Oryza sativa japonica (Japanese rice): 107277419
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Entry
107277419 CDS
T01015
Name
(RefSeq) large ribosomal subunit protein uL16
KO
K02866
large subunit ribosomal protein L10e
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
107277419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
107277419
Ribosome [BR:
osa03011
]
Ribosomal proteins
Eukaryotes
Large subunit
107277419
Archaea
107277419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L16
Motif
Other DBs
NCBI-GeneID:
107277419
NCBI-ProteinID:
XP_015629987
UniProt:
Q10LW7
LinkDB
All DBs
Position
3:complement(join(12324620..12324703,12325280..12325361,12325458..12325959,12326111..12326120))
Genome browser
AA seq
225 aa
AA seq
DB search
MGRRPVRCYRQIKNKPYPKSRYCRGVPDPKIRIFDVGQKKRSADDFPLCVHLVSWEKENV
SSEALEAARIACNKYMAKHAGKDAFHLRVCAHPYHVLRINKMLSCAGADRLQTGMRGAFG
KPTGTCARVRIGQVLLSVRCRDANAAHAQEALRRAKFKFPGRQRVIFSAKWGFTRFKRDE
YLKLKSEGRIVPDGVNAKLLTRHGSVADRQPGRGVFPPSVAGSDA
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaggccagtgcggtgctaccgtcagatcaagaacaagccgtacccgaagtcg
cgctactgccgcggcgtgcccgacccgaagatccgcatcttcgacgtcgggcagaagaag
cggagcgcggacgacttcccgctgtgcgtgcacctggtgagctgggagaaggagaacgtg
tcgagcgaggccctggaggcggcccggatcgcgtgcaacaagtacatggccaagcacgcg
ggcaaggacgcgttccacctccgggtgtgcgcccacccgtaccacgtcctccgcatcaac
aagatgctgtcctgcgcgggcgccgaccggctgcagaccgggatgcgcggcgcgttcggg
aagcccacggggacgtgcgcccgcgtccgcatcgggcaggtgctcctctccgtgcgatgc
cgcgacgcgaacgccgcgcacgcgcaggaggccctgcgccgcgccaagttcaagttcccc
ggccgccagagggtcatcttcagcgccaagtggggattcaccaggttcaagcgcgacgag
tacctcaagcttaagagcgagggacgcatcgtgcccgatggcgtcaacgccaagttgcta
actcggcacggatcggttgctgatcgccagcccgggagaggggtcttcccaccctccgtt
gcaggctcagacgcatga
Oryza sativa japonica (Japanese rice): 4337928
Help
Entry
4337928 CDS
T01015
Symbol
QM1, SG12
Name
(RefSeq) large ribosomal subunit protein uL16y
KO
K02866
large subunit ribosomal protein L10e
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4337928 (QM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4337928 (QM1)
Ribosome [BR:
osa03011
]
Ribosomal proteins
Eukaryotes
Large subunit
4337928 (QM1)
Archaea
4337928 (QM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L16
Motif
Other DBs
NCBI-GeneID:
4337928
NCBI-ProteinID:
NP_001389429
LinkDB
All DBs
Position
5:join(4161060..4161069,4161766..4162267,4162372..4162453,4162630..4162695)
Genome browser
AA seq
219 aa
AA seq
DB search
MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENV
TSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
KPQGTCARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFSRDE
YVRLKSEGRIMPDGVNAKLLGCHGRLSARAPGKAFLSAA
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggggaggagacctgcaaggtgctatcgccagatcaagaacaagccgtaccccaagtca
aggtactgccgtggtgtccctgaccccaagatcaggatctacgatgtcgggatgaagaag
aagggtgtggatgagttctcccactgtgtgcatctcgtctcttgggagaaggagaatgtc
accagtgaggctcttgaggctgcgcgtatcgcgtgcaacaagtacatgaccaagtctgca
ggaaaggatgccttccacctcagggttcgggttcacccgttccatgtgctccgtatcaac
aagatgctttcgtgtgccggggcagataggctccagactggaatgaggggtgcttttggg
aagccacagggaacctgtgctagggtggatattggccaggtcctcctttctgtgcggtgc
aagcccaacaatgctgtccatgccagcgaagccctccgtcgtgccaagttcaagttccct
ggtcgccaaaagatcattgagagtagaaagtggggtttcaccaagttcagccgcgatgaa
tacgtcaggcttaagagcgagggtagaatcatgcctgatggtgtcaatgctaagctactt
ggttgccatggtcgcctctctgctcgtgcccccgggaaggccttcctctcagccgcttag
Oryza sativa japonica (Japanese rice): 4350098
Help
Entry
4350098 CDS
T01015
Symbol
SC34
Name
(RefSeq) large ribosomal subunit protein uL16z
KO
K02866
large subunit ribosomal protein L10e
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4350098 (SC34)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4350098 (SC34)
Ribosome [BR:
osa03011
]
Ribosomal proteins
Eukaryotes
Large subunit
4350098 (SC34)
Archaea
4350098 (SC34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L16
Motif
Other DBs
NCBI-GeneID:
4350098
NCBI-ProteinID:
NP_001391387
LinkDB
All DBs
Position
11:join(6371692..6371701,6372997..6373498,6373590..6373671,6373916..6373996)
Genome browser
AA seq
224 aa
AA seq
DB search
MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV
SSEALEAARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
KPQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREE
YVKLKAEGRIMSDGVNAQLLGSHGRLAKRAPGKAFLAETIQASA
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggggagaaggcctgctaggtgctaccgccagatcaagaacaagccgtaccccaagtca
aggtactgccgtggtgtccctgaccccaagatcaggatctatgatgttggcatgaagaag
aagggcgtggatgagttcccctactgtgtgcacttggtgagttgggagaaggagaatgtc
tccagtgaagctcttgaggctgcccgcattgcttgcaacaagtacatgaccaagaatgca
ggaaaggatgccttccacctaagggtcagggtccacccgttccatgtccttcgtatcaac
aagatgctctcgtgtgctggggctgataggctccaaactggaatgaggggtgcttttggg
aagcctcagggtacctgtgctcgcgtggacattggtcaggttcttctttctgttcgttgc
aaggagagcaatgctaaacatgctgaagaggcactccgccgtgccaagttcaagttccct
ggccggcaaaagatcatccacagcaggaagtggggcttcaccaagttcacccgtgaggag
tacgtcaagttgaaggctgagggcagaattatgtctgatggtgtcaatgctcagctgctt
ggttctcatggtcgtcttgcgaagcgtgcccctgggaaggcgtttctggctgagaccatt
caagcttccgcctag
DBGET
integrated database retrieval system