KEGG   Oryza sativa japonica (Japanese rice): 107275757
Entry
107275757         CDS       T01015                                 
Symbol
OsJ_16761, OST1B, RPN-IB, RPN1B
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B precursor
  KO
K12666  dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00510  N-Glycan biosynthesis
osa00513  Various types of N-glycan biosynthesis
osa01100  Metabolic pathways
osa04141  Protein processing in endoplasmic reticulum
Module
osa_M00072  N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    107275757 (OsJ_16761)
   00513 Various types of N-glycan biosynthesis
    107275757 (OsJ_16761)
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107275757 (OsJ_16761)
SSDB
Motif
Pfam: Ribophorin_I
Other DBs
NCBI-GeneID: 107275757
NCBI-ProteinID: NP_001412603
LinkDB
Position
4:join(36046059..36046190,36046610..36046654,36046732..36047366,36047858..36048005,36048134..36048313,36048681..36048749,36049756..36049845,36049958..36050083)
AA seq 474 aa
MMAPSLSTAVSSLLLLLLLAAAISVSSSPPMPEDSIRVISAEKRIDLTSPIVKVFLTLKL
ENDATAPEASQVLLAFTPTEVEHLAIVKATRAEGKRKKKIYVPLSVKASDLAAAPNGARL
YSILLSTPLKPAEVTTLEVFYALTHSLEPFPAEITQSDPQLVYYRDSAVLLSPYHVLEQV
TYIKMPSNRVESFTRVDPTSRAGNEVKYGAYNNQLPNSYVPILVHYENNRPFAVVEEFVR
KVEISHWGNVQITEQYKLKHGGAQHKGVFSRLEYQSRPSISGVSSFKNLLARLPPRVHSV
YYRDEIGNISSSHLRSDSHKSELEIEPRYPLFGGWHCTFTIGYGLPLQDFLFESDDGRRY
INLTFGCPLLDTVVDDLTIKVVLPEGSTSPQAVVPFLMEQYLETSYSYLDVVGRTTVVLK
KRNVVGEHNVPFQVYYEFNPIFMLAEPLMLISAVFLFFVACIAYLHMDLSIGKS
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgatggcgccgtccttgtccaccgccgtctcctctcttctcctcctcctcctcctagcc
gctgctatctccgtctcctcctcaccgccgatgccggaggacagcatccgggtcatctcc
gccgagaaaaggatcgacctcaccagccccatagtcaaagttttcctcacactaaagctc
gagaatgatgccactgcccctgaagcatctcaagttctactcgcattcacacccacagag
gttgaacatcttgcgattgtcaaggcgaccagagcggaggggaagcgcaagaagaagata
tatgtgcctctctctgtgaaagcctctgatcttgctgccgctccaaatggtgctcgcctg
tactccattttgctgagcactccattgaaacctgctgaggtgacgacgctggaagtattt
tatgctttgacacactctttggagcccttcccagcagagatcacccagtcagatccccag
ctggtttactaccgtgacagtgctgtgcttctatctccgtaccatgttctggagcaggtt
acctacatcaaaatgccgagcaatagggtggagtcctttacaagggtggaccccaccagt
cgagctggtaatgaagtgaaatacggcgcatacaacaaccagcttccaaactcgtatgtg
cccatacttgtgcattatgaaaataatcgtccgtttgctgttgttgaggaatttgtgcgc
aaggtggagatttctcattgggggaatgtccaaatcactgagcagtataagctgaaacat
ggtggtgctcagcacaaaggagtcttttcaaggcttgagtatcaatccaggccttctata
agtggagtgtcatcatttaagaatcttcttgcaaggttgcctcctcgagttcattcagta
tactatcgtgatgagatcggcaacatatcttcatcccatttgcgtagtgattcgcacaag
tcagaacttgaaattgagcccagatatccattatttggtggttggcactgcacgttcacc
attggctatggtttgccattgcaagattttctctttgaatcagatgatggtcgacgctac
ataaatcttacttttggatgccctctgttggatacggtggtagatgatcttaccatcaaa
gtcgtgcttcctgagggatcgacaagtccacaagctgtagttcctttcctgatggaacaa
tatcttgagactagttattcataccttgatgttgttggaaggacgacagttgtactaaag
aagagaaacgtagttggagagcacaatgttcctttccaggtgtattacgaattcaatccg
atcttcatgctcgcagaaccgttgatgctgatatcagccgtgttcctgttctttgtagcc
tgcattgcttatcttcacatggatctttccattgggaaatcatag

KEGG   Oryza sativa japonica (Japanese rice): 4324876
Entry
4324876           CDS       T01015                                 
Symbol
RPN-II, RPN2
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 precursor
  KO
K12667  dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00510  N-Glycan biosynthesis
osa00513  Various types of N-glycan biosynthesis
osa01100  Metabolic pathways
osa04141  Protein processing in endoplasmic reticulum
Module
osa_M00072  N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    4324876 (RPN-II)
