KEGG   Oryza sativa japonica (Japanese rice): 107275752
Entry
107275752         CDS       T01015                                 
Name
(RefSeq) serine/arginine-rich SC35-like splicing factor SCL30
  KO
K12900  serine/arginine-rich splicing factor 10
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107275752
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:osa01009]
    107275752
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:osa03041]
    107275752
Protein phosphatases and associated proteins [BR:osa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     107275752
Spliceosome [BR:osa03041]
 Common components
  Common spliceosomal components
   SR proteins
    107275752
SSDB
Motif
Pfam: RRM_1 RRM_5
Other DBs
NCBI-GeneID: 107275752
NCBI-ProteinID: XP_015620444
UniProt: B9GDW0 Q2QNB0
LinkDB
Position
12:complement(join(24280168..24280291,24280583..24280765,24280840..24280894,24281108..24281148,24281253..24281417,24282315..24282392,24282531..24282676))
AA seq 263 aa
MRRYSPPYRSPPRRGYGGRGRSPPRRGYGGRREQGSGSLLVRNIPLSCRGEDLRVPFERF
GPVRDVYLPKDYYSGEPRGFAFVEFVDPYDASEAQYHMNRQVFFGREITVVLAAESRKRP
EEMRSRARVRGYSGNEGRRSSYYGRSRSRSRSPHYRGRPRSRSYSPAPRRRDDYSASPPR
KDTHPTKSPRRQPKEHDEEKKRRSYSPASRDGDPRDADNGYEKRSPPPDSDGSPPHRRSP
RHSSGSPPGSRSRSADVSPARSD
NT seq 792 nt   +upstreamnt  +downstreamnt
atgaggaggtacagcccaccatatcgcagtccccctaggaggggctatggtggcagagga
agaagtccccctaggaggggatatggaggacggagggagcagggttctggaagtctcttg
gtccgcaacatcccattaagctgcagaggggaggatcttcgagttccttttgaaaggttt
ggtcctgttcgggatgtttacctgccaaaggattattacagcggggaaccacggggattt
gcatttgtggagttcgttgacccttatgatgcctctgaggctcaatatcacatgaatcgc
caggtgtttttcggccgggagataactgttgttcttgctgctgagtcgcggaaaaggcca
gaggaaatgcgcagtagagctagagtcaggggttactctggaaacgaagggcgccgctct
tcatattatgggaggtctcgttcccgttctcgctctccccactatcgaggtcgtccacgg
tcaaggtcatactctcctgctccaagacggcgagatgactactcagcttccccaccgaga
aaggatacgcaccccacaaaatctcctaggcgtcagccaaaagaacatgatgaagagaag
aagcggagatcctactctcctgccagtagagatggcgaccctcgcgatgctgataacggt
tatgagaagaggtcgcccccacctgacagcgatggatcccctccacaccggaggtctcct
aggcactcctcagggtcgcctccaggatcccgctctaggtccgccgatgtttcccctgcc
cgcagcgactga

KEGG   Oryza sativa japonica (Japanese rice): 4324080
Entry
4324080           CDS       T01015                                 
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32
  KO
K12896  serine/arginine-rich splicing factor 7
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4324080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:osa03041]
    4324080
Spliceosome [BR:osa03041]
 Common components
  Common spliceosomal components
   SR proteins
    4324080
SSDB
Motif
Pfam: RRM_1 zf-CCHC zf-CCHC_5 RRM_5 zf-CCHC_3 RRM_3 RRM_occluded CLIP1_ZNF
Other DBs
NCBI-GeneID: 4324080
NCBI-ProteinID: XP_015618527
UniProt: Q5ZCD9 A0A0P0UY79
LinkDB
Position
1:complement(join(2994653..2995076,2995391..2995480,2995562..2995758,2995888..2995983,2996093..2996132,2996850..2996977))
