Oryza sativa japonica (Japanese rice): 107276326
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Entry
107276326 CDS
T01015
Name
(RefSeq) putative 4-coumarate--CoA ligase-like 8
KO
K10526
OPC-8:0 CoA ligase 1 [EC:6.2.1.-]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00592
alpha-Linolenic acid metabolism
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Module
osa_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
107276326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
107276326
NCBI-ProteinID:
XP_025883017
LinkDB
All DBs
Position
7:complement(join(26832836..26832967,26833106..26833211,26833448..26833995,26837376..26838419))
Genome browser
AA seq
609 aa
AA seq
DB search
METELHLAAGYCAATGVYRSGHPPQFAAAAALSFPEYILPHMLLPGRRARPAFVDASTGA
ALSFAGLRALSLRVARALAAAGLRRGRVALLLSPNSLHFPALSLAVLSLGAVLSAANPLL
TPDELARQADDAKPFLALVTGELAPKLRSIAPDVKLVLVEQLLADVAAEVDDDETLDLPA
ANIGRDDAALLFYSSGTTGRSKGVVSTHGNAIAMAASLERAWGGGGGGGEKPQQYDDHDE
AYGCVLPMFHMFGFSSFVMGTAALGATAVVVPGRFSVEKTMAAVEEYGVTRLLVVPPMVV
KMVAAAAGDGEPSRRRLRLRQVVSSGAPLQREHMARFRSCFPAVNLGQCYGLTETTGIVT
MCDLQHNDNGIDKVEMPPSSTDMTFVAVAATTTEVKERSTGGGGGGGGVSIGRLMPDVEA
KIVDPDSGELLPPRRTGELWVRGPSTMRGYLNNEEATALALVAAAGSVSVSGGGERWLRT
GDLCYVDSRGLVYVVDRVKELIKCNAYQVAPAELEDVLATHPDIHDAAVAPYPDKEAGEI
PMAYVVKKQGSGHLQEDEVISFVQNKVAPYKKIRKVVFVDSIPRSPSGKILRRQLKNLLQ
GSILHRSRM
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggagacggagttgcacctcgccgccggctactgcgccgccacgggcgtctaccggagc
ggccaccctccgcagttcgccgccgccgccgcgctctccttcccggagtacatcctcccg
cacatgctcctccccggccgccgagcccgcccggccttcgtcgacgcctccaccggcgcc
gcgctctccttcgccggcctccgcgcgctctcgctccgcgtcgcgcgcgcgctcgccgcc
gccggcctccgccgcggccgcgtcgcgctcctcctgtcgccgaactcgctccacttcccc
gcgctctcgctcgccgtgctctccctaggcgccgtgctctccgccgccaacccgctcctc
acgcccgacgagctcgctcggcaagccgacgacgcgaagcctttcctcgcgctcgtcacc
ggcgaactcgcccccaagctccgctccatcgcgcccgacgtcaaacttgtcctcgtcgag
cagctcctcgccgacgtcgccgcagaggtcgacgacgacgagacattggatctgccggcg
gcgaacattggccgcgacgacgcggcgctgctgttctactcgtcggggacgacggggagg
agcaagggcgtggtgagcacgcacggcaacgcgatcgccatggccgcgtcgctggagcgc
gcgtggggtggcggcggcggcggcggcgagaagccgcagcagtacgacgaccacgacgag
gcgtacggctgcgtgctgcccatgttccacatgttcggcttctcgtcgttcgtgatgggg
acggcggcgctgggcgccacggcggtggtggtccccggcaggttctcggtggagaagacg
atggcggcggtggaggagtacggggtgacgaggcttctggtcgtgccgccgatggtcgtg
aagatggtcgcggcggcggccggcgacggcgagccgtcgcggcgtcgtctccggctgcgg
caggtggtgtcgtccggcgcgccgttgcagcgcgagcacatggcgcgcttccgcagctgc
ttcccggcggtcaacctcggccagtgctacgggctaacggagacgacgggcattgtcacc
atgtgcgatctgcagcacaacgacaacggcatcgacaaggtggaaatgccaccgtcatcg
acggatatgacgttcgtcgctgttgcagcgacgacgacggaggtgaaggagagaagcacc
ggcggcggcggcggcggcggtggcgtctcgattgggcggctcatgccggatgtggaggcc
aagatcgtggacccggactccggcgagctcctcccgccccgccgcaccggcgagctctgg
gtccgaggcccctccaccatgcgaggctacctgaacaacgaggaggcgaccgccctggcc
ctggtcgccgccgccggctctgtctccgtctccggcggcggcgagcggtggctgcggacc
ggtgacctgtgctacgtggactcgcgtgggctggtgtacgtggtagacagggtgaaggag
ctgatcaagtgcaacgcctaccaggtggctccggccgagctggaggacgtcttggccacc
caccctgacatccacgacgcagccgtcgcgccgtatcccgacaaggaggccggcgagatc
ccgatggcatatgtggtcaagaaacaaggcagcggccatcttcaggaagatgaagtcatt
tcctttgtacagaacaaggtggcgccatacaagaagatcaggaaagtggtgttcgttgac