   00513 Various types of N-glycan biosynthesis
    4324876 (RPN-II)
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    4324876 (RPN-II)
SSDB
Motif
Pfam: Ribophorin_II Ribophorin_II_3rd Ribophorin_II_C Ribophorin_II_2nd
Other DBs
NCBI-GeneID: 4324876
NCBI-ProteinID: NP_001415095
LinkDB
Position
1:join(40330673..40330836,40330991..40331186,40331277..40331366,40331484..40331540,40331654..40331723,40332010..40332074,40332671..40332725,40332967..40333094,40333182..40333297,40333468..40333537,40333986..40334087,40334184..40334273,40334347..40334495,40334883..40334994,40335077..40335163,40336595..40336675,40336744..40336968,40337078..40337200,40337284..40337400)
AA seq 698 aa
MAAAGGLPASATLLLLVIAAVAVAPLASAVRPVSDAHRSAAAELFAASPDGSFGDLETTY
EAVRTFQILGVEKDKGLIGKACKFAAEKLASSSSSPAKDLFHAARISGVLKCSVDSGVYD
DVATRLKAVIKDTNSLLELYYSVGGLLSIKEQGHNVVLPDADNTFHAIKALSQSDGRWRY
DTNSAESSTFAAGIALEALSAVISLADSEVDSSMIAVVKNDIVKLFDTIKSYDDGTFYFD
EKHVDAAEYKGPITTSASVVRGVTSFAAVASGKLNIPGEKILGLAKFFLGIGLPGSAKDC
FNQIESLSFLENNRVFVPLVLSLPSKVFSLTSKDQLKVEVTTVFGSAAPPLRVNLVQVLG
SDSKVITTETKELQFDLDNNVHYLDIAPLKIDVGKYSLVFEISLQEQEHETIYATGGTNT
EAIFVTGLIKVDKAEIGISDNDAGTVESVQKIDLQKDTSVSLSANHLQKLRLSFQLSTPL
GKTFKPHQVFLKLKHDESKVEHLFVVPGSARQFKIVLDFLGLVEKFYYLSGRYDLELAVG
DAAMENSFLRALGHIELDLPEAPEKAPKPPAQAVDPFSKFGPKKEISHIFRSPEKRPPKE
LSFAFTGLTLLPIVGFLIGLMRLGVNLKNFPSLPAPAAFASLFHAGIGAVLLLYVLFWIK
LDLFTTLKYLSFLGVFLVFVGHRALSYLSSTSAKQKTA
NT seq 2097 nt   +upstreamnt  +downstreamnt
atggccgccgccgggggtctcccagcctcggccaccctcctcctcctcgtcatcgccgcc
gtggccgtcgctcccctcgcctccgccgtccgcccggtttccgacgcccacagatccgct
gccgccgagctcttcgccgcttcccccgacggatccttcggcgatttggagacgacgtat
gaggcggtcaggacgttccagatactcggggtggagaaggacaagggcttgattggtaag
gcgtgcaagttcgccgccgagaagctggcctcctcgtcatcgtcgcccgcgaaggatctg
ttccacgcggcccggatcagcggcgtcctcaagtgcagtgttgattccggagtttacgat
gatgtcgctacgaggcttaaggctgtgatcaaggacactaactcgctgctggaactctac
tattctgtgggagggttgctcagcatcaaggaacaaggccacaatgttgttttacctgat
gcagataacacatttcacgcaattaaggcacttagccaaagtgacggaagatggcgttat
gacactaacagcgctgaatcgagcacgtttgctgctggtatcgcactagaagcattgtct
gcagttatttcactggcagattcggaagttgactcatccatgatagctgtggtgaaaaat
gacattgtgaagctatttgacacgatcaagagctatgatgatgggacattttactttgac
gagaagcatgttgatgctgccgaatacaagggccctataacaacatctgcttcagtagta
aggggtgtcacctcttttgcagctgttgcttctgggaaattgaatatccctggtgagaaa
atactgggtttggcgaagttttttcttggtatagggctaccaggtagcgcaaaggattgc
tttaaccagattgagtcattatcattcttggaaaacaatagggtatttgttcctctggtc
ctttcacttccttccaaagtattttcgctgacctccaaagaccagcttaaggttgaagtc
accacagtatttggatctgctgcacctcctctcagagtgaatcttgtacaagtgctgggc
tctgactctaaggtcatcactactgaaaccaaggaacttcagtttgaccttgataacaat
gttcattacctggatattgctccattgaaaatagatgttgggaagtactcgcttgttttt
gagatttctcttcaggaacaagaacatgaaactatttatgctactggagggacaaatact
gaggcgatctttgtcacaggattgatcaaagttgataaggcagaaatcggaatttctgat
aatgatgctgggactgtggagtctgttcaaaagatagatctgcagaaagatactagtgtt
tctctttctgcaaaccatctgcagaagttgcggttatcttttcaactgagtacaccactc
gggaagacatttaaacctcaccaggtgttcctcaagttaaagcatgatgaaagcaaggtt
gagcatttatttgttgtaccaggctctgcaaggcagtttaaaattgttctagactttctt
ggtttggtggagaaattctactacctttctggaagatatgacctggagcttgcagttggt
gatgctgcaatggagaattcatttctacgagcccttggccatattgaattggacctgcct
gaggccccagaaaaagccccaaagcctccggcccaggctgttgatccattctcaaaattt
ggtccgaagaaggaaatatcgcacatattccgttcaccagagaagaggccacccaaggaa
ctctcatttgcgtttacgggcctcacgcttctgcctattgttgggttcttgattgggctt
atgcgtctcggggtaaacttgaagaacttcccgtccttgccagcacccgcagcatttgcc
tcacttttccatgctggaattggagcagtgctgctgctctacgttctcttctggattaag
ctggatcttttcacaaccctgaagtacctcagcttccttggtgtcttccttgtgtttgtg