AA seq 324 aa
MPRYDDRDRYDDRYGGNTRLYVGRLSSRTRTRDLEDLFGRYGRVRYVDMKHEFAFVEFSD
ARDADEARYNLDGRDFDGSRMIVEFAKGVPRGPGGSREYMGRGPPPGSGRCFNCGIDGHW
ARDCKAGDWKNRCYRCGDRGHIERDCRNSPKNLKRGRSYSRSPSPRRGRSRGRSYSRSRS
RSYSRSQSPRRDSRNERRSRSPRDSRSPRGSPRDSRSPRGSPRDSRSPKGSPRDTQSPRG
SPRDSRSPRRSASPPNGRNRSPTPNASRSPAPRDSRSPMRADSRSPADHERRDMSTAANG
RSPSPRDYEDNGNHRASPRGSASP
NT seq 975 nt   +upstreamnt  +downstreamnt
atgcctcgctatgatgaccgtgatcgctacgatgaccgttacggcggcaacacgaggctg
tacgtaggtcgtctttcctcgcgcacccggacccgggaccttgaagaccttttcggcaga
tatgggagagtgcgatatgtggatatgaagcacgagtttgcatttgttgaatttagtgat
gctcgggatgctgatgaggcaaggtacaacctggatggtcgggactttgatggaagccgc
atgattgttgagtttgctaaaggggttccacgtggccctggaggatcacgtgaatatatg
ggcagaggaccaccacctggttctggccgctgctttaactgtgggattgatgggcactgg
gcccgtgactgcaaagctggagactggaaaaacagatgctatcggtgtggagacaggggc
catatagaaagggactgccggaacagccctaagaatctcaagcgtggaagaagctactca
agatccccatcccctcgtcgtgggaggagccgtggtaggagctacagcaggagccgtagc
aggagctacagccgctcccagtctccaaggagggatagccgtaatgaaaggagatcaagg
agccctcgtgacagtcggagccctaggggaagcccccgtgacagtcgcagccctaggggg
agcccccgtgacagtcgcagccctaaggggagccctcgcgacacccagagccctagggga
agccctcgtgatagccgcagccctaggagaagtgcttcaccacccaacgggaggaaccgc
agccctacccctaatgccagcaggagtcctgcaccaagggacagcaggagcccaatgaga
gctgacagccgtagccctgctgaccatgagcgccgtgacatgagtacagctgccaatggc
cggagcccaagccccagggattatgaagacaatggcaatcatcgggcctcgcctagagga
agcgcatccccttga

KEGG   Oryza sativa japonica (Japanese rice): 4328133
Entry
4328133           CDS       T01015                                 
Name
(RefSeq) serine/arginine-rich splicing factor RS41 isoform X2
  KO
K12893  serine/arginine-rich splicing factor 4/5/6
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4328133
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:osa03041]
    4328133
Spliceosome [BR:osa03041]
 Common components
  Common spliceosomal components
   SR proteins
    4328133
SSDB
Motif
Pfam: RRM_1 RRM_5 Nup35_RRM_2 RNA_bind Nup35_RRM RRM_occluded DUF2129
Other DBs
NCBI-GeneID: 4328133
NCBI-ProteinID: XP_015626895
UniProt: Q6Z725 A0A0P0VE31
LinkDB
Position
2:complement(join(1200579..1200609,1200705..1201058,1201190..1201425,1201512..1201624,1202846..1202951))
AA seq 279 aa
MRPVFCGNLDYDARQSEIERLFSKYGRVERVDMKSGFAFVYMEDERDADEAIHRLDRIEF
GRKGRRLRVEWTKEDRSGGRRGNSKRSPNNTRPTKTLFVINFDPINTRTRDLERHFDQYG
KISNVRIRRNFAFVQYELQEDATKALEGTNGSTLMDRVISVEYALRDDDEKRNGYSPERR
GRDRSPDRRDYRGRSASPYGRGRERGSPDYGRGRERGSPDYGRGGDRGSPDYHRGASPQG
GNKGDERGSPPNNYDRERREASPGYDRPRSRSPARYERE
NT seq 840 nt   +upstreamnt  +downstreamnt
atgaggccagttttctgtggaaaccttgactatgatgctcgccaatctgagattgagcgc
ctcttcagcaaatatggacgtgtggagcgtgttgacatgaagtcggggtttgcctttgtc
tacatggaagatgaacgtgatgctgatgaagctatccataggcttgacagaattgaattt
ggcagaaaagggaggagacttagggttgaatggacaaaggaggatcgcagtggtggtaga
agagggaactcaaagagatctccaaacaatacaaggccaaccaaaactttgtttgtgatc
