Oryza sativa japonica (Japanese rice) (RefSeq): 107275720 Help Entry 107275720         CDS       T01015                                  Name (RefSeq) probable pectate lyase 4   KO K01728   pectate lyase [EC:4.2.2.2] Organism osa  Oryza sativa japonica (Japanese rice) (RefSeq) Pathway osa00040   Pentose and glucuronate interconversions osa01100   Metabolic pathways Brite KEGG Orthology (KO) [BR:osa00001]  09100 Metabolism   09101 Carbohydrate metabolism    00040 Pentose and glucuronate interconversions     107275720 Enzymes [BR:osa01000]  4. Lyases   4.2  Carbon-oxygen lyases    4.2.2  Acting on polysaccharides     4.2.2.2  pectate lyase      107275720 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pectate_lyase_4 Beta_helix NosD Motif Other DBs NCBI-GeneID:  107275720 NCBI-ProteinID:  XP_015649689 UniProt:  Q6Z9K9 LinkDB All DBs Position 8:11310680..11312142 Genome browser AA seq 384 aa AA seqDB search MANRNVPMLLPLAVLFLLGSGGVATAANVIDRCWRGQRNWAADRQRLAVCSVGFAGKMRQ NRGAGVVAYTVTDPSDDPVRPRPGTLRYGATVLPAKVWITFARDMRIRLAQPLYVKNFTT IDGRGADVHVAGGAGIVLYHARDVIVHGLHVHDCRAQPPGRVVVPGGAVQPSGSGDGDAI RLVASSKVWIDHNTLSRCEDGLLDVTVGSTDVTVSNNWFHDHDKVMLLGHDDGFTTDRRM RVTVAFNRFGPNVNQRMPRIRHGYAHVVNNLYDGWRDYAIGGSMGPSVKSQGNLFAASGG AGDNKKVTRRMPAVARGGGGGGKDQWHLHSVGDAFENGAFFRQVGNRVRPNYNRHQAFSA ASAGDVRALTGGVGALTCSATAAC NT seq 1155 nt NT seq  +upstreamnt  +downstreamnt atggccaaccgcaatgtaccaatgcttctgcccctcgccgtcctcttcctcctcggcagc ggcggcgtcgccaccgccgcgaacgtgatcgaccggtgctggcgcggccagcgcaactgg gccgccgaccggcagcgtctggccgtgtgctcggtgggcttcgccggcaagatgcggcag aaccgcggcgccggcgtggtcgcctacacggtcaccgacccgagcgacgaccccgtccgg ccgcggcccggcacgctccggtacggcgcgacggtgctgccggcgaaggtgtggatcacc ttcgcgcgcgacatgcgcatcaggctggcccagccgctgtacgtcaagaacttcaccacc atcgacggccgcggcgccgacgtgcacgtcgccggcggggccggcatcgtgctgtaccac gcgagggacgtgatcgtccacggcctccacgtgcacgactgccgcgcgcagccgccggga cgggtggtcgtcccgggtggcgccgtgcagccctccggcagcggcgacggcgacgccatc cgcctggtggcgagctccaaggtgtggatcgaccacaacacgctgtcccgctgcgaggac ggcctgctcgacgtcacggtcggctccaccgacgtcaccgtctccaacaactggttccac gaccacgacaaggtgatgctcctcggccacgacgacggcttcaccaccgaccgccgcatg cgcgtcaccgtcgccttcaaccgcttcggcccaaacgtcaaccagcgcatgccaaggata aggcacgggtacgcgcacgtggtgaacaacctgtacgatgggtggagggactacgccatt ggagggagcatggggccgagcgtgaagagccagggcaacctgttcgcggcgtcgggcggc gccggcgacaacaagaaggtgacgaggaggatgccggccgtggcgcgcggcggcggcggc ggcgggaaggatcagtggcacttgcactcggtcggcgacgccttcgagaacggcgcgttc ttccggcaggtgggcaacagggtgcggcccaactacaatcggcaccaggccttctcggcg gcgagcgccggcgacgtaagggcgctcaccggcggcgtcggcgctctcacgtgctctgcc acggcggcgtgctga

Oryza sativa japonica (Japanese rice) (RefSeq): 107276207 Help Entry 107276207         CDS       T01015                                  Name (RefSeq) putative pectate lyase 21   KO K01728   pectate lyase [EC:4.2.2.2] Organism osa  Oryza sativa japonica (Japanese rice) (RefSeq) Pathway osa00040   Pentose and glucuronate interconversions osa01100   Metabolic pathways Brite KEGG Orthology (KO) [BR:osa00001]  09100 Metabolism   09101 Carbohydrate metabolism    00040 Pentose and glucuronate interconversions     107276207 Enzymes [BR:osa01000]  4. Lyases   4.2  Carbon-oxygen lyases    4.2.2  Acting on polysaccharides     4.2.2.2  pectate lyase      107276207 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pectate_lyase_4 Beta_helix Ribonuclease_3 Hexapep_loop Motif Other DBs NCBI-GeneID:  107276207 NCBI-ProteinID:  XP_015639730 LinkDB All