ggccatagggctctatcttacctttcctccacgtcagcgaaacagaagactgcttga

KEGG   Oryza sativa japonica (Japanese rice): 4329143
Entry
4329143           CDS       T01015                                 
Name
(RefSeq) uncharacterized protein
  KO
K26501  oligosaccharyltransferase complex subunit OSTC
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00510  N-Glycan biosynthesis
osa00513  Various types of N-glycan biosynthesis
osa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    4329143
   00513 Various types of N-glycan biosynthesis
    4329143
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    4329143
SSDB
Motif
Pfam: OST3_OST6
Other DBs
NCBI-GeneID: 4329143
NCBI-ProteinID: XP_015623300
UniProt: B7EJL0 Q0E1R1
LinkDB
Position
2:12529797..12530330
AA seq 177 aa
MAPRSDSATGGAAAAQAHGSDFDSIDPLFHVLRVLPFSFLRPPRTRLRLPSNLALPSPMT
VFALILLTYFAVVSGLVYDVIVEPPGIGSVQDPATGAVRPVVFLPGRVNGQYIIEGLSSG
IMFVIGGIGIILLDLAVDRNRPRSLRVSFGGSGVAAIVIAYAMAMLFLRIKIPGYLW
NT seq 534 nt   +upstreamnt  +downstreamnt
atggcccccagatcggacagcgccaccggcggcgcggccgccgcccaggcccacggatcc
gacttcgactccatagatcccctcttccacgtcctccgcgtgctccccttctccttcctc
cggccgccgcgcacccgcctgaggctgccctccaacctggcgctcccctcccccatgacc
gtcttcgccctcatcctcctcacctacttcgccgtcgtctccggcctcgtctacgacgtc
atcgtcgagccccccggcatcggcagcgtccaggaccccgccaccggcgccgtccgcccc
gtcgtcttcctccccggccgcgtcaacggccagtacatcatcgaggggctctcctccggc
atcatgttcgtcatcggcggcatcgggatcatcctcctcgacctcgccgtcgaccgcaac
aggccccggagccttcgcgtctccttcggtggctccggcgtcgccgccatcgtcatcgcg
tacgctatggccatgctcttcctccgcatcaagatcccgggctacctatggtga

KEGG   Oryza sativa japonica (Japanese rice): 4333265
Entry
4333265           CDS       T01015                                 
Symbol
OST3
Name
(RefSeq) probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3 precursor
  KO
K19478  dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit MAGT1/TUSC3
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00510  N-Glycan biosynthesis
osa00513  Various types of N-glycan biosynthesis
osa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    4333265 (OST3)
   00513 Various types of N-glycan biosynthesis
    4333265 (OST3)
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    4333265 (OST3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:osa02000]
    4333265 (OST3)
Transporters [BR:osa02000]
 Solute carrier family (SLC)
  SLC58: MagT-like magnesium transporter
   4333265 (OST3)
SSDB
Motif
Pfam: OST3_OST6
Other DBs
NCBI-GeneID: 4333265
NCBI-ProteinID: NP_001389110
LinkDB
Position
3:complement(21226354..21227364)
AA seq 336 aa
MESPPHPLLLLLTLLVAAGAASAGADDLVAELQSLRSRSPSGVIHLTDTSITRFLSAPAP
RPYSVLVFFDAASLHSKTDLHLPQLRREFALLSASFLAHNPASADLFFADIEFSESQHSF
AQFGVNSLPHVRLVRPEHTRLAGSEQMDQSHFSRLADSMAEFVESRTGLEVGPIVRPPLV
SRNQMILLVILFLVSIPFLIKRIMDGETLFHDRRVWMAGALFIYFFSVSGGMYGIIRHTP
MFITDRSDPNKLVFFYQGSGMQLGAEGFAVGFLYTLVGLMIAMVTHLLVRVESLQIQRFT
MLAVMIIGWWAVKKVILLDNWKTGYSIHTFWPSSWR
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggagtccccaccccaccccctcctcctccttctcacgctcctcgtcgccgccggcgcc
gcctccgccggcgccgatgacctggtcgccgagctgcaatccctgcggtcccgctccccg
tcgggcgtgatccacctcaccgacacctccatcacccgcttcctatccgccccggcgccg
cgcccctactccgtgctcgtcttcttcgacgccgcctcgctccactccaagaccgacctc
cacctcccccagctccgccgcgagttcgccctcctctccgcctccttcctcgcccacaac
cccgcctccgccgacctcttcttcgccgacatcgagttctcggagtcgcagcactcgttc
gcgcagttcggcgtcaactccctcccccacgtccgcctcgtccgccccgagcacacccgc
ctcgctggctccgagcagatggaccagtcccacttctcccgcctcgccgactccatggcg
gagttcgtggagtcccgcaccggcctcgaggtcggccccatcgtccgcccgcccctcgtc
tcccgcaaccagatgatcctactcgtcatcctcttcttggtctccattccgttcctcatc
