Oryza sativa japonica (Japanese rice): 107277483
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Entry
107277483 CDS
T01015
Name
(RefSeq) transcription factor TCP21
KO
K16221
transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
107277483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
107277483
Transcription factors [BR:
osa03000
]
Eukaryotic type
Other transcription factors
TCP
107277483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TCP
Motif
Other DBs
NCBI-GeneID:
107277483
NCBI-ProteinID:
XP_015629543
LinkDB
All DBs
Position
3:join(18054133..18054424,18054477..18054662,18056416..18056441)
Genome browser
AA seq
167 aa
AA seq
DB search
MPCHIHGGAALDKQLVPTASKANGTTLAVRKPPSKDRHSKVDGRGRRVRMPIICAARVFQ
LTRKLGLKSDGQTIEWLLREAEPSIIGATGTGTTLASYHTTSPSPTLASDAPVEGFWVLS
AGADFGQFWSFAAVREMMAATAAPAMLGEAFAASVGNYLYLTVSSNK
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgccttgtcatatccatggcggcgccgctctggacaagcaactcgtccccaccgcctcc
aaagccaatggcaccaccctcgctgtccgcaagcctccctccaaggaccgccatagcaag
gtcgacggccgcggccgccgcgtccgcatgcccatcatctgcgctgcccgtgttttccag
ctcacccgcaagcttggcctaaagtccgacggccagactatcgagtggctcctccgcgag
gctgagccatccatcattggcgccactggcaccggcaccaccctagcctcctaccacacc
acctccccctcgcccactcttgcttctgacgcccccgtcgagggcttctgggtgctctcc
gcaggggctgacttcggccaattctggagctttgcggccgtgcgggagatgatggccgcc
accgcggcgcccgccatgcttggggaggccttcgccgccagtgttggcaactacctctat
ttgactgtttcttccaataagtga
Oryza sativa japonica (Japanese rice): 4330080
Help
Entry
4330080 CDS
T01015
Name
(RefSeq) transcription factor TCP7
KO
K16221
transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
4330080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4330080
Transcription factors [BR:
osa03000
]
Eukaryotic type
Other transcription factors
TCP
4330080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TCP
Motif
Other DBs
NCBI-GeneID:
4330080
NCBI-ProteinID:
XP_015624938
UniProt:
Q6H878
A0A0P0VM35
LinkDB
All DBs
Position
2:25983753..25984388
Genome browser
AA seq
211 aa
AA seq
DB search
MSSRDAAATFHVYQPVQIPTATVAPAAAVSAAPAEAVAQLVPAPSKKAAGAAGGKDRHSK
VNGRGRRVRMPIVCAARVFQLTRELGLKSDGQTIEWLLRQAEPSILAATGTGTTPAAFVS
SSAPSTSSSHQHTLLGKRQRQESAAADAVSVAGAASAFWAALPAPGRPDAWGFSPLDAQP
TYVPMAQAHHHHLNLLAALSGAARRAEEESR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccgcgacgccgccgccacgttccatgtctaccagcccgtgcagatcccgacg
gccacggtggcgcccgctgcggcagtgtcggcggcgccggcagaggccgtcgcccagctg
gtcccggcgccgagcaagaaggcggccggcgcggcgggtgggaaggaccggcacagcaag
gtgaacgggcgcgggcggcgcgtgcggatgccgatcgtgtgcgcggcgcgggtgttccag
ctcacgcgggagctggggctcaagtccgacggccagaccatcgagtggctgctccgccag
gccgagccgtccatcctcgccgccacggggaccggcaccaccccggccgccttcgtctcc
tcctccgcgccgtccacctcctcctcgcaccagcacaccctcctcggcaagcgccagcgc
caggagtccgccgccgccgacgccgtctccgtcgccggcgccgcgtccgcgttctgggcg
gcgctgcccgcaccaggccggcccgacgcctggggcttctccccgctggacgcgcagccg
acgtacgtgccgatggcgcaggcgcaccaccaccacctcaacctcctcgccgcgctctcc
ggcgccgccaggcgcgccgaggaggagtcccggtga
Oryza sativa japonica (Japanese rice): 9272106
Help
Entry
9272106 CDS
T01015
Name
(RefSeq) transcription factor TCP7
KO
K16221
transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
9272106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
9272106
Transcription factors [BR:
osa03000
]
Eukaryotic type
Other transcription factors
TCP
9272106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TCP
Motif
Other DBs
NCBI-GeneID:
9272106
NCBI-ProteinID:
XP_015627477
UniProt:
A0A0P0VRQ5
Q6K7P2
LinkDB
All DBs
Position
2:complement(36108639..36109349)
Genome browser
AA seq
236 aa
AA seq
DB search
MTTRPDGGGGGGGAPDKQLVPASNANGTALAVRKPPSKDRHSKVDGRGRRIRMPIICAAR
VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTSSPSSLRSNSTSNSNDL
LLPRAAPFILGKRLRAADDHTTSPAPAPDATAPTQAFWALPARADFGQLWSFAAAPEMMV
AAAAAPAMPGEASAARVGNYLPMAQGNLNLLASFSGGPGGAGATAATGRPEEESAR
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaggccagacggcggcggtggcggtggcggcgctccggacaagcagctcgtc
ccggcctccaacgccaatggcaccgccctcgccgttcgcaagcctccctccaaggaccgc
cacagcaaggtcgacggccgcggccgccgcatccgcatgcccatcatctgcgccgcccgc
gtcttccagctcacccgcgagctcggccacaagtccgacggccagaccatcgagtggctc
ctccgccaggccgagccctccatcatcgccgccaccggcaccggcaccaccccggcctcc
ttctccacctcctccccttcctccctccgctccaactccacctccaactccaacgacctc
ctcctcccccgcgccgcccccttcatcctcggcaagcgcctccgtgccgccgacgaccac
accacttcgcccgcgcccgctcccgacgccaccgcccccacccaggccttctgggcgctc
ccggccagggctgacttcggccagctctggagcttcgccgccgcgccggagatgatggtc
gccgccgccgccgcacccgccatgcctggggaggcgtccgccgccagggtcggcaactac
ctccccatggcgcagggcaacctcaaccttctcgcctccttctccggcggcccaggaggc
gccggggccacggcggcgaccggccgacccgaggaggagagcgcccgctga
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integrated database retrieval system