tccattccaaggtctccttcaggcaaaatcctcaggcgccagctgaaaaacttgctacag
gggtctatcctgcatcgaagcaggatgtaa
Oryza sativa japonica (Japanese rice): 4331515
Help
Entry
4331515 CDS
T01015
Symbol
4CLL4, OsJ_09299
Name
(RefSeq) 4-coumarate--CoA ligase-like 4
KO
K10526
OPC-8:0 CoA ligase 1 [EC:6.2.1.-]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00592
alpha-Linolenic acid metabolism
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Module
osa_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
4331515 (4CLL4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
4331515
NCBI-ProteinID:
NP_001404106
LinkDB
All DBs
Position
3:join(1830275..1831502,1832875..1833020,1833128..1833195,1833282..1833384,1833524..1833637)
Genome browser
AA seq
552 aa
AA seq
DB search
MGRSPEMEVDARSGYCAATRTFRSRRADVPLPADPEVDVVSFLASRRHSGVVALVDAATG
RRITFTELWRAVAGAASALAAHPVSLRKGHVALILSPNSVHFPVAALAAMSLGAVLTTAN
PLNTPAEIAKQVADARPVLAFTTRELLPKLPRAHDLRVVLLESARLPGDSSDPRIVATIE
EISATTPDPARRKDRVTQDDPATLLYSSGTTGPSKGVVATHRSLISMVQIIMTRFRLEGS
DKTETFLCTVPMFHVYGLVAFATGLLGCGATVVVLSKYELPEMLRSINAYGVTYLPLVPP
ILVAMVAHPKPLPLGQMRKVLSGGAPLGKELIEGFREKYPQVEILQGYGLTESTAIGAST
DSAEESRRYGTAGLLSPNTEAKIVDPDSGEALPVNRTGELWIRGPYVMKGYFKNAEATQS
TLTPDGWLKTGDLCYIDEDGYLFVVDRLKELIKYKGYQVPPAELEALLLTHPEVTDVAVI
PFPDREVGQFPMAYIVRKKGSNLSEREVMEFVAKQVAPYKKVRKVAFVTDIPKNASGKIL
RKDLIKLATSKL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgggacgctcaccggagatggaggtggacgcgcgcagcggctactgcgccgccacccgc
acgttccggagcaggcgcgccgacgtgccgctgcccgccgacccggaggtcgacgtggtc
agcttcctcgcctcgcgccgccactcgggcgttgtggccctcgtcgacgccgcgactggg
cgccggatcaccttcaccgagctctggcgcgccgtggccggggcggcatccgccctcgcc
gcgcaccccgtctccctccgcaagggccacgtcgcgctcatcctctcccctaactccgtc
cacttccccgtcgccgccctcgccgccatgtcgcttggcgccgtcctcaccaccgccaac
ccgctcaatacccccgccgagatcgccaagcaggtcgccgacgcccgccccgtcctcgcc
ttcaccacccgcgagctcctccccaagctcccgcgtgcccacgacctccgcgtcgtcctc
ctggaatccgcccgcctccccggcgacagctccgacccgcggatcgtcgccaccatcgag
gagatctccgccacgacgcccgacccggcgcgccgcaaggaccgcgtcacgcaggacgat
ccggccaccctgctctactcctcggggacgacggggccaagcaagggcgtcgtcgccacg
caccggagcctcatctccatggtccagatcatcatgacgcgattccgcctcgagggctcg
gacaagacagagacattcctctgcacggtgcccatgttccacgtctacggcctcgtcgcc
ttcgccacggggctgctcggttgcggcgccacggtggtcgtgctctccaagtacgagctc
ccggagatgctgcgctcgatcaacgcctacggggtgacctaccttccgctcgtgccgccg
atcctggtcgccatggtggcgcacccgaagccgctcccgctcgggcagatgcgcaaggtg
ctatccggcggcgcgccgctgggcaaggagctgatcgaagggttcagggagaagtatccg
caggtggagatcctgcaggggtacgggctgacagagagcaccgccatcggcgcgtccacg
gactccgccgaggagagccgccggtacgggacggccgggcttctgtctcccaataccgag
gctaagattgtcgacccagattccggcgaggcgctgccggtaaaccgcaccggcgagctc
tggatccgtggaccgtacgtcatgaaaggctacttcaagaacgcagaggcaacacagtca
acgctgacaccagatggatggctaaagaccggtgatctctgctacatagatgaggatgga
tatctcttcgtagtggaccgcctcaaggagttgatcaaatacaaaggttaccaggtgcct
ccggcagaactggaagctcttttgttgacgcacccagaggttacggatgttgccgttata
ccgtttcctgatagggaggtcggccagttcccgatggcctatatagtgaggaagaaagga
agcaacttgtcagagcgcgaggtgatggagtttgtggcaaaacaggttgcgccttacaag
aaggttagaaaggtggcgtttgtgacggacattcccaagaatgcatccgggaagatactg
aggaaggatcttattaagcttgccacatccaaactatga
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integrated database retrieval system