aagaggatcatggacggggagaccttgttccatgaccgacgggtttggatggctggggcg
ctgttcatttacttcttcagcgtgtccggggggatgtacgggatcatcaggcacacgccg
atgttcatcaccgaccggtccgatccaaacaagctcgtgttcttctaccaggggtctggg
atgcagctcggcgccgagggttttgcggttgggttcttgtacactctcgtggggctcatg
atcgccatggtgacacacttgctggtgagggtggagagcctgcagatccagcgttttacg
atgctggcggtcatgataattgggtggtgggcagtgaagaaggtgattcttttggataac
tggaagactggatatagcattcataccttctggcccagcagctggaggtaa

KEGG   Oryza sativa japonica (Japanese rice): 4335701
Entry
4335701           CDS       T01015                                 
Symbol
DAD-1, DAD1
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1
  KO
K12668  dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit DAD1/OST2
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00510  N-Glycan biosynthesis
osa00513  Various types of N-glycan biosynthesis
osa01100  Metabolic pathways
osa04141  Protein processing in endoplasmic reticulum
Module
osa_M00072  N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    4335701 (DAD-1)
   00513 Various types of N-glycan biosynthesis
    4335701 (DAD-1)
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    4335701 (DAD-1)
SSDB
Motif
Pfam: DAD
Other DBs
NCBI-GeneID: 4335701
NCBI-ProteinID: NP_001389283
LinkDB
Position
4:join(19967108..19967188,19967264..19967311,19967956..19968043,19968124..19968167,19968253..19968336)
AA seq 114 aa
MPRATSDAKLLIQSLGKAYAATPTNLKIIDLYVVFAVATALIQVVYMGIVGSFPFNSFLS
GVLSCIGTAVLAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG
NT seq 345 nt   +upstreamnt  +downstreamnt
atgccgagggccacgagcgatgcgaagcttctaattcagtccctgggcaaggcttatgct
gccacaccaacaaatctcaagatcattgacctctatgtggtctttgcagtcgccactgcc
cttattcaggttgtttacatgggaatagtggggtcatttcctttcaactctttcctttct
ggcgtcctctcatgcataggaactgcagtcctcgctgtttgccttcgtattcaagttaac
aaagataacaaggaattcaaggatcttcctcctgaaagggcgtttgcagatttcgttctg
tgcaatctggtgctccacttggtgatcatgaacttccttggttga

KEGG   Oryza sativa japonica (Japanese rice): 4337389
Entry
4337389           CDS       T01015                                 
Symbol
OsJ_16609, STT3-B, STT3B
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B
  KO
K07151  dolichyl-diphosphooligosaccharide---protein glycosyltransferase [EC:2.4.99.18]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00510  N-Glycan biosynthesis
osa00513  Various types of N-glycan biosynthesis
osa01100  Metabolic pathways
osa04141  Protein processing in endoplasmic reticulum
Module
osa_M00072  N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    4337389 (OsJ_16609)
   00513 Various types of N-glycan biosynthesis
    4337389 (OsJ_16609)
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    4337389 (OsJ_16609)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:osa01003]
    4337389 (OsJ_16609)
Enzymes [BR:osa01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.18  dolichyl-diphosphooligosaccharide---protein glycotransferase
     4337389 (OsJ_16609)
Glycosyltransferases [BR:osa01003]
 N-Glycan biosynthesis
  N-linked oligosaccharide
   4337389 (OsJ_16609)
SSDB
Motif
Pfam: STT3 STT3-PglB_core AglB_core-like HaoB_nitrify DUF6798
Other DBs
NCBI-GeneID: 4337389
NCBI-ProteinID: NP_001389386
LinkDB
Position
4:complement(join(35012478..35012607,35012825..35012884,35013001..35013123,35013254..35013708,35014091..35014624,35015386..35016249))
AA seq 721 aa
MAAATALDSLPAPLRSLRLKTKQQELLLRVSALALIYVLAFVVRLFSVLRYESMIHEFDP
YFNYRTTLFLSDHGFSEFWNWFDFESWYPLGRVVGGTLFPGLMVTAALLHRLLRALSLAV
HIREVCVLTAPFFAANTTLVAYAFGREIWDSGAGLVAAALIAVCPGYISRSVAGSYDNEG