DBs Position 1:35889803..35892141 Genome browser AA seq 368 aa AA seqDB search MEPPQLDGQCGGEPPASVEGVVFMPYATADSSLRVMAGQAEGFGRHAIGGLHGDVYHVTT LEDDGDGSLREGCRRREPLWIVFDVSGTIHLSTGLRVSSYKTIDGRGQRVTLSGKGLQLR ECEHVIVCNLEVEGCRGHDADAVAVKPGSRHVWIDRCGLRGCGDGLLDVTRGSTDVTVSR CRFSAHDKAVLIGGSAGHVEDRAIRVTIHHCLFDGTRQRHPRVRFGRVHLYNNYTRGWGI YAVCASVESQIVSQCNIYEAGEKKKVFKYMIEQAADRDQSSTGFIRSEGDLFLNGAEECT AQDSEAAADELWDFKIQELDFYQSCSVQPASMALKELLECFTGWQPVPLPEDTCLEEETD SAPADTTA NT seq 1107 nt NT seq  +upstreamnt  +downstreamnt atggagcctcctcaactcgacggccagtgcgggggcgagccaccggcatccgtggaggga gtcgtgttcatgccgtacgccaccgcggactcctcgctgcgcgtcatggccggtcaggcc gagggcttcggccgccacgccatcggcggcctccacggcgacgtctaccacgtcacgacc ctcgaggacgacggggacgggtcgctccgggagggttgccggaggcgcgagccgctatgg atcgtcttcgacgtgtcgggcaccatccacctctcgacgggactgcgcgtgtcgtcgtac aagaccatcgacggccgcgggcagcgtgtgacactgtccggcaaggggctccagctgcgg gagtgcgagcatgtgatcgtctgcaacctggaggtggaagggtgccgcggccacgacgcc gacgccgtggcggtgaagcccgggtcgcggcacgtgtggatcgaccggtgcggcctccgc ggctgcggcgacggcctcctcgacgtcacccggggcagcacggacgtgaccgtgtccagg tgccgcttctcggcgcacgacaaggccgtgctgatcggcggcagcgccggccacgtcgag gaccgtgccatccgggtgaccatccaccactgcctcttcgacggcacgcggcagaggcac ccgcgcgtccgcttcggcagggtgcacctctacaacaactacaccaggggctggggcatt tacgctgtctgcgccagtgtcgagtcacagattgtatcccagtgcaacatttacgaggca ggggagaagaagaaagtcttcaagtacatgatagaacaggcggcagacagagaccagagt tcaactgggttcatccggtctgaaggcgacctgttcctgaacggtgcagaggagtgcact gctcaggattcagaagctgcggcagatgagctgtgggacttcaagattcaggaattggat ttctaccagtcttgttccgttcagccggcgtcaatggcgctcaaggagctactggagtgc ttcaccggctggcagccagttccgctgccggaagacacttgcctcgaagaggaaactgat tctgctcctgctgacactactgcttga

Oryza sativa japonica (Japanese rice) (RefSeq): 4326883 Help Entry 4326883           CDS       T01015                                  Name (RefSeq) putative pectate lyase 21   KO K01728   pectate lyase [EC:4.2.2.2] Organism osa  Oryza sativa japonica (Japanese rice) (RefSeq) Pathway osa00040   Pentose and glucuronate interconversions osa01100   Metabolic pathways Brite KEGG Orthology (KO) [BR:osa00001]  09100 Metabolism   09101 Carbohydrate metabolism    00040 Pentose and glucuronate interconversions     4326883 Enzymes [BR:osa01000]  4. Lyases   4.2  Carbon-oxygen lyases    4.2.2  Acting on polysaccharides     4.2.2.2  pectate lyase      4326883 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pectate_lyase_4 Beta_helix Motif Other DBs NCBI-GeneID:  4326883 NCBI-ProteinID:  XP_015618887 UniProt:  A0A0P0V431 Q8RYR4 LinkDB All DBs Position 1:complement(20317863..20319607) Genome browser AA seq 364 aa AA seqDB search MGASCSSPFPPPPSPAESNAPSASAMHHPPHPAAGGGGPVMPYADADRTLRALAGAAEGF GRRAIGGLHGPLYRVTSLDDDGHGTLRQACRAHGPLWIVFDVSGDIHLRTYLRVTSHKTI DGRGQRVRLLGKGLQLKECRHVIVCNLQIEGGRGHDVDAIQIKPSSADIWIDRCSLADCD DGLVDITRGSTDVTVSRCRFSRHDKTMLVGADPSHTGDRGIRVTVHHCFFDGTRQRHPRV RFGRAHLYNNYTRGWGIYAVAAGVEAQVASQCNVYEAGAERKAVFRYVPERAADREEAEA GWVRSEGDAFLNGARPCLVDGGDAAVFRPEEYYERWTMEAASPALKEVVQLCAGWQPVPR PPGE NT seq 1095 nt NT seq  +upstreamnt  +downstreamnt atgggcgcctcctgctcctcccccttcccccctcctccttcacctgccgaatccaacgcc ccctccgcctccgcgatgcaccacccgcctcaccccgcggccggaggaggaggacccgtc atgccgtacgccgacgccgaccgcaccctccgcgcgctggccggcgcggcggagggcttc ggccgccgcgccatcggcgggctccacggcccgctctaccgcgtcacctccctcgacgac gacggccacggcaccctccgccaggcgtgccgcgcccacggcccgctctggatcgtcttc gacgtctccggcgacatccacctccgcacctacctccgcgtcacctcccacaagaccatc gacgggcgcggccagcgcgtgcgcctcctgggcaaggggctccagctcaaggagtgccgc