Oryza sativa japonica (Japanese rice): 107276037
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Entry
107276037 CDS
T01015
Name
(RefSeq) 26S proteasome regulatory subunit 6B homolog
KO
K03063
26S proteasome regulatory subunit T3
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
107276037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
osa03051
]
107276037
Proteasome [BR:
osa03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
107276037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_16
AAA_5
AAA_14
AAA_22
RuvB_N
TsaE
Sigma54_activat
TIP49
DUF815
AAA_18
IstB_IS21
AAA_33
NACHT
Mg_chelatase
nSTAND3
Prot_ATP_ID_OB_N
AAA_7
AAA_28
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
107276037
NCBI-ProteinID:
XP_066160106
LinkDB
All DBs
Position
9:26705107..26706453
Genome browser
AA seq
448 aa
AA seq
DB search
MALRPPRPCPAGVQQRQHDVDGAGNAKTSPEQKLELLDLQEEDDELIFLDADDEEGRQLR
EKLESLEREFCLLDEQRDNALFQIHVLEETVRFREELVRRLTAVTPLVVAQLDEVVDEHH
AVVTLGDGCERKMCVGVAGSLDRGLLKPSANVALNGRSLALVGVPPSDVAACSAARFLVA
DADKPGVAYDDIGGCEAQKREVREAVELPLTHPELFAAAGVDPPRGVLLHGPLGTGKTML
AKAVARETSAAFFRVNAAELARHDGPRVVRDLFRLARDMAPAIVFIDEVDAIAAARQGGD
DDDGGARRHVQRVLIELLTQMDGFDESTNVRVIMATNRADDLDPALLRPGRLDRKVEFTA
PESPEEKRLVLQTCTAGMSLDGDVDLDALAARRDKLSAAEIAAVCRKAGMQAVRDRRGAV
TADDFDKGYLAVVGKKPGDAATEFHFYN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcgctccgaccaccgcggccgtgtccggccggcgtgcagcagcggcagcacgacgtc
gacggcgccggcaacgccaagacttccccggaacagaagctcgagttgctggacctgcag
gaggaggacgacgagctcatcttcctcgacgccgacgacgaggagggacgccagctgcgc
gagaagctggagtcgctggagcgggagttctgcctgctggatgagcagcgggacaacgcg
ctgttccagattcacgtgctggaagagacggtgcgcttccgcgaggagctcgtcaggcgg
ctgacggcggtcacccccctcgtcgtcgcccagctcgacgaggtcgtcgacgagcaccac
gccgtcgtgacgctgggcgacggatgcgagaggaagatgtgcgtcggcgtcgccggctcg
ctcgaccgcggcctcctcaagccctcggcgaacgtcgcgctgaacggccggtcgctcgcg
ctcgtcggcgtgcccccctccgacgtcgccgcctgctcggccgcgcggttcctcgtcgcg
gacgccgacaagccgggcgtcgcctacgacgacatcggcgggtgcgaggcgcagaagcgg
gaggtgcgcgaggccgtggagctgccgctgacgcacccggagctcttcgccgccgccggc
gtcgacccgccgcgcggcgtgctcctgcacggcccgctgggcaccgggaagaccatgctc
gccaaggccgtcgcgcgggagacctcggcggcgttcttccgcgtgaacgccgccgagctc
gcgcggcacgacgggccgagggtggtgcgcgacctgttccggctcgccagggacatggcg
ccggccatcgtcttcatcgacgaggtggacgcgatcgcggcggcgcggcaaggcggcgac
gacgacgacggcggtgccaggcgccacgtgcagcgcgtgctgattgagctgctcacccag
atggacggcttcgacgagtccaccaacgtgcgggtgatcatggcgacgaaccgcgccgac
gacctggacccggcgctgctccggccggggcggctggaccgcaaggtcgagttcacggcg
cccgagagcccggaggagaagcggctggtgctgcagacgtgcacggcggggatgagcctg
gacggcgacgtcgacctcgacgccctggcggcgcggcgcgacaagctcagcgccgccgag
atcgccgccgtgtgccgcaaggccggcatgcaggccgtgcgcgacaggcggggcgccgtg
acggcggacgacttcgacaagggatacctcgccgtcgtcggcaagaagcccggcgacgcc
gccaccgagttccacttctacaactga
Oryza sativa japonica (Japanese rice): 4329182
Help
Entry