VAIFALLLTFYLFVRAVNTGSLAWSLASAFGYFYMVSAWGGYVFIINLLPLYVLVLLVTG
RYSQRLYVAYNSTYVLGMLLAMQIRFVGFQHVQSGEHMAAMGVFFLLQVFFFLDWVKYLL
NDAKLFKSFLRITLTCVITVGTLALGIGTASGYISPWTGRFYSLLDPTYAKDHIPIIASV
SEHQPTAWSSFMFDFHILLFLFPAGLYFCFKRLSDATIFIVMYGLTSMYFAGVMVRLILV
AAPAVCLISAIAASATIKNLTTLIRTKSKSPQTVSGKSSGSKAAAKGAVDQSLPFQQNVA
IALLLGAFYLLSRYAVHCTWVTSEAYSSPSIVLAARGHNGGRVIFDDYREAYYWLRQNTP
SDAKIMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYEIMQSLDVNY
VLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGEYRVDKGAAPKMLNCLMY
KLCYYRFGELTTEYGKPPGYDRVRGVEIGNKDIKLEYLEEAFTTSNWIVRIYKVKPPKNR
S
NT seq 2166 nt   +upstreamnt  +downstreamnt
atggccgccgccaccgcgctggactcgctgccggcgccgctccggtcgctgcggctgaag
acgaagcagcaggagctcctgctccgggtctcggcgctggcgctcatctacgtgctcgcg
ttcgtcgtccgcctcttctccgtgctccgctacgagtccatgatccacgagttcgatccc
tacttcaactaccgcaccacgctcttcctctccgaccatggattcagcgagttctggaac
tggttcgatttcgagagctggtacccgctcggccgcgtcgtcggcggcaccctcttcccg
ggcctcatggtcaccgccgcgctgctccaccgcctcctccgcgcgctctccctcgccgtc
cacatccgcgaggtctgcgtcctcaccgcccccttcttcgccgccaacaccacgctcgtc
gcctacgccttcggccgcgagatctgggactccggcgcgggcctcgtcgccgccgcgctc
atcgccgtctgccccggctacatctcccgctccgtcgcgggctcctacgacaacgagggc
gtcgccatcttcgcgctgctgctcaccttctacctcttcgtgcgcgccgtcaacacggga
tctctcgcatggtcgctcgcctcggcgttcggctacttctacatggtctccgcgtgggga
ggctatgtcttcatcatcaatctgttgccgctgtacgtgctcgtgctgctcgtcacgggg
aggtactcgcagaggctctacgtggcctacaattccacgtatgtgcttggaatgctactt
gcgatgcagatccggttcgttgggttccaacacgtccagtctggggagcacatggccgct
atgggagtattcttccttttgcaggttttctttttcttggactgggtgaagtacctgctg
aatgatgccaaactattcaagtcattcctgagaatcaccctgacatgtgtgataactgtt
ggcaccctagctcttggaattggtaccgcgtcaggttacatctccccttggacagggcgg
ttttactccctgcttgatccaacctatgcaaaggaccatataccaatcattgcatcagta
tctgagcatcaaccaacagcgtggtcttcgttcatgtttgatttccacatccttcttttc
ctgttcccagcaggcctctacttctgtttcaagcgcttgtcagatgccacaatatttata
gttatgtatggcctcacgagtatgtactttgctggtgtgatggttcggttaattcttgtt
gcagcgccagctgtttgccttattagtgccattgcagcatcagctacaataaaaaatctg
actaccttgattcggacaaaaagcaaaagtccacaaactgtctctggaaaatcatctggc
tcaaaggcagctgcaaagggtgcagttgatcaatccttgcctttccagcagaatgtggcc
attgctttacttctgggtgctttctacttgcttagtagatatgctgtacactgcacttgg
gtgacatctgaagcttactcttctccttccattgttctggccgcaaggggtcataatgga
ggcagggtcatatttgatgattatcgtgaagcgtattattggcttcgtcagaacactcct
tctgatgcaaagattatgtcatggtgggattatggataccaaatcacagctatggggaac
agaactgttattgttgataacaacacatggaataatacacatatagctacagttgggcgt
gcaatgtcatcctatgaagatgaagcgtatgagataatgcagtcactggatgtgaattat
gtgcttgtcgtatttggtggtgttactggttattcttcagatgacattaacaagttctta
tggatggtgcgcattggtggtggagtttttcctgtaatcaaagagcctgattaccttgtt
aatggggagtatcgtgtcgacaagggggcagcaccaaaaatgttgaattgcttaatgtac
aagctttgttattaccgttttggagaactgaccacagaatatggaaaacctccaggatac
gatcgagtacgaggagtggagattggcaacaaagacattaagcttgagtacttggaggag
gcattcacaacttcgaactggatagtgcgcatatacaaggtcaaacccccgaagaatagg
tcttga

KEGG   Oryza sativa japonica (Japanese rice): 4338348
Entry
4338348           CDS       T01015                                 
Symbol
OsJ_17960, OST1A, RPN-IA, RPN1A
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A precursor
  KO
K12666  dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00510  N-Glycan biosynthesis
osa00513  Various types of N-glycan biosynthesis
osa01100  Metabolic pathways
osa04141  Protein processing in endoplasmic reticulum
Module
osa_M00072  N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    4338348 (OsJ_17960)
   00513 Various types of N-glycan biosynthesis
    4338348 (OsJ_17960)
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    4338348 (OsJ_17960)
SSDB
Motif
