KEGG   Oryza sativa japonica (Japanese rice): 107276545
Entry
107276545         CDS       T01015                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107276545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:osa04121]
    107276545
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107276545
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    107276545
SSDB
Motif
Pfam: Sina_ZnF Sina_RING zf-C3HC4_3 zf-RING_5 zf-Di19
Other DBs
NCBI-GeneID: 107276545
NCBI-ProteinID: XP_015622136
UniProt: A0A0P0UXX3
LinkDB
Position
1:complement(join(1341077..1341772,1341882..1342094))
AA seq 302 aa
MQMQFPHLATMMRLKKKGTMDNTGTPKRTRWSENKAQQDGKDETTKLTYSIERDALECPI
CFVPFEDRVYMCKNGHAACGSCYAKMNTMCPCCIEPIGNIRCRPLEKVLAAMSAPCRFST
SAYMRLIRASGCTEIVAYTERRNHEASCPHAPCVCPFDGCNYQGHLLYSHIQDEHATDAA
VVATGCLRGTGTTVTLHKSKPFHVLLHRGGSRVFLLLNGDNVLSGRSLSLVCISPPPPLP
NCELLYKIELGAVSRAPGELGLSMSGTVPCVRRLEGFDAKAFLFVPDSYWGSSGTISVTV
HL
NT seq 909 nt   +upstreamnt  +downstreamnt
atgcagatgcagttccctcacttagcaacaatgatgcgtttgaagaagaagggtacgatg
gataatactggtacgcccaagaggacgaggtggtcggagaacaaggctcagcaggacggg
aaagatgagacgaccaagctgacctactccatcgagcgtgacgcactggagtgtcccatt
tgcttcgttccttttgaagatcgagtttacatgtgcaagaacggccacgctgcgtgcggc
tcctgctacgccaagatgaacaccatgtgcccgtgctgcatcgagcccatcggtaacatc
cggtgcaggccgctggagaaggtgcttgcggccatgtctgctccctgcaggttcagcacg
agcgcctacatgaggttgatcagggcgagcggctgcacggagatcgtcgcctacaccgag
aggcggaatcacgaggcgtcgtgcccacacgccccgtgtgtctgcccgttcgacggctgc
aactaccagggacacttgctgtacagccacatccaggacgaacacgccacggacgccgcc
gtcgtcgccacaggctgtctccggggcaccggcaccaccgtgacgctgcacaagagcaag
ccgttccacgtgctcctccaccgcggcggcagccgcgtcttcctcctgctcaacggcgac
aacgtcctgtcgggccgctcgctgtcgctggtctgcatcagccctcctcccccgttgccc
aactgcgagctgctgtacaagattgagcttggcgccgtgtcgcgggcccccggcgagctc
ggtctgtccatgtcgggtaccgtcccgtgcgtccgccggctggaggggttcgacgcgaag
gcgttcctgttcgtgcccgattcttactggggctcgtccggcaccatctctgtcaccgtg
cacctctga

KEGG   Oryza sativa japonica (Japanese rice): 112937424
Entry
112937424         CDS       T01015                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 9
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112937424
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:osa04121]
    112937424
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112937424
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    112937424
SSDB
Motif
Pfam: Sina_ZnF Sina_RING zf-C3HC4_3 zf-RING_5 zf-RING_UBOX zf-C3HC4_2 zf-RING_14 zf-TRAF_2
Other DBs
NCBI-GeneID: 112937424
NCBI-ProteinID: XP_025877858
LinkDB
Position
12:join(592575..592673,592767..593129)
AA seq 153 aa
MAARRRSSIATINMEALDCAICYNPLEPPVFFHCGVGHVICSSCHGKLADRSSYHVCNIV
SGYNRCIAVDHILYAITVPCPNAAHGCAVRMTYHDVDEHAGRCPHAPCFCPEPVCGFAAG
GPAALLAHFTGMHGWPVTGMRRNSTFGVEVREG
