Oryza sativa japonica (Japanese rice) (RefSeq): 107275860 Help Entry 107275860         CDS       T01015                                  Name (RefSeq) cell differentiation protein RCD1 homolog   KO K12606   CCR4-NOT transcription complex subunit 9 Organism osa  Oryza sativa japonica (Japanese rice) (RefSeq) Pathway osa03018   RNA degradation Brite KEGG Orthology (KO) [BR:osa00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     107275860  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:osa03019]     107275860 Messenger RNA biogenesis [BR:osa03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      107275860 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rcd1 Motif Other DBs NCBI-GeneID:  107275860 NCBI-ProteinID:  XP_015625010 UniProt:  Q6K5V3 LinkDB All DBs Position 2:11694832..11699126 Genome browser AA seq 295 aa AA seqDB search MSTIQVPNPTDPELAQRLVLDLLDPDLRGHALAELRKKREMFPDLAPLLWHSFGTIIVLL QEIIVVYPVLSPPTLSLLASSRVCNALALLQCVASHPETRSHFLKAHIPLYLCSFLENTS KTRPFEYLRLTSLGVIGALVKAEGTEVINFLLQYEFVPLCLHAMAVGSELSKTVATFIIE KIVLDDAGLGYICATADRFFAVGTALAGMVTSMDDKPSPRLLKHIIHCYLRITDNPRGLE ALQTCLPTTLIDGTFNNLTKDDPTMQQWLQELLVKVRSGKMGGLPPPVQGHMPRV NT seq 888 nt NT seq  +upstreamnt  +downstreamnt atgtcaactatccaggttcctaaccctaccgaccccgaacttgctcaacggcttgttctt gatctgctagatccagatctcagagggcatgctctggctgaactacgcaagaaaagggag atgtttccagatttggctccactattgtggcactcttttggcacaattattgtgctgcta caggagattatagtagtctaccctgtcctttcacccccaacattatcattacttgcttca agtcgagtctgcaatgcgcttgcacttcttcagtgtgttgcatcccatcccgagactagg agccatttcttaaaagctcatattccattgtacctatgttcatttttggaaaataccagc aagaccagaccttttgaatacttgcggctgaccagcttgggtgtcattggtgctcttgtg aaggctgaaggtacagaagtcatcaattttctactgcaatatgaatttgttcctctctgc ctgcatgccatggcggtaggcagtgagctttcaaaaactgtggcaacttttattattgaa aagattgtcttggatgacgctgggcttggttacatttgcgctactgctgatcggttcttc gctgtggggactgccttagcaggcatggtgacctcaatggatgacaagccctccccaagg ttgttgaagcacattatccactgttaccttaggatcacagacaatcctaggggcttggag gcactgcagacttgccttcctaccacacttatagatgggacattcaacaatcttactaag gatgaccctacaatgcagcaatggctccaagaactgttggtcaaagtgaggagtggaaaa atgggaggactacctcctccagttcaaggtcacatgccgagggtttaa

Oryza sativa japonica (Japanese rice) (RefSeq): 4329079 Help Entry 4329079           CDS       T01015                                  Name (RefSeq) cell differentiation protein rcd1 isoform X1   KO K12606   CCR4-NOT transcription complex subunit 9 Organism osa  Oryza sativa japonica (Japanese rice) (RefSeq) Pathway osa03018   RNA degradation Brite KEGG Orthology (KO) [BR:osa00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     4329079  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:osa03019]     4329079 Messenger RNA biogenesis [BR:osa03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      4329079 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rcd1 