Pfam: Ribophorin_I HEPN_Cthe2314 TMP_3 Rh5 Fib_alpha
Other DBs
NCBI-GeneID: 4338348
NCBI-ProteinID: NP_001389438
LinkDB
Position
5:join(13606743..13606856,13606975..13607019,13607589..13608217,13608312..13608459,13608556..13608732,13609112..13609180,13609284..13609373,13609585..13609743,13610594..13610818,13610979..13611170)
AA seq 615 aa
MATPPPLRRVAALLLLLVAAASTPTARADLVVTRADRKVDLTSHIVRVLTSLKVENSGPE
AVSQFLLAFPNVQAKNLAAIRAFGTEEKVKGPSMVLPIEVVQPSGVPPELTFFSASLSKP
LEKGKTLHLDVLTVFTHSVQPFPEEITQAESQLVVYQDSAQYLSPYPVKVQTLSIRLPGG
RVESYTKYPNTKLAESELKYGPYEDLPPFSYSPMVVHYENNNPFAVAKEVIREIEISHWG
NVQITEHYNIAHGGAKLKGEFSRIDYQSRPYIRGVSSFRHLIARLPPRAHSIYYRDEIGN
ISTSHLWSDSKKTQLEVEPRFPLFGGWQTTFTIGYGLPLQDFVFNSDGKRFLNITFGSPV
EEILIEKLIVKVVLPEGSKDIDISVPFPTKQEQEVKYSHLDISGRPVVVLEKLDVIPEHN
LYFQVYYRFNNISLLREPMMLITGFFLLFMACIVYMRTDMSISKNSPSYLAKVQWDEVQS
IIQQIQAIFNQCLAAHDKLETSLHELSRSGDVKSCKVARKTADAQFKELAKELKPLLTSL
QSSSQSYQIWPKVEELVAKERELQDKLMTRHSTVVDSFEKKLRGQDVENRIAAQQQKVAA
LRQEVESLLEYISEI
NT seq 1848 nt   +upstreamnt  +downstreamnt
atggcgacgccaccgccgctccgccgcgtcgccgccctcctcctcctcctcgtcgccgcc
gcctccacccccaccgcacgggccgatctcgtcgtcaccagggcggatcggaaggttgac
ctgacttcgcacatcgttcgtgtcctcacttcgctcaaggttgagaatagtggaccggag
gctgtttctcaatttctactggcgtttcccaatgtccaagcaaagaacttagcagctata
agagcatttggtactgaggaaaaggtgaaaggtccaagtatggtccttccgattgaagtt
gttcagccttctggagtgcccccagaacttacattcttttcggcatctttatccaaacct
ttggagaaggggaagactcttcacttagatgtcctgaccgtatttacgcactctgtccag
ccattccccgaagaaatcacacaagctgaatcgcagcttgttgtctatcaggacagtgct
cagtatctgtcaccttaccctgttaaggtacagacacttagtatcagattgcctggtgga
agagttgagtcctacacaaagtacccaaacacaaaacttgcagagtcagaactaaaatat
ggaccatatgaagatcttccaccgttttcctactcccctatggttgtgcactatgagaac
aataacccttttgcagttgcaaaggaagttataagggagatagagatatctcactggggg
aatgtacagattacagaacattacaacattgctcatggtggtgccaaactcaagggtgaa
ttttccaggattgattaccaatctagaccgtacataagaggggtctcatcttttaggcat
cttattgctagactgcctccaagggcacattctatatactacagagatgagattggtaac
atttcaacatcacatttatggagtgattccaagaagactcaacttgaagttgagccaagg
tttcctttgtttggtggttggcaaacgacctttaccattggttatggtttacctcttcaa
gactttgttttcaattctgatggaaagagattcctcaatatcacatttggttctccagtg
gaggagattctcatagaaaagcttattgtgaaggttgttctgcctgaaggttcaaaggat
attgatatttcagttccatttccaacaaagcaagagcaagaggtgaagtattcacacctt
gatatttctggaaggccagtggttgtcttggagaagcttgatgttattccagagcataat
ctatatttccaggtttactacaggttcaacaacatctctctactcagagaaccgatgatg
ttgataactggcttctttctcctcttcatggcctgtattgtttacatgcgcactgacatg
tcaatctctaagaattctccttcttatctggcaaaggtgcagtgggatgaggtacagagc
atcatccagcaaatccaggctatcttcaaccaatgtctagcagctcatgataaactggag
acctcattacacgagttatctaggtcaggagatgttaaatcatgcaaagtggctcgtaag
acagctgatgcacagtttaaggaattagcaaaagagttgaagccattgttgacatccctg
cagtcatcctctcagtcttaccagatatggccaaaggtagaggaattggttgccaaggag
agagagttgcaggataagctcatgacaaggcattccactgtggttgacagctttgaaaag
aagttgcgagggcaagatgtggagaacaggattgctgcccagcagcagaaagttgctgcc
ctgaggcaagaggtcgaatctcttttagagtacatcagtgagatctga

KEGG   Oryza sativa japonica (Japanese rice): 4339143
Entry
4339143           CDS       T01015                                 
Name
(RefSeq) uncharacterized protein
  KO
K28202  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit KCP2
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00510  N-Glycan biosynthesis
osa00513  Various types of N-glycan biosynthesis
osa04141  Protein processing in endoplasmic reticulum
Module
osa_M00072  N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    4339143
   00513 Various types of N-glycan biosynthesis
    4339143
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    4339143