cacgtgatcgtctgcaacctccagatcgagggcgggcgcggccacgacgtggacgccatc cagatcaagccctcctccgccgacatctggatcgaccgctgcagcctcgccgactgcgac gacggcctcgtggacatcacccgcgggagcaccgacgtcaccgtctcccggtgccgcttc tcccgccacgacaagaccatgctggtgggcgccgacccgtcccacaccggcgaccgcggc atccgcgtcaccgtccaccactgcttcttcgacggcacgcggcagcgccacccgcgggtg cggttcgggagggcgcacctgtacaacaactacacgagggggtggggcatctacgcggtg gccgccggggtggaggcgcaggtggcgtcgcagtgcaacgtgtacgaggccggggcggag aggaaggcggtgttcaggtacgtgccggagagggcggcggaccgggaggaggcggaggcc gggtgggtgaggtcggagggggacgccttcctcaacggggcgcggccgtgcctggtggac ggcggcgacgcggcggtgttcaggccggaggagtactacgagaggtggaccatggaggcg gcgtcgccggcgctcaaggaggtggtgcagctgtgcgccgggtggcagcccgtgccgagg ccaccgggcgagtga

Oryza sativa japonica (Japanese rice) (RefSeq): 4328714 Help Entry 4328714           CDS       T01015                                  Name (RefSeq) pectate lyase   KO K01728   pectate lyase [EC:4.2.2.2] Organism osa  Oryza sativa japonica (Japanese rice) (RefSeq) Pathway osa00040   Pentose and glucuronate interconversions osa01100   Metabolic pathways Brite KEGG Orthology (KO) [BR:osa00001]  09100 Metabolism   09101 Carbohydrate metabolism    00040 Pentose and glucuronate interconversions     4328714 Enzymes [BR:osa01000]  4. Lyases   4.2  Carbon-oxygen lyases    4.2.2  Acting on polysaccharides     4.2.2.2  pectate lyase      4328714 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pectate_lyase_4 Pec_lyase_N Beta_helix Motif Other DBs NCBI-GeneID:  4328714 NCBI-ProteinID:  XP_015625737 UniProt:  Q6H8B0 A0A0P0VGE6 LinkDB All DBs Position 2:complement(6399410..6402206) Genome browser AA seq 446 aa AA seqDB search MDDQRLQWRKPGSFLLVAGVFLAAAAAVSNAGIGEFDEHWEKRRAAAEAAAEEVYKPDPF NVTNEFNHAVIRSTERGVLRRELSGKNSKYKGPCLATNPIDRCWRCRKDWATDRKRLARC AMGFGRGATGGVRGKIYVVTDPGDGDAANPRYGTLRWGAMQAAPLWITFAKSMVIRLTQE LLVASDKTIDGRGAQVHIARGGAGITVQFARNVIITSLHVHDVKHSDGGAVRDSPTHIGP RTRADGDGISLFAATDVWVDHVSMSMCEDGLIDVVQGSTGVTISNSHFTNHNDVMLFGAS DSYPQDKVMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGGMSPTILSQ GNRYIAPPNIAAKLITRHYAPEWEWKNWAWRSDGDLFMNGAYFQASNGAINRKVKGSDMV KPKPGSYVRRLTRFAGALSCRPGEPC NT seq 1341 nt NT seq  +upstreamnt  +downstreamnt atggatgaccagaggctccagtggaggaagcccggctccttcctcctcgtcgccggcgtg ttcctggcggcggcggccgctgtgtcgaacgccggcataggcgagttcgacgagcattgg gagaagcgcagggcggcggcggaggcggcggcggaggaggtgtacaaaccggaccccttc aatgtcaccaacgagttcaaccacgctgtcatcagatcgacggagcgcggcgttctccgg cgagagttgagtgggaagaacagcaagtacaaggggccgtgcctggcgacgaacccgatc gaccggtgctggcgctgccgcaaggactgggccaccgaccggaagcggctcgcccggtgc gccatgggcttcggccgcggcgccaccggcggcgtccgcggcaagatctacgtcgtcacc gaccccggcgacggcgacgccgccaacccgcgctacggcacgctccggtggggcgccatg caggcggcgccgctgtggatcaccttcgccaagtccatggtgatccgcctcacgcaggag ctcctcgtcgccagcgacaagaccatcgacggccgcggcgcgcaggtgcacatcgcgcgc ggcggcgccgggatcaccgtccagttcgcccgcaacgtgatcatcaccagcctccacgtc cacgacgtgaagcacagcgacggcggcgcggtccgcgactcgccgacgcacatcggcccc cgcacgcgggccgacggcgacggcatctcgctcttcgccgccaccgacgtgtgggtggac cacgtctccatgtccatgtgcgaggacgggctcatcgacgtcgtgcagggctcgacgggg gtgaccatctccaacagccacttcaccaaccacaacgacgtcatgctgttcggcgccagc gactcgtacccgcaggataaggtgatgcagatcaccgtggcgttcaaccacttcggccgt gggctcgtgcagcggatgccgcgatgccggtgggggttcttccacgtcgtcaacaacgac tacacgcactggctcatgtacgccatcggcggcggcatgagccctaccatcctcagccag ggcaaccgatacatcgcccctcccaacatcgccgccaaactgatcacgaggcactatgcg ccggagtgggagtggaagaactgggcgtggcgctcggacggagacctgttcatgaacggc gcctacttccaggcgtccaacggcgccatcaacaggaaggtgaagggctccgacatggtt aagcccaagccaggctcctacgtcaggaggctcacacgcttcgccggcgcgctctcctgc cggcccggcgagccgtgctga