4329182 CDS
T01015
Name
(RefSeq) 26S proteasome regulatory subunit 6B homolog
KO
K03063
26S proteasome regulatory subunit T3
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
4329182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
osa03051
]
4329182
Proteasome [BR:
osa03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
4329182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_5
AAA_16
AAA_lid_3
AAA_2
AAA_22
DUF815
nSTAND3
RuvB_N
AAA_28
TIP49
RNA_helicase
Mg_chelatase
Sigma54_activat
AAA_14
IstB_IS21
Parvo_NS1
TsaE
AAA_24
AAA_7
AAA_18
AAA_30
DUF5906
NACHT
AAA_25
NTPase_1
AAA_3
AAA_11
AAA_33
ATPase
NB-ARC
DUF6570
ABC_tran
AAA_17
AAA_19
Motif
Other DBs
NCBI-GeneID:
4329182
NCBI-ProteinID:
XP_015626952
UniProt:
Q6Z875
A0A0P0VIC3
LinkDB
All DBs
Position
2:join(13095004..13095501,13096063..13096293,13096794..13096952,13097194..13097346,13098330..13098413,13099198..13099332)
Genome browser
AA seq
419 aa
AA seq
DB search
MSTAATAPPPAAVLPAAPPPSYPATSAPSASAAAAEDDDDLYGRLKSLQRHMEFVEIQEE
YVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDGNNGIVGSTTGSNYYVRILSTI
NRELLKPSASVALHRHSNALVDVLPPEADSSISLLGSSEKPNVTYTDIGGCDIQKQEIRE
AVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKY
LGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGF
DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVD
LEDYVSRPDKISAADIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPETDFDFYK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgccgccaccgccccgccgcccgccgcggtcctcccggcggctcccccgccg
tcctaccccgccacctccgcgccctccgcctccgcggccgccgccgaggacgacgacgac
ctctacggccgcctcaagtcgctccagcgccacatggagttcgtcgagatacaggaggag
tacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcaggaggaggtg
aagcggatccagtccgttcccctcgtgatcggccagttcatggagatggtcgacggcaac
aacggaatcgtcggatccaccaccgggagcaactattatgtgcggatcctgagcaccatc
aaccgcgagctgctcaagccctcggcgtccgtggcgctgcaccgccactcgaatgcgctc
gtcgacgtgctgccgcccgaggcggactccagcatctctctgctcggatcatcggagaag
cccaacgtcacttatacggatattggaggatgtgacatccaaaaacaagaaattcgggag
gctgttgaattaccgctgacacatcatgagctgtacaagcagattggtattgatcctcca
agaggtgtgcttctgtatggtccacctggaactggcaaaactatgctcgccaaagctgtg
gcacaccacactactgctgcatttatcagagttgttggttcagagtttgtgcagaagtac
ctgggtgagggacctaggatggttcgagatgtattccgtttggctaaagagaatgcccca
gctatcatattcatcgatgaggttgatgctatagcaactgctcgttttgatgctcagact
ggtgctgaccgagaagttcagcgtattcttatggaactactcaatcagatggatggattt
gatcaaacagtgaatgtgaaggttataatggcgaccaacagggcggataccctagaccct
gctctgttacgtccaggtagattggacaggaaaatcgagttccctcttccagatcgtcgg
cagaagaggcttgttttccaagtctgtactgctaaaatgaacttgagtgatgaggttgat
ttggaagattatgtttccagaccagataaaattagtgctgctgatattgctgctatctgt
caagaagctggtatgcatgctgtgcgcaaaaatcggtatgttatcctccccaaggacttc
gagaagggttaccgaaccaatgtcaagaagcctgagactgactttgacttctacaaatga
DBGET
integrated database retrieval system