SSDB
Motif
Pfam: Keratin_assoc DAP10 EpsG
Other DBs
NCBI-GeneID: 4339143
NCBI-ProteinID: XP_015637783
UniProt: Q0DH81 A0A0P0WNS6
LinkDB
Position
5:complement(join(24022786..24022876,24023656..24023722,24023806..24023857,24024847..24025005))
AA seq 122 aa
MASTGGRSMALSLLLFAVTLSLLEMYRGRFASSELMTIAGGFVSSLLFLFLLTFIGNYQE
ANGVKTGWGAVVVAELTALIVAGTVHRVCITTCFLFSAGFLYEVDKLSGMILAKSESKAR
RH
NT seq 369 nt   +upstreamnt  +downstreamnt
atggcgagcacgggggggaggtcgatggcgctgtcgctgctgctgttcgcggtgacgctg
tcgctgctcgagatgtaccgggggaggttcgcctcgtcggagctcatgaccatcgccggc
ggattcgtcagctccctcctcttcctcttccttctcacgtttattggcaactatcaggaa
gctaatggagttaaaactggatggggtgcagttgttgtcgcggaacttactgcacttatt
gttgccggcactgtccatcgtgtttgcatcacaacatgcttcctgttttctgctggattt
ctctacgaggttgataagctctctggaatgattctcgcgaagagcgagtctaaagcgagg
cggcactag

KEGG   Oryza sativa japonica (Japanese rice): 4339345
Entry
4339345           CDS       T01015                                 
Symbol
OsJ_19234, P0483D07.5, STT3-A, STT3A
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A
  KO
K07151  dolichyl-diphosphooligosaccharide---protein glycosyltransferase [EC:2.4.99.18]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00510  N-Glycan biosynthesis
osa00513  Various types of N-glycan biosynthesis
osa01100  Metabolic pathways
osa04141  Protein processing in endoplasmic reticulum
Module
osa_M00072  N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    4339345 (OsJ_19234)
   00513 Various types of N-glycan biosynthesis
    4339345 (OsJ_19234)
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    4339345 (OsJ_19234)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:osa01003]
    4339345 (OsJ_19234)
Enzymes [BR:osa01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.18  dolichyl-diphosphooligosaccharide---protein glycotransferase
     4339345 (OsJ_19234)
Glycosyltransferases [BR:osa01003]
 N-Glycan biosynthesis
  N-linked oligosaccharide
   4339345 (OsJ_19234)
SSDB
Motif
Pfam: STT3 STT3-PglB_core AglB_core-like ETRAMP
Other DBs
NCBI-GeneID: 4339345
NCBI-ProteinID: NP_001389543
LinkDB
Position
5:complement(join(25929411..25929467,25929560..25929649,25929754..25929841,25929929..25930008,25930140..25930237,25930318..25930504,25930575..25930718,25930805..25931056,25931157..25931288,25931379..25931459,25931540..25931660,25932102..25932197,25932367..25932470,25932653..25932739,25932862..25932975,25933043..25933102,25933179..25933274,25933488..25933538,25933629..25933734,25933814..25933885,25934289..25934344,25934618..25934680,25934808..25934936))
AA seq 787 aa
MAEPESSTAAAGGSRLRNACGGVLCAFTLLLIGVLAFSIRLFSVIKYESVIHEFDPYFNF
RVTQFLSKNGIYEFWNWFDDRTWYPLGRVIGGTVYPGLTLTAGTIWWLLNSLNIPLSVET
VCVFTAPIFSANASWATYLLTKEAKGTGAGLMAAAILAMVPSYISRSVAGSYDNEAVAIF
ALIFTFYLYVKTLNTGSLFYATLNALSYFYMVCSWGGYTFIINLIPIHVLLCIVTGRYSS
RLYIAYAPLVILGTLLAALVPVVGFNAVMTSEHFASFLVFIILHVVALVYYIKGLLTPRL
FKVAMTLVITVGLAVCFAVIAILIALVASSPTKGWSGRSLSLLDPTYASKYIPIIASVSE
HQPPTWPSYFMDINVLAFLIPAGIISCFLPLSDASSFVVLYLVTAVYFSGVMVRLMLVLA
PAACILSGIALSEAFDVLTRSVKYQLSKLFDDSPAASGDSSAESSSASTVSTNSAKNETR
PEKTETAPKEKPSKKNRKKEKEVAESVPVKPKKEKKLLVLPMEASVLGILLLIVLGGFYV
VHCVWAAAEAYSAPSIVLTSRSRDGLHVFDDFREAYAWLSHNTDVDDKVASWWDYGYQTT
AMANRTVIVDNNTWNNTHIATVGTAMSSPEKAAWEIFNSLDVKYVLVVFGGLVGYPSDDI
NKFLWMVRIGGGVFPHIKEPDYLRDGNYRVDAQGTPTMLNCLMYKLCYYRFVETDGKGFD
RVRGYEIGKKHFKLTHFEEVFTTHHWMVRIYKLKPQKNRVRGKLKKLKSGSKASSTNAAG
RKKNPWQ
NT seq 2364 nt   +upstreamnt  +downstreamnt
atggcggagcccgagtcctccacggccgcggccggcggcagccgcctccgcaacgcctgc
gggggcgtgctgtgcgccttcaccctcctcctcatcggcgtcctcgcgttctcgatccgc