Oryza sativa japonica (Japanese rice) (RefSeq): 4335013 Help Entry 4335013           CDS       T01015                                  Name (RefSeq) probable pectate lyase 8   KO K01728   pectate lyase [EC:4.2.2.2] Organism osa  Oryza sativa japonica (Japanese rice) (RefSeq) Pathway osa00040   Pentose and glucuronate interconversions osa01100   Metabolic pathways Brite KEGG Orthology (KO) [BR:osa00001]  09100 Metabolism   09101 Carbohydrate metabolism    00040 Pentose and glucuronate interconversions     4335013 Enzymes [BR:osa01000]  4. Lyases   4.2  Carbon-oxygen lyases    4.2.2  Acting on polysaccharides     4.2.2.2  pectate lyase      4335013 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pectate_lyase_4 Beta_helix NosD Motif Other DBs NCBI-GeneID:  4335013 NCBI-ProteinID:  XP_015634113 LinkDB All DBs Position 4:2480437..2485897 Genome browser AA seq 473 aa AA seqDB search MAEAAARRWAAALVLLVLLTGTVELIGGGGGSGGRRLLAGLRAGSTAAASGTRRWLRDSS WPATAAAAAAASRGDDGDGDEASSAAMTVPGAVDDPEEVVSQVHMSIRNSTARRKLGYLS CGTGNPIDDCWRCDPDWHKNRQRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDAVNPKKG TLRYAVIRDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGANVHIANGACITIQYVTNVI IHGLHIHDCRPTGNAMVRSSPSHYGWRTMADGDAVSIFGASHIWVDHCSLSNCADGLIDA IMGSTAITVSNNYFTHHNEVMLLGHSDSYVKDKAMQVTIAFNHFGEGLIQRMPRCRHGYF HVVNNDYTHWEMYAIGGSAEPTINSQGNRYLAPTNPFAKEVTKRVETAQTIWKGWNWRSE GDLLLNGAFFTPSGAGASASYSRASSLGAKSSSMVGTITSGAGALSCRGGSAC NT seq 1422 nt NT seq  +upstreamnt  +downstreamnt atggcggaggcggcggcgaggaggtgggcggcggcgctggtgctgctggtgcttctcacc ggcaccgtcgagctcatcggcggcggaggcgggagcggcgggcggcggcttctcgctggc ctccgggccgggagcacggcggcggcgagcggcacgcggcggtggctgcgcgactcgtcc tggccggcgacggcggcggccgcggcggcggcgagcagaggagatgacggtgatggcgat gaggcgtcgtcggcggcgatgacggtgcccggcgcggtggacgacccggaggaggtggtc tcgcaagtgcacatgtcgatcaggaacagcacggcgaggaggaagctgggctacctgtcg tgcggcaccggcaatccgatcgacgactgctggaggtgcgacccggactggcacaagaat cgccagcggctcgccgactgcggcatcggcttcggccgcaacgccatcggcggccgcgac ggcaagatctacgtggtcaccgaccccagcgacgacgacgcggtgaaccccaagaagggc acgctccggtacgccgtcatccgcgacgagccgctgtggatcgtcttcaagcgcgacatg gtgatcacgctcaagcaggagctgatcatgaacagcttcaagaccatcgacggccgtggc gccaacgtgcacatcgccaatggcgcctgcatcaccatccagtacgtcaccaacgtcatc atccatggcctgcacatccatgactgcaggcccaccggcaatgccatggtccggagctcg cccagccactacgggtggcgcaccatggccgacggcgacgccgtctccatcttcggcgcc agccacatctgggttgaccattgctcgctctccaactgcgccgacggcctcatcgacgcc atcatgggttccactgcaatcacagtgtccaacaactacttcacccaccacaatgaggtg atgctcctgggtcacagcgattcctatgtcaaggacaaggcaatgcaggtcacgatagca ttcaaccatttcggagaaggtcttattcagagaatgccaaggtgcaggcatggttacttc catgtggtgaacaatgactacacccactgggagatgtacgcaattggtggaagtgctgag ccaaccatcaacagccagggcaaccgctaccttgctccgacaaatccctttgccaaggag gttacaaagagggttgagactgctcagaccatctggaagggctggaactggagatcagag ggggatctcctcctgaacggcgccttcttcaccccatcaggtgcaggcgcctcggccagc tactcgcgcgcctcaagcctcggtgccaagtcatcatccatggttggcaccatcacatcc ggtgcgggcgccttgtcgtgccgcgggggctcagcctgctag