aattttgatccaatcaacacaaggacaagagatctggagaggcacttcgatcaatatggc
aagatctcgaatgtcagaatcagaaggaactttgcctttgtccagtatgagttacaggaa
gatgctactaaagcactggagggtacaaatggaagcactcttatggacagggttatctct
gtggaatatgcacttcgtgatgatgatgagaaaaggaatggatacagcccagaaagaaga
ggccgtgatcgatctccagacaggagggactatcgcgggcggtctgcaagtccttatggc
agagggcgtgagaggggcagccctgactatggaagaggcagggagaggggcagcccggac
tatggcaggggtggtgacagaggtagccctgattatcaccgtggtgcaagtccgcaaggg
ggcaacaaaggtgatgagaggggcagcccccctaacaactacgaccgtgaacgccgtgaa
gccagccctggctatgataggccccgcagtcgctcacctgcgaggtacgagagagaatga

KEGG   Oryza sativa japonica (Japanese rice): 4328900
Entry
4328900           CDS       T01015                                 
Name
(RefSeq) serine/arginine-rich SC35-like splicing factor SCL30
  KO
K12900  serine/arginine-rich splicing factor 10
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4328900
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:osa01009]
    4328900
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:osa03041]
    4328900
Protein phosphatases and associated proteins [BR:osa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     4328900
Spliceosome [BR:osa03041]
 Common components
  Common spliceosomal components
   SR proteins
    4328900
SSDB
Motif
Pfam: RRM_1 RRM_5
Other DBs
NCBI-GeneID: 4328900
NCBI-ProteinID: XP_015626888
UniProt: Q6K542 Q6KA23
LinkDB
Position
2:complement(join(8579757..8579880,8580299..8580481,8580582..8580642,8580894..8580934,8581020..8581184,8582156..8582233,8582594..8582747,8583602..8583746))
AA seq 316 aa
MGDALSLSPRGRLAFSLANSPTLPTPASAAAAAAAAATEPRRRQAYSPDKTMRRYSPPYR
SPPRRGYGGRGRSPPRRGYGGRKEQGSGSLLVRNIPLSCRAEDLRVPFERFGPVRDVYLP
KDYYTGEPRGFAFVEFVDPYDASEAQYHMNRQVVFGREITVVLAAESRKRPEEMRSRARV
RGYSDHEGRRSSHYGRSRSRSRSRSPRYRGRPRSRSYSPAPRRRDDYSASPQRKDTHRAK
SPRRQPKEHEVDKKRRSYSPANKDGDRRDADNGYEKRSPPADSDGSPPHRRSPRQSSGSP
PGSRSRSADGSPARSD
NT seq 951 nt   +upstreamnt  +downstreamnt
atgggagacgcgctctccctctcgcctcgcggtcgcctcgctttctccctcgccaactcg
cctaccctccccacccccgcgtcggcggcggcggcagcggcagcggcagcgacggagcct
cgccggcggcaagcgtactcacccgacaaaacaatgaggaggtatagtccaccttatcgc
agtccaccaaggaggggatatggtggcagaggaagaagtccccctaggaggggatatgga
ggacggaaggaacagggttctggcagtctcctggtccgcaacatccctttaagctgcaga
gcggaggatcttagagttccttttgaaaggtttggacctgttcgagatgtttacctgcca
aaggattattataccggggaaccgcgagggtttgcattcgtggagtttgttgacccttat
gatgcttctgaggcccaatatcatatgaatcgtcaggtggtttttggccgggagataact
gttgttcttgctgctgagtcacggaaaaggccagaagagatgcgcagtagagccagagtc
agagggtactctgaccatgaaggccgtcgttcatcccattacgggaggtctcgttcacgt
tcgcgttcccgctctccccgttatcgtggtcgtccacggtcaaggtcatactctcctgct
ccaagacgacgagatgactattccgcatccccacagagaaaagacacacatcgtgcaaaa
tctcctaggcgtcagccaaaagaacatgaagtagacaagaagcggagatcctattctcct
gccaataaagatggggaccggcgtgatgctgataatggttatgaaaagaggtcgccgcca
gctgacagcgatggatcccctccgcaccggaggtcccccaggcaatcctcaggatcgcct
ccaggatcccgctccaggtctgccgacgggtctcctgcccgcagtgactaa

