcaagtttacaggttcagc
aaggatctgaagtgcttgaagacttgggctctctga
DBGET
integrated database retrieval system