Oryza sativa japonica (Japanese rice) (RefSeq): 4338309 Help Entry 4338309           CDS       T01015                                  Name (RefSeq) pectate lyase   KO K01728   pectate lyase [EC:4.2.2.2] Organism osa  Oryza sativa japonica (Japanese rice) (RefSeq) Pathway osa00040   Pentose and glucuronate interconversions osa01100   Metabolic pathways Brite KEGG Orthology (KO) [BR:osa00001]  09100 Metabolism   09101 Carbohydrate metabolism    00040 Pentose and glucuronate interconversions     4338309 Enzymes [BR:osa01000]  4. Lyases   4.2  Carbon-oxygen lyases    4.2.2  Acting on polysaccharides     4.2.2.2  pectate lyase      4338309 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pectate_lyase_4 Beta_helix Gyro_capsid Motif Other DBs NCBI-GeneID:  4338309 NCBI-ProteinID:  XP_015638870 UniProt:  B9FK32 Q0DJF3 LinkDB All DBs Position 5:complement(12933093..12938362) Genome browser AA seq 373 aa AA seqDB search MAAIFIFIWLFASVLSISSASSPLLINGSTADAAPDCGTGNPIDDCWRCDPGWADNRQRL ADCAVGFGRRAVGGKGGRVYVVNDTGDDAARPAPGTLRYGLVQDEPLWIVFAGDMTISPA HELVVSSRKTVDGRGARVVVGDGGACFAVRGASDVVIHGLTIRRCRPAPKLEAGMSDGDG VHNSSDVWVDHCTVEACADGLIDVVVGSTRVTLSNNLLRNHDKAILLGHNDDYTDDKAMQ VTVAFNRFGPGLVQRMPRCRFGLFHVINNDYIAWQKYAIGGSASPTIISHGNRFYADMAK EVTKRDDDVPESVWHHWNWVSDGDLMLNGAFFRASGEARTDNLKAPSFARSAPSVPSMTS SAGALSCKEGSHC NT seq 1122 nt NT seq  +upstreamnt  +downstreamnt atggctgccatcttcatattcatatggttgttcgcctccgttttatccatttcatcagct tcttctcctttgctgatcaatggtagtactgctgatgctgcaccggactgcggtaccggc aacccgatcgacgactgctggcgttgcgaccccggctgggccgacaaccggcagcggctc gccgactgcgccgtcgggttcggccgccgcgccgtcggcgggaaggggggcagggtgtat gtcgtgaacgacaccggcgacgacgcagcccgcccggcacccggcacgctccggtacggc ctcgtccaggacgagcccctctggatcgtgttcgccggcgacatgaccatcagccccgcc cacgagctggtcgttagctcgcgcaagaccgtggacggcaggggcgcccgcgtggtggtt ggcgacggcggcgcgtgcttcgcggtgaggggcgcgagcgacgtcgtcatccacgggctt accatacgccggtgcaggccggcacccaagctggaggccggcatgtcggacggcgacggc gtccacaactcgagcgacgtgtgggtcgaccactgcacggtggaggcctgcgccgacggg ctgatcgacgtggtcgtaggttccacccgcgtgacgctttccaacaacctcctgcgcaac catgacaaggcaattctcctcggccacaacgacgactacaccgacgacaaggccatgcag gtcaccgttgccttcaatcgctttggaccaggcctcgtccaaagaatgccaaggtgtcgg tttggtcttttccacgtcatcaacaacgattacatagcatggcaaaagtacgccattggg ggcagtgcttcaccgaccataattagccacggcaacagattctatgctgatatggccaaa gaggtgacgaagcgcgatgacgatgtgccggagagcgtgtggcaccactggaactgggta tccgacggcgacctgatgctcaacggcgcgttcttcagggcatcaggcgaagcaaggaca gataatttgaaagcccctagctttgcaaggtctgccccctccgtgccgtcgatgacttcc tcggcaggcgccctctcctgcaaggagggctcgcactgctga

Oryza sativa japonica (Japanese rice) (RefSeq): 4340099 Help Entry 4340099           CDS       T01015                                  Name (RefSeq) pectate lyase   KO K01728   pectate lyase [EC:4.2.2.2] Organism osa  Oryza sativa japonica (Japanese rice) (RefSeq) Pathway osa00040   Pentose and glucuronate interconversions osa01100   Metabolic pathways Brite KEGG Orthology (KO) [BR:osa00001]  09100 Metabolism   09101 Carbohydrate metabolism    00040 Pentose and glucuronate interconversions     4340099 Enzymes [BR:osa01000]  4. Lyases   4.2  Carbon-oxygen lyases    4.2.2  Acting on polysaccharides     4.2.2.2  pectate lyase      4340099 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pectate_lyase_4 Pec_lyase_N Beta_helix DUF2505 Motif Other DBs NCBI-GeneID:  4340099 NCBI-ProteinID:  XP_015642576 UniProt:  Q0DEM8 A0A0P0WSR5 LinkDB All DBs Position 6:complement(2336431..2338207) Genome browser AA seq 450 aa AA seqDB search MDIYTTSHHSTIMAASSVTGSRRLCILFYLLTVVATVVTAASAHTAHNATADEEYWEKRA EEARSFNRAAYVSDPVATLNRFNADVLRATTRRSLARYTGPCMATNPIDRCWRCRDDWAT DRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKGTLRYGVIQDRPMWIVFARD MIIQLRQELIVNHNKTIDGRGAQVHITGAQITLQGVQHVIIHNVHIHHSVPHGGGMIRDS