Motif Other DBs NCBI-GeneID:  4329079 NCBI-ProteinID:  XP_015623768 LinkDB All DBs Position 2:complement(11339961..11346841) Genome browser AA seq 315 aa AA seqDB search MLTSEVPSPRDPELVERLILDLLDPELKRHAPSELRKKREMFQNLALLLWNSFGIVASLL QVFSKKVVLMSATLSNSTLAQEIIVVYPALSPPTLSLGASNRVCNALALLQCIASHSETR THFLQARIPLYLCAFLETDDKAKQFEYLRLTSLGVIGALVKVDDPKIINFLLENEFVPLC LHNMTIGSELSKTVATFITEKIVVDDAGLAYVCANADRFYAVGAALATVVTSMVDQPSKR LLKHVIRCYLRMSENPRGFAALQTCLPPQLKDGTFNSCLRDDPSGRHLHQQLLVKMTSGK KGGGAGNSAGRMSWG NT seq 948 nt NT seq  +upstreamnt  +downstreamnt atgttgactagtgaggttcctagccctagagaccctgaacttgttgagcgtcttattctt gatttgctagatccagaactcaaacgacatgctccttccgagctacgcaagaaaagagag atgtttcaaaacctggctctgctgttgtggaattcttttggcatagttgcttcactgctc caggtcttctccaaaaaggtggttttgatgtcagccactcttagtaattcaacattagca caagagattatagtagtctaccctgcactttcacccccaactttgtcattaggtgcttca aaccgagtttgcaatgcactagcacttcttcagtgtattgcttcacattcggagactagg acccatttcttacaagcccgcattccgttgtacctatgtgcatttttggaaactgatgac aaggccaaacaatttgagtacttgcggttgaccagcttgggtgtcattggcgctcttgtt aaggttgatgatccaaaaattatcaattttctgctggaaaatgaatttgttcctctatgc ctgcataatatgacgatcggcagtgaattatcaaaaactgtggcaacttttatcactgaa aaaattgtcgtagatgacgccggtctagcttatgtttgtgccaatgctgatcggttctat gctgtgggagctgctttagcaaccgtggttacctcaatggttgatcagccttccaagagg ttgctgaaacacgttatccgttgttacctcaggatgtcagagaatcctaggggtttcgct gcactgcagacttgccttcctcctcagctgaaagatggcacattcaacagctgtcttagg gatgatccttcagggcgacatttgcaccaacaactgctggttaagatgacaagtggaaaa aagggaggaggagctggtaacagcgctggtcgtatgtcatggggataa

Oryza sativa japonica (Japanese rice) (RefSeq): 4336974 Help Entry 4336974           CDS       T01015                                  Name (RefSeq) cell differentiation protein RCD1 homolog   KO K12606   CCR4-NOT transcription complex subunit 9 Organism osa  Oryza sativa japonica (Japanese rice) (RefSeq) Pathway osa03018   RNA degradation Brite KEGG Orthology (KO) [BR:osa00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     4336974  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:osa03019]     4336974 Messenger RNA biogenesis [BR:osa03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      4336974 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rcd1 Motif Other DBs NCBI-GeneID:  4336974 NCBI-ProteinID:  XP_015633530 UniProt:  Q0JA69 A0A0P0WEP8 LinkDB All DBs Position 4:complement(31098559..31103195) Genome browser AA seq 326 aa AA seqDB search MANLQPSLSIPPSFAGASPPSPSPIGGGGVGGGVGQPAKDMKMASAEQLVLDLCDPELRE NALLELSKKREIFQDLAPLLWHSFGTVAALLQEIVSIYSALSPPTLSPGASNRVCNALAL LQCVASHPETRILFLTAHIPLYLYPFLNTTSKTRPFEYLRLTSLGVIGALVKVDDTEVIS FLLQTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGSVLANM VVSLAEQPSTRLLKHIIRCYLRLSDNSRACAALQTCLPDMLKDGTFNNCLRDDPTTRRWL QQLLLNVTGAGMGAAPQPGLDHMMGI NT seq 981 nt NT seq  +upstreamnt  +downstreamnt