KEGG   Oryza sativa japonica (Japanese rice): 4329951
Entry
4329951           CDS       T01015                                 
Symbol
Os-RSZ23, Os-RSZp23, RSZ23, RSZP23
Name
(RefSeq) serine/arginine-rich splicing factor RSZ23 isoform 1
  KO
K12896  serine/arginine-rich splicing factor 7
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4329951 (Os-RSZ23)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:osa03041]
    4329951 (Os-RSZ23)
Spliceosome [BR:osa03041]
 Common components
  Common spliceosomal components
   SR proteins
    4329951 (Os-RSZ23)
SSDB
Motif
Pfam: RRM_1 zf-CCHC RRM_7 zf-CCHC_2
Other DBs
NCBI-GeneID: 4329951
NCBI-ProteinID: NP_001388831
LinkDB
Position
2:complement(join(24475544..24475718,24476362..24476620,24477509..24477597,24478664..24478752))
AA seq 203 aa
MARVYVGNLDPRVTAREIEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAEDAIRDLDG
KNGWRVELSTKAGSGRGRDRSGGSDMKCYECGEPGHFARECRLRIGSGGLGSGRRRSRSR
SRSPRYRGRSRSRSPRYRRSPSYGRRSYSPRDRSPKRRSYSRSPPPARARSYSRSPPPPR
ERSYSRSPAQPANREESPYANNA
NT seq 612 nt   +upstreamnt  +downstreamnt
atggctcgcgtgtacgtggggaacctggatccgcgcgtgacggcgcgggagatcgaggac
gagttccgcgtgtttggggttctgaggagtgtatgggttgctagaaaaccaccaggtttt
gcctttattgactttgatgaccgcagggatgcagaagatgcaattcgtgatttagatggc
aagaatggatggagggttgagctgtcaaccaaagctggtagtggtcgtggccgagatcgt
tccggtggttctgacatgaagtgctatgaatgtggcgaacctggtcattttgcacgtgaa
tgccgcttacggattggttctggaggccttggcagtggaagacgccgcagccgcagccgt
agccggagtccaaggtaccgcggtcgtagtcgcagccgcagcccaagataccggaggagc
ccaagctatggtagaaggagttacagcccacgggatcgttctccaaagaggcgcagctac
agcaggtcgccaccaccagctcgtgcacgaagctacagccgatcacctccacctcctcgt
gagcgaagctacagcagatcaccagcacagccagccaaccgcgaggagtccccctacgca
aataacgcgtaa

KEGG   Oryza sativa japonica (Japanese rice): 4330968
Entry
4330968           CDS       T01015                                 
Symbol
Os-RSZ21, Os-RSZp21, OsJ_08668, RSZP21, RSZP21B
Name
(RefSeq) serine/arginine-rich splicing factor RSZ21
  KO
K12896  serine/arginine-rich splicing factor 7
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4330968 (Os-RSZ21)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:osa03041]
    4330968 (Os-RSZ21)
Spliceosome [BR:osa03041]
 Common components
  Common spliceosomal components
   SR proteins
    4330968 (Os-RSZ21)
SSDB
Motif
Pfam: RRM_1 zf-CCHC Zn_Tnp_IS91
Other DBs
NCBI-GeneID: 4330968
NCBI-ProteinID: NP_001403910
LinkDB
Position
2:complement(join(34038930..34038966,34039071..34039181,34039452..34039683,34040899..34040987,34041469..34041557))
AA seq 185 aa
MARLYVGNLDPRVTSGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG
KNGWRVELSRNSSSRGGRDRHGGSEMKCYECGETGHFARECRLRIGPGGLGSGKRRSRSR
SRSRSPQYRKSPTYGRRSYSPRDRSPRRRSVSPVRGRSYSRSPRGRGGSPYADGRDGGRY
RRSRS
NT seq 558 nt   +upstreamnt  +downstreamnt
atggcccgcttgtatgttggcaacttggatccccgagtgacttccggggaacttgaagat