KRHYGLRTRSDGDGISIMSSSNIWIDHVSMSNCSDGLIDAVSGSTAITISNGHFTKHDHV MLFGASNSDAQDEVMQITVAFNHFGKGLVPRCRFGFFHVVNNDYTHWLMYAIGGNMNPTI ISQGNRFIAPDDLNAKEVTKREYTPYDEYKEWVWKSQGDVMMNGAFFNESGGQNERSYDQ LDFIPAKHGKYVGQLTKFAGTLNCHVGMPC NT seq 1353 nt NT seq  +upstreamnt  +downstreamnt atggatatatatacgacatcacatcacagcacaataatggcagcctcctccgtcacgggg agccgccgcctctgcattctcttctacctcctcactgtcgtcgccaccgtggtcaccgcg gcgtcggcgcacacggcgcacaacgccaccgccgacgaggagtactgggagaagcgcgcc gaggaggcccgctcgttcaaccgcgccgcctacgtgagcgaccccgtcgccaccctgaac cgcttcaacgccgacgtgctccgcgccaccacgcgccgctcgctggccaggtacaccggc ccgtgcatggcgaccaaccccatcgaccgctgctggcgctgccgcgacgactgggccacc gaccggaagcggctggcgcggtgcgtccgtgggttcggccacaggaccgtcggcggcgcc gctggcaagatctacgtggtgaccgacgccagcgacgacgagatggtcatcccgaggaaa gggacgctccggtacggcgtgatccaggaccggccgatgtggatcgtgttcgcgcgcgac atgatcatccagctccggcaggagctgatcgtgaaccacaacaagaccatcgacggccgt ggcgcgcaggtgcacatcaccggcgcccagatcacgctccagggcgtccagcatgtgatc atccacaacgtccacatccaccactcggtgccgcacggcggcggcatgatccgcgactcc aagcgccactacggcctccgcacgcgcagcgacggcgacggcatctccatcatgtcctcc tccaacatctggatcgaccacgtctccatgtccaactgctccgacggcctcatcgacgcc gtcagcggctccaccgccatcaccatctccaacggccacttcaccaagcacgaccacgtc atgctcttcggcgccagcaacagcgacgcccaggacgaggtgatgcagatcaccgtggcg ttcaaccacttcggcaagggccttgtgccgcgctgcaggttcggattcttccacgtcgtc aacaacgactacacgcactggctcatgtacgccatcggtggcaacatgaacccgacgatc atcagccaggggaacaggttcatcgcgcccgacgacttgaacgccaaggaggtgaccaag agggagtacacgccgtacgacgagtacaaggagtgggtgtggaagtcgcagggcgacgtg atgatgaacggcgccttctttaacgagtccggcggccagaacgagcgcagctacgaccag ctcgacttcatccctgccaagcacggcaagtacgtcggccagctcaccaagttcgccggc acgctcaactgccacgtcggcatgccatgctaa

Oryza sativa japonica (Japanese rice) (RefSeq): 4340103 Help Entry 4340103           CDS       T01015                                  Name (RefSeq) pectate lyase   KO K01728   pectate lyase [EC:4.2.2.2] Organism osa  Oryza sativa japonica (Japanese rice) (RefSeq) Pathway osa00040   Pentose and glucuronate interconversions osa01100   Metabolic pathways Brite KEGG Orthology (KO) [BR:osa00001]  09100 Metabolism   09101 Carbohydrate metabolism    00040 Pentose and glucuronate interconversions     4340103 Enzymes [BR:osa01000]  4. Lyases   4.2  Carbon-oxygen lyases    4.2.2  Acting on polysaccharides     4.2.2.2  pectate lyase      4340103 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pectate_lyase_4 Pec_lyase_N Beta_helix Motif Other DBs NCBI-GeneID:  4340103 NCBI-ProteinID:  XP_015644282 UniProt:  B7EHZ9 LinkDB All DBs Position 6:2372992..2374785 Genome browser AA seq 448 aa AA seqDB search MAGSVVTRSPLCSILFYVLATAAAATATATLVGNITADEEYWAKRSEVARSFNRAAYVSD PVAVLNRFNEDVLNTTTATAAAARRSLMRRYRRRGPCTVTNPIDLCWRCRKNWASRRKRL AKCAMGFGHKATGGLAGKIYIVTDAGDEHLVIPRRGTLRHAVIQERPLWIVFARSMVIRL AKELIVTSDKTIDGRGAQVHVTGAQITVQAVSNVIIHNLHIHNSVPRSGGLIRDSMHHFG IRGESDGDGISVMGSSNIWIDHVSMSNCSDGLIDITDGSTAITISNSHFTKHDHVMLFGA RDDSPKDKIMQVTLAFNHFGKGLVQRMPRCRFGFFHMVNNDYTHWLMYAIGGNMNPTIIS QGNRFRASDDMKLKEVTKREYTSYDEYKEWVWKSQDDLFLNGAFFNESGGRNERRYNRLD LIQARNGRYVGRMTRFAGTLPCRVGKKC NT seq 1347 nt NT seq  +upstreamnt  +downstreamnt atggcgggctccgtcgtgacgaggagcccactgtgctccatcctcttctacgtcctcgcc acggccgccgcggcgacggcgacggcgacgcttgtgggcaacatcaccgccgacgaggag tactgggccaagcgctccgaggtggcgcgctcgttcaaccgcgccgcctacgtcagcgac cccgtcgccgtgctgaacaggttcaacgaggacgtgctgaataccacgacggcgacggcg gcggcggcgcggcggtcgctgatgaggaggtaccggcgtcgtggcccgtgcacggtgacg aacccgatcgacctgtgctggcgctgccgcaagaactgggcgagccgtcgcaagcggctg