NT seq 462 nt   +upstreamnt  +downstreamnt
atggccgccaggcggagaagctccatcgccaccattaatatggaagctctggactgcgcc
atctgctacaaccctctcgaacccccagtcttcttccattgtggagttgggcatgtcatc
tgttcatcctgccatggcaagctcgccgacaggagcagctaccacgtctgcaacatcgtc
tccggctacaaccgctgcatcgccgtcgaccacatcctgtacgccatcacggtgccctgc
cccaacgccgcccacggctgcgccgtcaggatgacctaccacgacgtcgacgagcacgcc
ggcaggtgcccgcacgcgccgtgcttctgcccggagccagtctgcggcttcgccgccggc
ggccccgccgcgctgctcgcccacttcaccggtatgcacggctggccggtcaccgggatg
aggcgcaacagcacgttcggcgtcgaggtgcgggaagggtag

KEGG   Oryza sativa japonica (Japanese rice): 112937615
Entry
112937615         CDS       T01015                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 5
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112937615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:osa04121]
    112937615
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112937615
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    112937615
SSDB
Motif
Pfam: Sina_ZnF Sina_RING
Other DBs
NCBI-GeneID: 112937615
NCBI-ProteinID: XP_025878219
LinkDB
Position
1:join(1248175..1248540,1248846..1249583)
AA seq 367 aa
MTQQLTFGEMISSDRSQKHLSATQEKGGQLPRPLEWSGDMVEQNKRARANGEVKQEQQQE
EEEEVEEGEVSQEETQRTGAFPLVTMAAMEQTEEETQIDVRIAVALLHCHACLQPLKPPV
FKCDEAHIVCSGCRCGHHGQLCGGAAVYSHCAELDAIVATAKVPCAHAPYGCSSYVVYAG
VADHQRACPCAPCSCPEPGCRFRSSPAALPGHLAAGHSWPVAEIAYGKPRKLAVPPPAHV
LVGEADRAVFLVSSCAVGAGAAVCVVCVRANGGGDNAAAVARYKCKLWVEVPSNDDNMAM
MTSMVRSSDLAGGFPAADKGMLLWVPPEMLHGVPGGEAAILSIRIDRAAAATPKFTTTRA
RSQKGMH
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgactcaacagctcacttttggtgaaatgatcagtagtgaccgaagccaaaagcatcta
tctgcgacccaagaaaaaggtggtcagctaccccgtccattggagtggagtggagatatg
gtggagcagaacaagagggcgagggccaatggcgaggtcaagcaggagcagcagcaagag
gaagaagaagaggttgaggaaggagaagtgagccaagaagaaacccaaaggacgggagct
ttccctctggtgaccatggccgccatggagcagacggaggaggagacgcagatcgacgtc
aggatcgccgtcgccttgctccactgccatgcttgcctccaacctctcaagcctcccgtc
ttcaagtgcgatgaggcgcatatcgtgtgctccggctgccgctgcggccaccatgggcag
ctgtgcggtggcgccgccgtgtacagccactgcgccgagctggacgccatcgtcgccact
gccaaggtgccgtgcgcccacgcgccgtacggctgcagcagctacgtcgtgtacgcgggc
gtcgccgaccaccagcgcgcgtgcccgtgcgcgccatgctcctgcccggagcccggctgc
cgcttccgcagctcgccagcggcgctccccggccacctcgccgccggccactcctggccc
gtcgccgagatcgcctacgggaagccgcgcaagctcgccgtgccgccgcccgcccacgtc
ctcgtcggggaggccgaccgcgccgtgttcctcgtgtcgtcgtgcgccgtcggcgcgggc
gccgcggtgtgcgtggtctgcgtcagggcgaacggcggcggcgacaacgcggcggcggtg
gcgcggtacaagtgcaagttgtgggtggaggtgcctagcaacgacgacaacatggccatg
atgacgtcgatggtgaggagcagcgacctcgccggcgggttcccggcggcggacaagggg
atgctgctgtgggtgccgccggagatgctgcacggcgtgcccggcggcgaggcggccatc
ctcagcatccgcattgatagagctgctgctgccacgcccaagttcacgactacacgagcc
aggtcccagaagggaatgcactga

KEGG   Oryza sativa japonica (Japanese rice): 136351892