atggcgaatctgcagccctcgctttccattccgccctccttcgccggggcctcgccgcca tcgccttctccgatcggcggcggtggcgtgggcggcggggtggggcagccagccaaggat atgaagatggcgtcggcggagcagctggtgctcgacctctgcgaccccgagcttcgcgag aacgccctcctcgagctctcgaagaaaagagagatatttcaagatctggccccacttctt tggcattcttttggaacagttgctgcacttcttcaggaaattgtgtcaatctactctgca ctttcacccccaacattgtcaccaggtgcatcgaaccgagtctgcaatgcacttgcactt cttcagtgtgttgcatctcaccctgagaccaggatccttttcttaactgctcatattccc ctgtacctgtacccattcttgaatactaccagcaagacaagaccttttgaatacctgcga ctcaccagcctgggtgtcatcggtgcacttgttaaggttgatgatactgaagttatcagt tttctgctgcaaactgaaataattcctctgtgtttgcgtaccatggaaatgggaagtgag ctgtcaaaaactgtggccaccttcattgttcagaagattctcctcgatgatgttggattg cgctacatttgtgccactgctgagcgtttctttgctgtaggcagtgttttagcaaacatg gtggtttcacttgctgagcagccttccacaaggttgctgaagcacattatccgatgttac cttaggctgtcagacaattccagggcatgtgctgcactacaaacttgcctccctgacatg ctgaaggatggcacgttcaataactgtcttagggatgatcctacaacaaggcgctggctc cagcaattgcttcttaatgtgacaggcgcaggcatgggagctgctcctcagccaggcctg gatcacatgatggggatataa

Oryza sativa japonica (Japanese rice) (RefSeq): 4343622 Help Entry 4343622           CDS       T01015                                  Name (RefSeq) cell differentiation protein RCD1 homolog   KO K12606   CCR4-NOT transcription complex subunit 9 Organism osa  Oryza sativa japonica (Japanese rice) (RefSeq) Pathway osa03018   RNA degradation Brite KEGG Orthology (KO) [BR:osa00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     4343622  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:osa03019]     4343622 Messenger RNA biogenesis [BR:osa03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      4343622 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rcd1 Motif Other DBs NCBI-GeneID:  4343622 NCBI-ProteinID:  XP_015644592 UniProt:  Q0JA69 A0A0P0WEP8 LinkDB All DBs Position 7:22659388..22664105 Genome browser AA seq 326 aa AA seqDB search MANLQPSLSIPPSFAGASPPSPSPIGGGGVGGGVGQPAKDMKMASAEQLVLDLCDPELRE NALLELSKKREIFQDLAPLLWHSFGTVAALLQEIVSIYSALSPPTLSPGASNRVCNALAL LQCVASHPETRILFLTAHIPLYLYPFLNTTSKTRPFEYLRLTSLGVIGALVKVDDTEVIS FLLQTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGSVLANM VVSLAEQPSTRLLKHIIRCYLRLSDNSRACAALQTCLPDMLKDGTFNNCLRDDPTTRRWL QQLLLNVTGAGMGAAPQPGLDHMMGI NT seq 981 nt NT seq  +upstreamnt  +downstreamnt atggcgaatctgcagccctcgctttccattccgccctccttcgccggggcctcgccgcca tcgccttctccgatcggcggcggtggcgtgggcggcggggtggggcagccagccaaggat atgaagatggcgtcggcggagcagctggtgctcgacctctgcgaccccgagcttcgcgag aacgccctcctcgagctctcaaagaaaagagagatatttcaagatctggccccacttctt tggcattcttttggaacagttgctgcacttcttcaggaaattgtgtcaatctactctgca ctttcacccccaacattgtcaccaggtgcatcgaaccgagtctgcaatgcacttgcactt cttcagtgtgttgcatctcaccctgagaccaggatccttttcttaactgctcatattccc ctgtacctgtacccattcttgaatactaccagcaagacaagaccttttgaatacctgcga ctcaccagcctgggtgtcatcggtgcacttgttaaggttgatgatactgaagttatcagt