gccaagtgcgccatggggttcggccacaaggccaccggcgggctcgccggcaagatctac atcgtgacggacgccggcgacgagcacctcgtcatccctcggcggggcacgctccggcac gccgtgatccaggagcggccgctgtggatcgtcttcgcgcggagcatggtgatcaggctc gccaaggagctcatcgtcaccagcgacaagaccatcgacggccgcggcgcgcaggtgcac gtcaccggcgcgcagatcacggtgcaggcggtgagcaacgtcatcatccacaacctccac atccacaactccgtgccgcgctccggcggcctcatccgcgactccatgcaccacttcggc atccgcggcgagagcgacggcgacggcatctccgtcatgggctccagcaacatctggatc gaccacgtctccatgtccaactgctccgacggcctcatcgacatcaccgacggctccacc gccatcaccatctccaactcccacttcaccaagcacgatcacgtgatgctgttcggtgca cgcgacgactcgccgaaggacaagatcatgcaggtaacgctggcattcaaccactttggc aaggggctcgtgcagaggatgccgaggtgcaggtttggattcttccacatggtgaacaac gactacacgcactggctcatgtacgccatcggcggcaacatgaacccgacgatcatcagc caggggaacaggttcagggcaagcgacgacatgaagctcaaggaggtgaccaagagggag tacacgagctacgacgagtacaaggagtgggtgtggaagtcgcaggacgacctcttcctc aacggcgccttcttcaacgagtccggcggccggaacgagcgccggtacaaccggctcgac ctcatccaggccaggaacggccgctacgtcggccggatgaccaggttcgccggcacgctg ccatgccgtgtcggcaagaaatgctag

Oryza sativa japonica (Japanese rice) (RefSeq): 4340105 Help Entry 4340105           CDS       T01015                                  Name (RefSeq) pectate lyase   KO K01728   pectate lyase [EC:4.2.2.2] Organism osa  Oryza sativa japonica (Japanese rice) (RefSeq) Pathway osa00040   Pentose and glucuronate interconversions osa01100   Metabolic pathways Brite KEGG Orthology (KO) [BR:osa00001]  09100 Metabolism   09101 Carbohydrate metabolism    00040 Pentose and glucuronate interconversions     4340105 Enzymes [BR:osa01000]  4. Lyases   4.2  Carbon-oxygen lyases    4.2.2  Acting on polysaccharides     4.2.2.2  pectate lyase      4340105 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pectate_lyase_4 Pec_lyase_N Beta_helix DUF2505 Motif Other DBs NCBI-GeneID:  4340105 NCBI-ProteinID:  XP_015642201 LinkDB All DBs Position 6:2377652..2379279 Genome browser AA seq 470 aa AA seqDB search MTPVPRRKRPSCTRRIWNSSRDCNARAKERPPPSRGPAASAFSSTSSPSSPWSPRLRRGG VLGEEAHNATADEEYWEKRAEEARSFNRAAYVSDPVATLNRFNADVLRATTRRSLARYTG PCMATNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRK GTLRYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHITGAQITLQGVQHVI IHNVHIHHSVPHGGGMIRDSKRHYGLRTRSDGDGISIMSSSNIWIDHVSMSNCSDGLIDA VSGSTAITISNGHFTKHDHVMLFGASNSDAQDEVMQITVAFNHFGKGLVPRCRFGFFHVV NNDYTHWLMYAIGGNMNPTIISQGNRFIAPDDLNAKEVTKREYTPYDEYKEWVWKSQGDV MMNGAFFNESGGQNERSYDQLDFIPAKHGKYVGQLTKFAGTLNCHVGMPC NT seq 1413 nt NT seq  +upstreamnt  +downstreamnt atgacccctgtgccaagaagaaaaagacctagctgtaccagaaggatctggaacagctcg agagactgcaatgcaagagcgaaagagaggccgcctccgtcacggggacccgccgcctct gcattctcttctacctcctcaccgtcgtcgccgtggtcaccgcggcttcggcgaggaggc gtactgggagaggaggcgcacaacgccaccgccgacgaggagtactgggagaagcgcgcc gaggaggcccgctcgttcaaccgcgccgcctacgtgagcgaccccgtcgccaccctgaac cgcttcaacgccgacgtgctccgcgccaccacgcgccgctcgctggccaggtacaccggc ccgtgcatggcgaccaaccccatcgaccgctgctggcgctgccgcgacgactgggccacc gaccggaagcggctggcgcggtgcgtccgtgggttcggccacaggaccgtcggcggcgcc gctggcaagatctacgtggtgaccgacgccagcgacgacgagatggtcatcccgaggaaa gggacgctccggtacggcgtgatccaggaccggccgatgtggatcgtgttcgcgcgcgac atgatcatccagctccggcaggagctgatcgtgaaccacaacaagaccatcgacggccgt ggcgcgcaggtgcacatcaccggcgcccagatcacgctccagggcgtccagcatgtgatc atccacaacgtccacatccaccactcggtgccgcacggcggcggcatgatccgcgactcc aagcgccactacggcctccgcacgcgcagcgacggcgacggcatctccatcatgtcctcc tccaacatctggatcgaccacgtctccatgtccaactgctccgacggcctcatcgacgcc gtcagcggctccaccgccatcaccatctccaacggccacttcaccaagcacgaccacgtc atgctcttcggcgccagcaacagcgacgcccaggacgaggtgatgcagatcaccgtggcg ttcaaccacttcggcaagggccttgtgccgcgctgcaggttcggattcttccacgtcgtc aacaacgactacacgcactggctcatgtacgccatcggtggcaacatgaacccgacgatc atcagccaggggaacaggttcatcgcgcccgacgacttgaacgccaaggaggtgaccaag agggagtacacgccgtacgacgagtacaaggagtgggtgtggaagtcgcagggcgacgtg atgatgaacggcgccttctttaacgagtccggcggccagaacgagcgcagctacgaccag ctcgacttcatccctgccaagcacggcaagtacgtcggccagctcaccaagttcgccggc acgctcaactgccacgtcggcatgccatgctaa