Entry
136351892         CDS       T01015                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 2
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    136351892
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:osa04121]
    136351892
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     136351892
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    136351892
SSDB
Motif
Pfam: Sina_ZnF PPP4R2 DUF3295
Other DBs
NCBI-GeneID: 136351892
NCBI-ProteinID: XP_066160452
LinkDB
Position
1:join(1379921..1379969,1380967..1381577)
AA seq 219 aa
MADGAGRDRSGLGPGKSATTERALHKITYFNKKSHEQACSYEPCFCPDSGCGFSGSVATL
WKHFTTQHKWPSTEFKYYTPFDLRVKPGAHFLRAGDGQLFVMNMVSVEPVGHGVSLVCIQ
PNTSESSFRCNVVFSSFTGHHQISTLESVRCSSLSDGLPKNYFCIVPKSPGGGAAVLLRI
TIDTKLVLEVEDEQEEEEDDDDYDEDEDEDDESDDEDGN
NT seq 660 nt   +upstreamnt  +downstreamnt
atggccgacggcgcggggcgtgatcgctccggcctcgggccggggaagagcgccacgacg
gagcgggcgctacacaagatcacctacttcaacaagaaaagccatgagcaggcgtgctcc
tacgagccgtgcttctgcccggactctggctgcggcttcagcgggtcagtggcgacgctc
tggaaacatttcaccactcaacacaagtggccgtccacggagttcaagtactatacaccg
ttcgacctcagagtcaaaccaggcgcccacttcctccgagctggcgatggtcagctcttc
gtgatgaacatggtgtcggtggagccagtcggccatggggtctccctcgtctgcatccag
ccgaacacttcggagtccagtttcaggtgcaatgttgtcttctccagcttcacgggccat
caccagatctcgacgctggagtcagtcaggtgctcgtcgctgtcggacgggcttccaaag
aactacttctgcatcgtgcccaagtctcctggtggtggcgctgccgtcttgctcagaatc
accatcgacactaagttggtgctcgaagtcgaggacgaacaggaggaggaggaggacgat
gacgactatgatgaggatgaggatgaggatgacgagagcgacgacgaggatgggaattag

KEGG   Oryza sativa japonica (Japanese rice): 136356525
Entry
136356525         CDS       T01015                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 9
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    136356525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:osa04121]
    136356525
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     136356525
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    136356525
SSDB
Motif
Pfam: Sina_RING Sina_ZnF zf-RING_5 zf-C3HC4_3 NOA36
Other DBs
NCBI-GeneID: 136356525
NCBI-ProteinID: XP_066166638
LinkDB
Position
5:3053884..3055038
AA seq 384 aa
MRLARILPMAASSSSSKRRAMGMAASDQGDTSAHAMKKPRVRVAPDSSASEDDTDEDHGH
DEGDGGEEEEEEEEPDGDGEEESQSYQDPLESDGDGVDEEASAGDMAASEPAAPSTRAAV
AGVTVEDADALECGVCFLLLRPPIFQCEVGHVVCAPCRDTLAPAGRCYVCRVAVAGGEYR
RCYALERLVDAIRVACPHAAHGCAARPAYHDVEAHRLACPHGPCHCPGERCGFVGSTAAL
LDHFAATHNWPCTTNVRAREVFDVRLHDGFNFLVVGGASRHHLVMMNMTREPLGRAITVL
RIHPHATGRIQCELSLSRHVVLGDSWGLYRSHYQKSVFDVGCSDLADGLPDAKQCFQFVV
PRCVAGDDDEGGTGIRINVLITVD
NT seq 1155 nt   +upstreamnt  +downstreamnt
atgaggctcgcgaggattctgcccatggcggcctcctcttccagctcgaagcggcgagcc
atgggcatggcggcgtcggaccaaggtgacacctccgcccacgccatgaagaagcctcgc
gtccgtgtcgcgccggattcctcagcttcggaggatgacaccgacgaggaccatggccat
