KEGG   Oryza sativa japonica (Japanese rice): 107277614
Entry
107277614         CDS       T01015                                 
Name
(RefSeq) ubiquitin-ribosomal protein eS31 fusion protein
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03010  Ribosome
osa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    107277614
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107277614
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:osa03011]
    107277614
   04121 Ubiquitin system [BR:osa04121]
    107277614
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    107277614
Ribosome [BR:osa03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    107277614
  Archaea
    107277614
Ubiquitin system [BR:osa04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   107277614
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107277614
  Exosomal proteins of colorectal cancer cells
   107277614
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ribosomal_S27 Ubiquitin_2
Other DBs
NCBI-GeneID: 107277614
NCBI-ProteinID: XP_015614163
UniProt: Q9FWV0 A0A8J8YEW6
LinkDB
Position
10:complement(19354181..19354624)
AA seq 147 aa
MSTVMTQIFVKGLTGKTTALRMEPSDTVESVKVKLVDKEGLPPDQQPLIFQGHQLDDGHT
LIYYGIQEESTLHLLGRICGGGGGNKKRKKKAYATPKKGKHEHRKEELAVLRHYRVDDVM
GKVERLRLMCPNPECKDVGALMAKHHD
NT seq 444 nt   +upstreamnt  +downstreamnt
atgtcgacggtgatgacgcagatatttgtgaaagggctgacagggaagacgacggctctg
aggatggagccgtcggatacggtggagagcgtgaaggtgaagctcgtggacaaggagggg
cttccgccagaccagcagccgctcatcttccaggggcatcagctggacgacggccacacg
ctaatctactatggtattcaggaggagtcgacgctgcacctcctcggtcgcatctgtggt
ggcggcggcggcaacaagaagcgaaagaagaaggcgtacgcgacacctaagaagggaaag
catgagcaccgcaaggaagagcttgcggtgctccgtcactatcgtgtcgatgacgtgatg
gggaaggtggagaggctacgactgatgtgtcctaacccagagtgcaaagacgttggcgca
cttatggcgaagcaccacgactga

KEGG   Oryza sativa japonica (Japanese rice): 4326977
Entry
4326977           CDS       T01015                                 
Symbol
OsJ_01558, RPS27AA
Name
(RefSeq) ubiquitin-ribosomal protein eS31z fusion protein
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03010  Ribosome
osa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    4326977 (OsJ_01558)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    4326977 (OsJ_01558)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:osa03011]
    4326977 (OsJ_01558)
   04121 Ubiquitin system [BR:osa04121]
    4326977 (OsJ_01558)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    4326977 (OsJ_01558)
Ribosome [BR:osa03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    4326977 (OsJ_01558)
  Archaea
    4326977 (OsJ_01558)
Ubiquitin system [BR:osa04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   4326977 (OsJ_01558)
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   4326977 (OsJ_01558)
  Exosomal proteins of colorectal cancer cells
   4326977 (OsJ_01558)
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N Plexin_RBD TBK1_ULD DUF2604 Ubiquitin_5 Ogr_Delta OTU1_UBXL
Other DBs
NCBI-GeneID: 4326977
NCBI-ProteinID: NP_001395951
LinkDB
Position
1:complement(12689353..12689820)
AA seq 155 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKQKHKHKKVKLAVLQFYKVDDATGKVTRLRK
ECPNAECGAGTFMANHFDRHYCGKCGLTYVYNQQA
NT seq 468 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctgacggggaagacgatcacgctggaggtggagtcctcg
gacaccatcgacaacgtgaaggcgaagatccaggacaaggaggggatcccgcccgaccag
cagcggctcatcttcgccggcaagcagctggaggacgggcgcaccctcgccgactacaac
atccagaaggagtcgaccctccacctggtgctccgcctccgcggcggcgccaagaagcgc
aagaagaagacgtacaccaagcccaagaagcagaagcacaagcacaagaaggtgaagctc
gccgtgctccagttctacaaggtggacgacgccaccggcaaggtcacccgcctccgcaag
gagtgccccaacgccgagtgcggcgccggcaccttcatggccaaccacttcgaccgccac
tactgcggtaagtgcggcctcacctacgtctacaaccagcaggcttag

KEGG   Oryza sativa japonica (Japanese rice): 4337883
Entry
4337883           CDS       T01015                                 
Symbol
OsJ_17209, RPS27AB, UBQ6
Name
(RefSeq) ubiquitin-ribosomal protein eS31y fusion protein
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03010  Ribosome
osa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    4337883 (OsJ_17209)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    4337883 (OsJ_17209)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:osa03011]
    4337883 (OsJ_17209)
   04121 Ubiquitin system [BR:osa04121]
    4337883 (OsJ_17209)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    4337883 (OsJ_17209)
Ribosome [BR:osa03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    4337883 (OsJ_17209)
  Archaea
    4337883 (OsJ_17209)
Ubiquitin system [BR:osa04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   4337883 (OsJ_17209)
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   4337883 (OsJ_17209)
  Exosomal proteins of colorectal cancer cells
   4337883 (OsJ_17209)
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N Plexin_RBD TBK1_ULD DUF2604 Ubiquitin_5 IBR Fer2_3 OTU1_UBXL
Other DBs
NCBI-GeneID: 4337883
NCBI-ProteinID: NP_001407020
LinkDB
Position
5:3554151..3554618
AA seq 155 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDATGKVTRLRK
ECPNNDCGAGTFMANHFDRHYCGKCGLTYVYNQKA
NT seq 468 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctgacggggaagaccatcacgctggaggtggagtcctcg
gacaccatcgacaacgtgaaggccaagatccaggacaaggaagggatccccccggaccag
cagcgcctcatcttcgccggcaagcagctcgaggatggccgcaccctcgccgactacaac
atccagaaggagtccaccctccacctcgtgctccgcctccgcggcggcgccaagaagcgc
aagaagaagacgtacaccaagcccaagaagatcaagcacaagcacaagaaggtgaagctc
gccgtgctccagttctacaaggtggacgacgccaccggcaaggtcaccaggctcaggaag
gagtgccccaacaacgactgcggcgcgggcaccttcatggccaaccacttcgatcgccac
tactgcggcaagtgcggcctcacctacgtctacaaccagaaggcctag

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