gagtttcgtgtgtttggagttctgcgaagtgtctgggttgcccgtaaaccacctggtttt
gcatttatcgattttgatgacaagagggatgctgaggatgcactccgtgatttagatggc
aagaatggatggagagttgagctctcacggaactcaagtagccgcggaggtcgtgatcga
catggtgggtctgagatgaagtgctatgagtgtggtgaaactgggcactttgctcgtgaa
tgtcgtttgcgtattggtcctggaggtctgggtagtggaaagcgtcgtagcaggagtcgc
agccgcagtcgcagccctcaataccgcaagagcccgacctatggtagaagaagctacagt
cctcgtgatcgctctccaaggcgccgcagtgtttcaccagttcgtgggcgcagctacagc
aggtcaccacgtggccgaggtggttctccttatgctgatggaagagatggtggcaggtac
cgccgtagcaggagctag

KEGG   Oryza sativa japonica (Japanese rice): 4332476
Entry
4332476           CDS       T01015                                 
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32
  KO
K12896  serine/arginine-rich splicing factor 7
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4332476
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:osa03041]
    4332476
Spliceosome [BR:osa03041]
 Common components
  Common spliceosomal components
   SR proteins
    4332476
SSDB
Motif
Pfam: RRM_1 zf-CCHC zf-CCHC_5 RRM_5 zf-CCHC_3 CLIP1_ZNF zf-CCHC_2
Other DBs
NCBI-GeneID: 4332476
NCBI-ProteinID: XP_015630497
UniProt: Q10N19 B9F7Q3
LinkDB
Position
3:complement(join(9903690..9904143,9904276..9904371,9904473..9904672,9904810..9904905,9905024..9905063,9905776..9905882))
AA seq 330 aa
MPRYDDHYGSTRLYVGRLSSRTRSRDLEYLFGRYGRIREVELKRDYAFIEFSDPRDADEA
RYNLDGRDVDGSRILVEFAKGVPRGAAGGSREYMGRGPPPGTGRCFNCGIDGHWARDCKA
GDWKNKCYRCGERGHIERNCQNSPRNLRRERSYSRSPSPRRGRGHGRSRSYSRSRSRSYS
RSRSRSLSGSPRGRRDRDDRRSRSLSYSRSPRRSISPAANGKERNPSPNGRRSPRSPQDR
VSPPPKDNDERNGDSPWGRENSRSPSDGYRSPVAANGRSPSPRNNGSPSPMDNNSRSPRD
NGSPSPRDGNGDGGSRGGSRSPRASESPEA
NT seq 993 nt   +upstreamnt  +downstreamnt
atgcctcgctatgatgatcattatggaagcacacgcttgtatgttggtagactgtcttcg
cgcactcgttctcgtgacctagaatatcttttcggcagatatggaagaatacgtgaagtg
gagttgaagcgcgactacgcgtttattgaattcagtgatccccgtgatgctgatgaagcg
cggtataacctagatggcagggatgttgatggaagccgcattcttgttgagtttgctaaa
ggagttccacgtggtgctgctggtggttcacgtgaatatatggggagaggacctcctcca
ggaacaggtcgctgttttaactgtgggattgatggtcactgggcaagagactgcaaggct
ggtgactggaagaacaaatgttaccgttgtggagaaagaggtcacatagaaagaaactgc
caaaacagtccaagaaatctcaggcgagagagaagttattcgcgctccccatcgccacgc
cgtggacgtggtcatggtcgtagtcgtagctatagccggagccggagcaggagttacagc
cgatctaggtccagatccctatctggatctcccaggggacgcagagatcgtgatgatagg
agatcaaggagtcttagctacagcagaagtcccaggcgatccatctccccagcagcaaat
ggaaaggagcgcaaccccagcccgaatggtaggcggagtccaaggagtccacaggatcgg
gtaagcccaccacccaaggataatgatgagcgcaatggtgacagcccctggggcagggag
aacagcaggagcccatctgacggctaccgtagccctgtggctgccaatgggcgcagccca
agcccaaggaacaatggaagccctagtccaatggacaacaatagccgaagcccaagggac
aacggcagcccgagccctagggatggaaatggtgatggtggtagccgtggcggctcacgc
tcgcccagagcaagcgagtcccctgaagcttga

KEGG   Oryza sativa japonica (Japanese rice): 4332806
Entry
4332806           CDS       T01015                                 
Name
(RefSeq) serine/arginine-rich-splicing factor SR34