gacgaaggcgacggcggcgaggaggaggaggaagaagaagaacctgacggtgatggcgag
gaggagagccagagttatcaagatcctttggagtctgatggcgatggtgtggacgaagag
gcaagcgccggcgacatggctgcctccgagccggcggcgccgtcgacacgcgcggcggtg
gcgggcgtgacggtggaggacgccgacgcgctcgagtgcggcgtgtgcttcctcctgctg
aggccgcccatcttccagtgcgaggtgggccacgtcgtgtgcgcgccgtgccgcgacacg
ctggcgccggcgggcaggtgctacgtctgccgcgtcgccgtcgccggcggcgagtaccgg
cgctgctacgcgctggagcgcctggtggacgccatccgcgtcgcgtgcccgcacgccgcc
cacggctgcgccgccaggccggcctaccacgacgtcgaggcgcaccgcctcgcgtgcccg
cacgggccttgccactgccccggcgagcgctgcggcttcgtcggctcgaccgccgcgctc
ctcgaccacttcgccgccacgcacaactggccgtgcaccaccaacgtcagggcccgcgag
gtgttcgacgtccgcctccacgacggcttcaacttcctcgtcgtcggcggcgcctcgcgc
caccacctggtcatgatgaacatgacgcgggagccgctcggccgcgccatcaccgtgctc
cgcatacacccgcacgccacgggcagaatccagtgcgagctctcgctctcgcgccatgtc
gtccttggcgacagctggggcctctatcgcagccactaccagaagtccgtgttcgacgta
ggttgcagcgacctcgccgatggattgccggatgcaaagcagtgcttccagttcgtcgtg
ccaagatgcgtcgccggagacgacgacgaaggtggcaccggcatccgaatcaatgtccta
attaccgtcgactag

KEGG   Oryza sativa japonica (Japanese rice): 136356526
Entry
136356526         CDS       T01015                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    136356526
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:osa04121]
    136356526
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     136356526
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    136356526
SSDB
Motif
Pfam: Sina_RING Sina_ZnF zf-RING_5 zf-C3HC4_3
Other DBs
NCBI-GeneID: 136356526
NCBI-ProteinID: XP_066166639
LinkDB
Position
5:3057262..3058218
AA seq 318 aa
MPPPPPPPPPPPPPPPPRPFSRKPSEPAAPSTRAVVAVTGVTVEDADALECGVCFLPLRP
PIFQCEVGHVVCSPCRDKLAPAGRCHVCRVAVAGGEYRRCYALERLVDAIRVACPHAAHG
CGATPAYHALDAHRRACPHAPCHCPGERCGFVGSTVALQDHIAATHSWPCTTNVRAGETV
SVHLRDGLAFLRVHHHRRRGSATYSDHLIMLNVTREPYGRAVSVLCIRPHAAAEHQVSPP
PPPAMQCELLLVSRFGYDGDGGHCRSHYQKSEFLIGCSDLADGLPDREQSFQFMVPRCVV
GDDDEGGIQIHVRIIVIN
NT seq 957 nt   +upstreamnt  +downstreamnt
atgccgccgccgccgccgccgccaccgccaccgccaccgccaccgccaccacggccgttt
tccaggaagccctctgagccggcggcgccgtcgacacgcgccgttgtcgcggtgacgggc
gtgacggtggaggacgccgacgcgctcgagtgcggcgtgtgcttcctcccgctgaggccg
cccatcttccagtgcgaggtggggcacgtcgtgtgctcgccgtgccgcgacaagctggcg
ccggcgggcaggtgccacgtctgccgcgtcgccgtcgccggcggcgaataccggcgctgc
tacgcgctggaacgcctggtggacgccatccgcgtcgcgtgcccgcacgccgcgcacggc
tgcggcgccacgccggcgtaccacgccctcgacgcgcaccgccgcgcctgcccgcacgcg
ccgtgccactgccccggcgagcgctgcggcttcgtcggctcgaccgtcgcgctccaggac
cacatcgccgccacgcacagctggccgtgcaccaccaacgtccgcgccggcgagacggtg
agcgtccacctccgcgacggcctcgccttcctccgcgtccaccaccaccgccgccgcggc
agcgccacctactccgaccacctcatcatgctgaacgtgacgcgggagccgtacggccgc
gccgtctccgtgctctgcatacgaccccacgccgccgccgagcatcaggtgtcgccgccg
ccgccgccggcgatgcaatgcgaactcctgctcgtctcgcggttcggctacgacggcgac