Oryza sativa japonica (Japanese rice) (RefSeq): 4341389 Help Entry 4341389           CDS       T01015                                  Name (RefSeq) pectate lyase   KO K01728   pectate lyase [EC:4.2.2.2] Organism osa  Oryza sativa japonica (Japanese rice) (RefSeq) Pathway osa00040   Pentose and glucuronate interconversions osa01100   Metabolic pathways Brite KEGG Orthology (KO) [BR:osa00001]  09100 Metabolism   09101 Carbohydrate metabolism    00040 Pentose and glucuronate interconversions     4341389 Enzymes [BR:osa01000]  4. Lyases   4.2  Carbon-oxygen lyases    4.2.2  Acting on polysaccharides     4.2.2.2  pectate lyase      4341389 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pectate_lyase_4 Pec_lyase_N Beta_helix Cu-oxidase_2 Motif Other DBs NCBI-GeneID:  4341389 NCBI-ProteinID:  XP_015641991 UniProt:  Q5VP91 A0A0P0WY87 LinkDB All DBs Position 6:22821032..22823348 Genome browser AA seq 448 aa AA seqDB search MEVLIRWSKLPAAGSLVLYAVFLLLSAAATSEANIGEYDEYWQKRKLMADAAAEATYKRD PFEVTNSFNRAVHRSEEESGRRELAMTKRKKFAGPCKATNPIDRCWRCRADWVTDRKRLA RCAQGFGRNTTGGLAGKFYLVTDGTDDDVENPRPGTLRWGVIQDEPLWIIFAKDMIINLK EEMMINSDKTIDGRGAQVRITNGAQVTVQNSNNVIIHNIHIHDILQGKGGMIRDSPEHFG FRTQSDGDGISIFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTNHNDVMLFGS SDSFSEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKNPTIIS QGNRYIAPPNLAAKRITKQLGATEEEWKNWVWHSEEDLFMEGAYFTTSGGPIQKQFSNKD LIKPKPGSYVTRLTRFAGSIPCVAGKPC NT seq 1347 nt NT seq  +upstreamnt  +downstreamnt atggaggtgctgatccggtggagcaagctgccggcggccggctccttggtgctgtacgcc gtcttcttattgctgtcggcggcagccacatcggaggccaacatcggggagtacgatgag tactggcagaagcgcaagctcatggctgatgccgccgccgaggctacctacaagcgtgac cccttcgaggtcaccaacagcttcaaccgcgccgtccacagatcggaggaggagagcggg aggagggagctggcgatgacgaagaggaagaagttcgcggggccgtgcaaggcgacgaac ccgatcgaccggtgctggaggtgccgcgccgactgggtgacggacaggaagcggctggcg cggtgcgcgcaggggttcggccggaacaccaccggagggctggccgggaagttctacctg gtgacggacggcaccgacgacgacgtggagaacccgcgcccggggacgctccggtggggt gtcatccaggacgagccactgtggatcatcttcgccaaggacatgatcatcaacctcaag gaggagatgatgatcaacagcgacaagacgatcgacgggcggggagcgcaggtgcggatc accaatggcgcgcaggtgacggtgcagaactccaacaacgtgatcatccacaacatccac atccacgacatcttgcaaggcaagggcgggatgatccgcgactcgccggagcacttcggc ttccgcacccagtccgacggcgacggcatcagcatcttcggctccaccaacgtctggctc gaccacctctccctctccaactgccaggacggcctcatcgacgtcatcgccaagtccacc ggagtcaccatctccaactgccacctcaccaaccacaacgacgtcatgctcttcggctcc agcgactccttcagcgaggaccagatcatgcagatcaccgtcgctttcaaccacttcggc cgcggcctcgtccaaagaatgcccagatgccgatggggatttttccacgtggtgaacaac gactacacgcactggctcatgtatgccatcggagggagcaagaacccgacgatcatcagc caggggaacaggtacatcgcgccgccaaacctagcggcgaagcggatcacgaagcagctc ggggcgacggaggaggagtggaagaactgggtgtggcactctgaggaggacctgttcatg gagggggcctacttcaccacgtccggtggcccgatccagaagcagttcagcaacaaggat ctgatcaagcccaagcccggatcctacgtcacgaggctcacccgcttcgctggctccatc ccatgcgtggccggcaagccgtgctag

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