tttctgctgcaaactgaaataattcctctgtgtttgcgtaccatggaaatgggaagtgag ctgtcaaaaactgtggccaccttcattgttcagaagattctcctcgatgatgttggattg cgctacatttgtgccactgctgagcgtttctttgctgtaggcagtgttttagcaaacatg gtagtttcacttgctgagcagccttccacaaggttgctgaagcacattatccgatgttac cttaggctgtcagacaattccagggcatgtgctgcactacaaacttgcctccctgacatg ctgaaggatggcacgttcaataactgtcttagggatgatcctacaacaaggcgctggctc cagcaattgcttcttaatgtgacaggcgcaggcatgggagctgctcctcagccaggcctg gatcacatgatggggatataa

Oryza sativa japonica (Japanese rice) (RefSeq): 9272009 Help Entry 9272009           CDS       T01015                                  Name (RefSeq) cell differentiation protein RCD1 homolog   KO K12606   CCR4-NOT transcription complex subunit 9 Organism osa  Oryza sativa japonica (Japanese rice) (RefSeq) Pathway osa03018   RNA degradation Brite KEGG Orthology (KO) [BR:osa00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     9272009  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:osa03019]     9272009 Messenger RNA biogenesis [BR:osa03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      9272009 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rcd1 Motif Other DBs NCBI-GeneID:  9272009 NCBI-ProteinID:  XP_015629837 UniProt:  Q10CF3 A0A8J8YK26 LinkDB All DBs Position 3:complement(32570053..32576109) Genome browser AA seq 330 aa AA seqDB search MANLPPSLSIGAASFAAPSPPPPSPGASSSSSAAAAAAPGAAKDRKMASAEQLVLDLCDP ELRENALLDLSKKREIFQDLAPLLWHSYGTIAALLQEIVSIYPSLSPPTLSPGASNRVCN ALALLQCVASHSDTRIPFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGVIGALVKVDDS EVIGFLLQTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVASV LSQMVQALADQPSPRLLKHIIRCYLRLSENSRACTALNSCLPNALKDGTLNNFLQDDHVT RRWLQQLLHNMTMAGMGGAPHGGLDHIMGM NT seq 993 nt NT seq  +upstreamnt  +downstreamnt atggcgaatctgccgccgtcgctctccatcggcgccgcctccttcgccgcgccctcgccc ccgccgccctcgcctggcgcctcctcgtcgtcgtcggcggcggcggcggcggctccgggg gccgccaaggaccggaagatggcgtccgcggagcagctcgtgctcgacctctgcgacccc gagctgcgggagaacgccctcctcgacctctccaagaagcgagagatttttcaggatctt gctccactcctgtggcactcttatggaacaattgctgcactactccaggagattgtgtca atctatccatcactttcacccccaacattatctccaggggcttcaaaccgtgtctgcaat gcacttgcacttcttcagtgtgttgcctcacacagtgacacaaggattcctttcttgaat gctcacatcccactgtatctgtaccctttcttgaatactactagcaagacaaggcctttt gagtacttgaggcttaccagcttgggtgtcattggcgcacttgtgaaggttgatgattct gaagtcattgggtttctgctgcaaactgaaataattcctctgtgtctccgtactatggag atgggcagtgaactttcgaaaacggttgccacctttattgttcaaaagattctgcttgat gatgttgggcttcgctacatatgtgctactgctgaacgtttctttgccgtagccagtgtt ctatcacagatggttcaggcacttgctgatcaaccttctccaagactgctgaagcacata attcgctgctacctcaggctgtcagaaaattccagggcatgtaccgcgctgaacagctgc ctccccaacgcgctgaaagatggaaccctcaacaacttcctccaggatgatcatgtcaca aggcgttggctccagcagctgctgcacaacatgactatggccggcatgggaggagctcct catggaggccttgatcacatcatggggatgtga

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