gggggccattgccgcagccactaccagaagtcggagttcctcataggctgcagcgacctc
gccgacggattgcccgatcgcgagcagagcttccagttcatggtgccaaggtgcgtcgtc
ggagacgacgacgaaggtggcatccaaatccatgtccgtattatcgtcatcaactag

KEGG   Oryza sativa japonica (Japanese rice): 136356527
Entry
136356527         CDS       T01015                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 4
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    136356527
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:osa04121]
    136356527
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     136356527
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    136356527
SSDB
Motif
Pfam: Sina_RING zf-RING_5 Sina_ZnF zf-C3HC4
Other DBs
NCBI-GeneID: 136356527
NCBI-ProteinID: XP_066166640
LinkDB
Position
5:join(3060696..3061103,3061177..3061650)
AA seq 293 aa
MSEEEEDDNGGGEEEESQRETAVVEEEEEESTGVHVGEAEMAASEEQAPPSSSRRAFVTV
ADADALECGVCRLPLRPPVFQCEDGHVVCSPCRDKLAAAAAAAVRCHVCGGGGYRRCHAL
ERLVDAIRVACPHAAHRCGFVGSTAALVDHFAAAHRWPCAWASEAVSVLLRDGLNFLRVV
DLRRPGDASHHRLVMLNVTREALGRAISVLCIHPLAAAAAAKTMQCELELFVPLNGDDGV
DGGQLRRRHYQKSEFPLGCGDLADHKTTFKFVVPRCVVGDDDEGGIRIRVRII
NT seq 882 nt   +upstreamnt  +downstreamnt
atgtcggaggaggaggaagacgacaatggcggcggcgaggaggaagaaagccaacgtgaa
actgctgttgttgaggaggaggaagaggaaagcaccggcgtgcatgtcggggaggcagag
atggctgcctccgaggagcaggcgccgccgtcgtcgtcgagacgagcgttcgtcacggtc
gccgacgccgacgcgctcgagtgcggcgtgtgccgcctcccgctgaggcctcccgtcttc
cagtgcgaggacgggcacgtcgtgtgctcgccgtgccgcgacaagctggcggcggcggcg
gcggcggcggtcaggtgccacgtctgcggcggcggaggctaccggcgctgccacgccttg
gagcgcctggtggacgccatccgcgtcgcgtgcccgcacgccgcccaccgctgcggcttc
gtcggctccaccgccgcgctcgtcgaccacttcgccgccgcgcacagatggccatgcgcc
tgggccagcgaggcggtcagcgtcctcctccgcgacggcctcaacttcctccgcgtcgtc
gatctccgccgccccggcgacgcctcccatcaccgcctggtcatgctgaacgtgacgcgg
gaggcgctcggccgcgccatctccgtgctctgcatacaccccctcgccgccgccgccgcc
gccaagacgatgcaatgtgagctcgagctgttcgtcccgctcaacggcgacgatggcgtc
gacggtggccagctgcgccgccgccactaccagaagtccgagttccccctagggtgcggc
gacctcgccgatcacaagacgaccttcaagttcgtcgtgccaaggtgcgtcgtcggagac
gacgacgagggtggcatccgaatccgtgtgcgtattatttga

KEGG   Oryza sativa japonica (Japanese rice): 4326047
Entry
4326047           CDS       T01015                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    4326047
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:osa04121]
    4326047
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     4326047
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    4326047
SSDB
Motif
Pfam: Sina_ZnF Sina_RING DUF4729
Other DBs
NCBI-GeneID: 4326047
NCBI-ProteinID: XP_015640884
LinkDB
Position
1:join(1257313..1257573,1257732..1258469)
AA seq 332 aa
MAEQNKRSSSAAENGHAGGKKARANVEVKQEEEEAEEGEMSQEEESAKTGPLVVATAMDD