ctcttctccgtgattaagtacgagagcgtgatccacgagttcgacccctacttcaacttc
cgcgtcactcagtttttgtcgaagaatgggatctacgagttctggaactggtttgatgac
aggacatggtatccccttggccgtgtgattggcggcactgtgtatcctggtttgacattg
acagctggaaccatttggtggttgctaaattctctaaacattccgttgtcagtggagact
gtttgtgtgttcactgctccaatattctcagcaaacgcttcctgggctacttacctttta
acaaaggaagccaaaggcactggggctggattgatggcagcagctattttggcaatggtt
ccctcatacatctcaagatccgttgcaggaagctatgataatgaagccgtagcaatattt
gctttgatattcacattttatctatatgtaaagacactgaacacaggatcactcttttat
gcaacgctcaatgctctctcatatttctacatggtctgttcttggggaggttacacattc
atcatcaaccttattccaattcatgtactgttgtgcattgtcactggtcgttattcttca
cggctttacattgcttatgctccccttgttatactgggaacacttctggcagccttagta
cccgtggttggttttaatgcagtgatgacgtctgagcactttgcatcatttctggtgttc
ataatccttcatgtggttgctcttgtgtattacataaaaggacttctaactcccaggctg
ttcaaagtagctatgactcttgtcataacagttggcttggctgtttgttttgcagtaata
gctatactcatcgctttggtggcatctagccccacaaaaggatggagtgggcgcagtttg
agtctacttgatccaacctatgcaagcaagtacatccctattattgctagtgtcagcgaa
catcaaccccctacctggccctcctatttcatggatatcaacgtgttggccttcttgatt
cctgctgggatcatttcatgcttcttgcctttatctgatgcaagctccttcgtggtcttg
tacttggtcaccgcagtatatttttctggagtaatggtgcggcttatgcttgtccttgct
cctgctgcgtgcattttatctggaatcgctctttctgaggctttcgacgtcctcacaaga
tccgttaaatatcagctatcaaaattatttgatgacagccctgctgcttcaggggatagt
agtgcagagagttctagcgctagtactgtctccacaaattcagcaaaaaatgagactaga
cctgaaaaaactgaaacagccccaaaggaaaaaccatcaaagaaaaaccggaagaaggaa
aaggaagtggctgaaagtgttcctgtaaagcctaaaaaggaaaagaagcttttggtactt
cctatggaggcatctgttttgggcattttgttgctgatcgtgttaggtggtttctatgtg
gtccattgtgtgtgggcagcagctgaggcgtactcagctccttcaattgtgttgacttct
cgttcgcgtgatggattgcatgtttttgatgatttccgtgaagcctatgcatggctcagc
cataacacagatgttgatgacaaggttgcgtcctggtgggattatggttatcaaacaact
gcaatggccaacaggactgtaattgtagacaataatacttggaataatacccacatagca
acagttggaacagcgatgtcatctccagaaaaagcagcttgggagatcttcaattcttta
gatgtcaaatatgtccttgttgtatttggaggtcttgttggctaccctagcgatgatatt
aacaagttcctttggatggttcgcataggaggtggtgtattccctcacatcaaggaacct
gattatcttagggatggtaactatcgtgttgatgctcaaggcaccccaactatgctgaat
tgcctcatgtacaagctttgctattacaggttcgttgagaccgatggcaaaggttttgat
agagtaagaggatatgaaataggaaagaagcatttcaaactaacacattttgaggaggtt
ttcacaacccaccactggatggtccgtatatataaactgaaacctcaaaagaatagggtt
cggggcaagttgaagaagttgaaatctggctccaaagctagctcaacgaatgcggcgggc
cgaaagaagaacccatggcaataa

KEGG   Oryza sativa japonica (Japanese rice): 4341334
Entry
4341334           CDS       T01015                                 
Name
(RefSeq) uncharacterized protein
  KO
K26502  transmembrane protein 258
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00510  N-Glycan biosynthesis
osa00513  Various types of N-glycan biosynthesis
osa04141  Protein processing in endoplasmic reticulum
Module
osa_M00072  N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    4341334
   00513 Various types of N-glycan biosynthesis
    4341334
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    4341334
SSDB
Motif
Pfam: Ost5 DUF6338
Other DBs
NCBI-GeneID: 4341334
NCBI-ProteinID: XP_015641150
UniProt: A3BCV8 Q5Z647
LinkDB
Position
6:join(22741802..22741804,22741916..22742016,22743574..22743652,22743738..22743785)
AA seq 76 aa
MAAKAISSPVPVDWYPTLAVVMVAVGLMFTASFFIYEATSSRRNRSLAKEIATATIASVF
LGFGSLFVLLASGVYV
NT seq 231 nt   +upstreamnt  +downstreamnt
atggcggcgaaggcgatctcgagccccgtgccggtggactggtacccgacgctggccgtc
gtcatggtcgccgtcggcctcatgttcaccgcctctttcttcatctatgaagcgacttca
tccaggcgtaaccgtagcttagcaaaggagattgccacagcaaccatcgcatctgttttt
ctggggtttggatctcttttcgtgcttcttgcaagtggtgtttatgtctga

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