  KO
K12890  serine/arginine-rich splicing factor 1
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4332806
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:osa03041]
    4332806
Spliceosome [BR:osa03041]
 Common components
  Common spliceosomal components
   SR proteins
    4332806
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 RRM_3 Nup35_RRM_2
Other DBs
NCBI-GeneID: 4332806
NCBI-ProteinID: XP_015633039
UniProt: Q10LL5 A0A8J8YLK6
LinkDB
Position
3:join(12870293..12870379,12870790..12870855,12870971..12871045,12871128..12871236,12871327..12871373,12871470..12871527,12872267..12872316,12872533..12872589,12872673..12872758,12872832..12872933,12873997..12874030,12874123..12874197,12874284..12874298)
AA seq 286 aa
MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEE
ACAGRDGYNFDGHRLRVEPAHGGRGNGGSSFDRPSNFGGGGRRGVSRHSEYRVLVTGLPS
SASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDSEFRNAFSKG
HIRVKEYDGKRARSYSRSRSPSRSRSKSRSLSKSPRTRRSASRSRSRSRSVSSRSRSASK
GRSPSRSPARSKSPNASPANGEASSPKKRSPSRSPSRSRSPDAKSE
NT seq 861 nt   +upstreamnt  +downstreamnt
atgagcaggcggtggagccggacgatctacgtggggaatctccctggtgacatcagggag
agggaggtggaggatctcttctacaagtatggccgaattgttgatattgacttgaagatc
cctccgaggccaccaggctatgcttttgtagagtttgaagatcctcgtgatgctgaagaa
gcatgtgctggcagggatggttataactttgatggacatcgtctaagggttgaacctgct
cacggtgggagaggtaatggtggttcctcctttgaccgccccagcaactttggtggtgga
ggacgccgtggtgtgtccaggcactcagaataccgtgttctggttactggtttgccttct
tctgcatcatggcaagatttaaaggaccatatgcgcaaggctggtgatgtttgtttctca
gaagtgtatcgcgagggcggcggtactgtagggattgtggactacacaaactatgatgac
atgaaatatgctataaagaaacttgatgacagtgaattcaggaatgccttttctaaaggt
cacataagggtgaaggaatatgatggcaagcgcgcccgctcctattcacgtagccgaagc
ccaagtcgtagccgaagcaaaagcaggagtctaagtaaatctcctagaactcgccgttca
gcatcccgatctcgatctcgatcaaggtctgtttcttcccgttcacggtcagcatcaaaa
gggcgctctccatcaagatcaccagcaagatccaaatctccaaatgcttctcctgcaaat
ggtgaagcatcaagccccaagaaacggagcccaagcaggagcccatctcgttcacggtct
cctgatgcgaaatctgaatag

KEGG   Oryza sativa japonica (Japanese rice): 4332903
Entry
4332903           CDS       T01015                                 
Name
(RefSeq) serine/arginine-rich SC35-like splicing factor SCL28
  KO
K12900  serine/arginine-rich splicing factor 10
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4332903
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:osa01009]
    4332903
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:osa03041]
    4332903
Protein phosphatases and associated proteins [BR:osa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     4332903
Spliceosome [BR:osa03041]
 Common components
  Common spliceosomal components
   SR proteins
    4332903
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 4332903
NCBI-ProteinID: XP_015632345
UniProt: Q10L03 Q0DRQ6
LinkDB
Position
3:join(14527946..14528163,14529639..14529716,14530088..14530252,14530368..14530435,14530516..14530555,14531876..14532038)