PQIDVRIAVGLLHCHACLLPLKPPVFKCEAAHVVCSGCRGNHGQLCRRAAAYAHCAELDA
IVGAAKVACAHAPYGCDSYVVYGAAAEHQRACPCAPCSCPDPGCGFRGSPAALLGHFATD
HPWSVTQISYAKPCRLAVPLPRRCHVLVGEDDRAMFLVVSPSPCGVGVGAAVCVACVRAN
GDDAAAAQYKCKLWVEVPTNSDNMVMMTSKVRSSDLSGGFPAAEQGMFLVVPPELLHEVS
GETPILSIRIDRAAPAIAKPTTPRARSLRRLQ
NT seq 999 nt   +upstreamnt  +downstreamnt
atggctgagcagaacaagaggagctcgtcggcggcggagaacggccacgccggcggcaag
aaggcgagggccaacgtcgaggtgaagcaggaggaagaggaggcggaggaaggagagatg
agccaagaagaagagagcgcaaagacggggcctctggtggtggccaccgccatggacgac
ccgcagatcgacgtcaggatcgccgtcggcttgctccactgccatgcctgcctcctcccc
ctcaagcctcccgtcttcaagtgcgaggcggcgcacgtggtgtgctccggctgccgcggc
aaccacggccagctctgccgccgcgccgccgcgtacgcccactgcgccgagctggacgcc
atcgtcggcgccgccaaggtggcgtgcgcccacgcgccgtacggctgcgacagctacgtc
gtgtacggcgcggccgccgagcaccagcgcgcgtgcccgtgcgcgccctgctcctgcccg
gaccccggctgcggcttccgcggctcgccggcggcgctcctcggccacttcgccaccgac
cacccctggtccgtcacgcagatcagctacgcgaagccgtgcaggctcgccgtgccgctg
ccccggcggtgccacgtcctcgtcggggaggacgaccgcgccatgttcctggtggtgtcc
ccgtccccgtgcggcgtcggcgtcggcgcggcggtgtgcgtggcgtgcgtccgggcgaac
ggcgacgacgcggcggcggcgcagtacaagtgcaagctgtgggtggaggtgccgaccaac
agcgacaacatggtgatgatgacgtccaaggtgaggagcagcgacctctccggcgggttc
ccggcggcggagcaggggatgttcttggtggtgccgccggagctgcttcacgaggtgtcc
ggcgagacgccgatcctcagcatccgcatcgatcgagctgctcccgccattgccaagccc
accactccacgagccaggtccctgaggagattgcagtga

KEGG   Oryza sativa japonica (Japanese rice): 4327774
Entry
4327774           CDS       T01015                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    4327774
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:osa04121]
    4327774
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     4327774
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    4327774
SSDB
Motif
Pfam: Sina_TRAF Sina_ZnF Sina_RING zf-C3HC4_2
Other DBs
NCBI-GeneID: 4327774
NCBI-ProteinID: XP_015633666
UniProt: A0A9K3Y6T7 Q5NAX7
LinkDB
Position
1:complement(join(7462232..7462591,7462725..7463111,7464043..7464339))
AA seq 347 aa
MDVDSVECLSLPDSSSSSGAGAGGGGGGGGGGGVGAMDAADDVGLALHAHGALLAAAAAA
RAAACSKGGGGGGAAAGSGVHELLECPVCTNSMYPPIHQCQNGHTLCSTCKARVHNRCPT
CRQELGDIRCLALEKVAESLELPCKYCSLGCPEIFPYYSKIKHEAQCMFRPYNCPYAGSE
CAVVGDIPYLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLH
FEAFQLGMAPVYMAFLRFMGDENEARNYSYSLEVGANGRKMVWEGTPRSVRDSHRKVRDS
HDGLIIQRNMALFFSGGDRKELKLRITGRIWKEQQTPDGACIPNLCS
NT seq 1044 nt   +upstreamnt  +downstreamnt
atggacgtggacagcgtcgagtgcctgtcgctgccggactcctcctcctcctccggcgcc
ggcgccggcggcggagggggtgggggtgggggtgggggcgtaggcgccatggatgcggcg
gacgacgtcggcctcgcgctgcacgcgcacggcgcgctcctggcggccgcggcggccgcg
cgggcggcggcgtgctccaagggagggggagggggaggcgcggcggccgggagcggcgtg
cacgagctgctcgagtgccccgtctgcaccaactccatgtacccgccgatccaccagtgc
caaaatggacacactctgtgttccacctgcaaagctagggtgcacaaccgttgccctaca
tgcagacaagagcttggtgatatcaggtgtttggccctggagaaagtagctgaatcgctt
gagcttccctgtaagtactgctctttggggtgcccagagatcttcccatactacagcaag
ataaaacatgaagcgcagtgcatgtttagaccatacaattgcccttatgctggttctgag
tgtgctgtggtgggtgatatcccttatcttgttgcccatttgagggatgatcacaaagtt
gatatgcatagtggttgcacattcaaccatagatatgtcaagtccaacccacgagaagtc
gaaaatgccacctggatgctgacggtcttccactgtttcgggcaatacttctgcctgcac
tttgaggccttccagcttgggatggcaccagtctatatggcctttctccgtttcatgggt
gatgaaaatgaggcaaggaactatagctacagccttgaggtcggcgcaaacggcaggaaa
atggtatgggagggcaccccccgaagtgtccgggacagccaccggaaggtgcgggacagc
catgatggcctcatcatccagaggaacatggcgctgttcttctcggggggcgaccgaaag
gagctgaagctgaggatcaccggccggatctggaaggagcagcagaccccagacggtgcc
tgcataccaaatctctgtagctaa

KEGG   Oryza sativa japonica (Japanese rice): 4328179
Entry
4328179           CDS       T01015                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    4328179
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:osa04121]
    4328179
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     4328179
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    4328179
SSDB
Motif
Pfam: Sina_TRAF Sina_ZnF Sina_RING zf-C3HC4_3 zf-C3HC4_2 zf-RING_UBOX zf-RING_6 zinc-ribbons_6 zf-RING_4 YEATS
Other DBs
NCBI-GeneID: 4328179
NCBI-ProteinID: XP_015623254
UniProt: A3A2R2 Q6Z6Z3
LinkDB
Position
2:complement(join(1488540..1488860,1489112..1489498,1490499..1490717))
AA seq 308 aa
MAPGSSIVTDIPESDCVSDGLSEALTGIRLDGDSTCKPWSTSLVTVELSSLTGLNDLLEC
PVCTNSMRPPILQCPNGHTICSNCKHRVENHCPTCRQELGNIRCLALEKVAESLQLPCKY
QSLGCAEIHPYQNKLKHEELCRFRPYSCPYAGSECLIAGDVPMLVSHLINDHKVDLHEGC
TFNHRYVKSNPYEVENATWMLTVFKCFGQHFCLHFEAFLLGMAPVYMAFLRFMGEDSEAR
NFCYSLEVGGNGRKLTWQGIPRSIRDSHKKVRDSFDGLIIHRNMALFFSGGNRQELKLRV
TGRIWKEQ
NT seq 927 nt   +upstreamnt  +downstreamnt
atggccccaggaagcagcattgtgaccgatatccctgagtcggattgtgtatctgatggg
ctctctgaggcactcactggcattaggcttgatggagattctacatgcaagccctggtct
acatcacttgtcacagttgagctatcatcgctgacgggcttgaatgatttgctcgagtgt
ccagtctgcacaaactcaatgcgcccacctatactgcagtgcccaaatggtcacacaata
tgctctaactgcaagcatagggtggagaatcattgccctacttgtcgccaagaactgggt
aatatcagatgtttggctcttgagaaggtggctgagtcacttcagcttccatgcaaatat
caaagcctaggctgtgctgagattcatccttaccaaaacaaacttaagcatgaggagctc
tgcaggttcaggccatatagttgtccatatgcaggttcagaatgcctgattgctggcgat
gttccgatgcttgtctctcatctcataaacgaccataaggtggacttgcatgaaggctgc
acctttaaccaccgttatgtgaagtccaacccttatgaagtggaaaacgctacatggatg
ctgacggttttcaagtgttttggacagcacttctgcctgcattttgaggcattcctgctg
gggatggcaccagtgtacatggcgttcctgaggttcatgggcgaggacagcgaggcccgg
aacttctgctacagcctggaggtgggcgggaacgggcggaagctgacatggcagggcatc
ccccggagcatcagggacagccacaagaaggtccgggacagcttcgacggcctcatcatc
caccggaacatggccctcttcttctccggcggcaacaggcaggagctcaagctgcgggtt
accggccgcatctggaaggagcaatga

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