AA seq 243 aa
MAGYRSRSRSYSPQPRRRYSRSPPRYKRYDDPRDRYPRGGGGGGGGGEGPRRGYGRPPAP
TGLLVRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQ
ELNHQVIGGREISIVFAEENRKTPQEMRMRTRTSGRYMDGSHRRRSVSRSPRSRYHSYSP
SPSPARRDYRDHRDDYSPGESLSPHGQDKRHHRSNGRSASPDELERHVSPSNNGHGPPVD
GKS
NT seq 732 nt   +upstreamnt  +downstreamnt
atggccgggtaccggagccggagccggagctacagcccgcagccgcgccggaggtacagc
cggagccccccgcggtacaagcggtacgatgacccgcgcgaccgctatcctcgcggcgga
ggtggaggtggaggtggaggcgaagggccccgccgcgggtatggccggccgcctgcgccg
accgggctcctcgtccgcaacatctcgctcaccgcaaggcctgaagatattcgtattccg
tttgagcaatttggccctgtaaaggatgtctaccttccaagaaatttccatacaagggaa
ttacgtggctttgggtttgtaaaattccgctatccagaagatgctgcagtggccaagcaa
gaattgaatcatcaagttattggtggacgagagatttcaatagtttttgccgaggagaac
agaaaaaccccacaagaaatgcggatgaggacaagaacaagtggaagatacatggatggt
agccacagaaggcggtcagtatcaagatctccaaggtctcgttaccattcttattcacct
tcaccctctccagctagacgtgactacagggatcaccgtgatgattattcacctggggaa
tcactctctccacatggtcaggacaagcggcaccacagatcaaatggtcgatctgctagc
ccagatgagctcgagcgtcatgtatctccatccaataatggacatggtcctccagttgat
gggaaaagctga

KEGG   Oryza sativa japonica (Japanese rice): 4333005
Entry
4333005           CDS       T01015                                 
Name
(RefSeq) serine/arginine-rich splicing factor SC35 isoform X3
  KO
K12891  serine/arginine-rich splicing factor 2/8
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4333005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:osa03041]
    4333005
Spliceosome [BR:osa03041]
 Common components
  Common spliceosomal components
   SR proteins
    4333005
SSDB
Motif
Pfam: RRM_1 Nup35_RRM_2 Nup35_RRM YflT RRM_5
Other DBs
NCBI-GeneID: 4333005
NCBI-ProteinID: XP_015629144
UniProt: Q10KD9
LinkDB
Position
3:complement(join(15828048..15828096,15828229..15828426,15829014..15829085,15829828..15829894,15830006..15830085,15830193..15830271,15830372..15830447))
AA seq 206 aa
MSRLGRYGPPAVRDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFA
FVRYKYEDEAQKAVDKLDGRTVDGRDIMVQFAKYGPNAERIHKGRIVEEISKPRGRSRSP
SPKRRYRADYRDRGYRDDYRDRHYRDDYQDREYRRSRSIERYERERYQEKGYRRRSRSIS
PDYDRRHRKNGRPRDERSPRSRSPLT
NT seq 621 nt   +upstreamnt  +downstreamnt
atgtcgcgcctcggccgctacggcccaccggcggtccgcgactcctactccctcctcgtc
ctcaacgtctccttccgcacgacggccgacgacctcctcgcgctcttcgaccgctgcggc
gaggtcctcgacatccgcatcccccgcgaccgcaggactggggattcgagagggttcgcg
ttcgtgaggtacaagtacgaggacgaggcgcagaaggccgtcgataagctcgacgggagg
acggtggatgggagggatatcatggtgcagttcgccaagtacggcccaaatgctgaaaga
attcataaggggaggattgtagaagagatttcgaagccaagaggccgatccagaagtcct
agtccaaaacggaggtatcgtgctgactaccgagacaggggctaccgtgatgactatcgg
gacagacactatcgtgatgactatcaggacagggagtataggagaagccgaagcatagag
aggtatgaacgtgagaggtatcaagaaaaaggctatcgtcgcaggagccggagcattagc
cctgattatgacaggaggcatcgcaagaatggcaggcccagggatgaacgttctccacgc
tctcgaagccctttgacctag

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