KEGG   Oryza sativa japonica (Japanese rice): 112935996
Entry
112935996         CDS       T01015                                 
Name
(RefSeq) 4-coumarate--CoA ligase-like 5
  KO
K01904  4-coumarate--CoA ligase [EC:6.2.1.12]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00130  Ubiquinone and other terpenoid-quinone biosynthesis
osa00940  Phenylpropanoid biosynthesis
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
Module
osa_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
osa_M00137  Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00130 Ubiquinone and other terpenoid-quinone biosynthesis
    112935996
  09110 Biosynthesis of other secondary metabolites
   00940 Phenylpropanoid biosynthesis
    112935996
Enzymes [BR:osa01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.12  4-coumarate---CoA ligase
     112935996
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-GeneID: 112935996
NCBI-ProteinID: XP_025878198
LinkDB
Position
1:join(39886007..39887065,39887209..39887398,39888383..39888528,39888643..39888710,39888800..39888902,39889361..39889486)
AA seq 563 aa
MADRAPPPPPPPAGIDSRSGFCAATRIFHSTRAPGDLPPESLPMTAAAYAFSLLSSSTLP
GRPALVDAATGIAISYPSFLAAVRSLAGGLWCSLGLRPGDVALVVAPSRLEVPVLDFALM
SIGAVVSPANPVSTPEEYAHQVALSRPVVAFAAPEVAAKLPEHVRCVVIGSDEYGRLAAS
DGRRAAAPAAVAVKQSDTAAVLYSSGTTGRVKAVAITHRNLIALMSLHADNREKVAREAA
EAGEEPPPPAVTLLPIPLFHVFGFMMVLRSVSMGETSVLMERFDFIAALRAIERYRVTLL
PAAPPVLVAMVKYEEARRRDLSSLLVIGIGGAPLGREVAEQFASVFPNVELVQGYGLTES
SGAVAATVGPEESKAYGSVGKLGSHLQAKIVDPSTGEALGPGQRGELWVRGPIVMKGYVG
DDEATAATVDSEGWLKTGDLCYFNEDGFLYIVDRLKELIKYKGYQVPPAELEHILQSHPG
IADAAVIPYPDEEAGELPMAFIVRQPGSNITKEQVMDYVAKQVAPYKKVRRVAFVTAIPK
SPAGKILRRELVQQALSMGASKL
NT seq 1692 nt   +upstreamnt  +downstreamnt
atggccgaccgcgcgccgcctccgcctccgccgcccgccgggatcgactccaggagcggc
ttctgcgcggcgacgcggatcttccacagcacccgcgccccgggcgacctcccgccggag
tcgctcccgatgaccgcggcggcctacgccttctccctcctgtcgtcgtcgacgctcccc
ggccgccccgcgctcgtcgacgccgccactggcattgccatctcctacccgtccttcctc
gccgccgtccgctccctcgcgggggggctctggtgctccctcggcctccgccccggggac
gtcgcgctggttgtcgcgccctcgaggttggaggtccccgtgctcgacttcgcgctcatg
tccatcggcgccgtcgtgtcgccggcgaacccggtgtccacgcccgaggagtacgcgcac
caggtcgcgctgtccaggccggtcgtcgcgttcgcggcgcccgaggtggccgccaagctg
cccgagcatgtgaggtgcgtcgttatcgggtcggatgagtacgggaggctggcggcgtcc
gacggccgccgcgcggcggctccggcggcggtggcggtgaagcaatcggacacggcggcg
gtgctctactcgtcgggcaccacagggcgggtcaaggccgtcgcgatcacgcaccgcaac
ctcatcgcgctcatgtcgctgcacgccgacaaccgggagaaggtcgcgagggaggccgcc
gaggccggcgaggagccgccgccgccggcggtgacgctgctccccatccccctgttccac
gtgttcgggttcatgatggtgctccgctccgtctccatgggggagacctccgtgctcatg
gagcggttcgacttcatcgccgcgctgcgcgccatcgagcgctaccgcgtgacgctgctg
cccgcggcgccgcccgtgctcgtcgccatggtcaagtacgaggaggcgcgccgccgcgac
ctctcctccctgctggtcatcggcatcggcggcgctcccctaggccgcgaggtcgccgag
caattcgcttccgtcttccccaacgtggagcttgttcagggctacggtttaaccgaatcg
tctggcgcggtggctgccacagtcgggccagaggaatcgaaggcatacggatcggtcggg
aagctggggtcgcatttgcaggctaagattgtagatccctccaccggtgaggccctcgga
ccagggcagcgcggcgagctttgggtcagaggcccaatcgtcatgaaaggttacgtgggt
gatgatgaggcgaccgcagcaacggttgactcagaaggctggttgaaaacaggtgacctc
tgctacttcaatgaagatggttttctatacatcgttgatcgactgaaggagttgataaag
tacaagggataccaggtacctccagcagaactggagcatattctgcagtcccatcctgga
atcgctgatgcggcagttatcccatatccagatgaagaagctggggaactaccaatggct
ttcatagtaaggcaaccaggttcaaatattaccaaggaacaagtcatggattatgtcgca
aaacaggttgcgccatacaagaaggtgcgacgagtggcttttgtcactgcaataccaaaa
tcgcctgcagggaagatccttcggcgggagcttgtgcagcaggccctgtcgatgggtgcc
tccaagctttga

KEGG   Oryza sativa japonica (Japanese rice): 4328485
Entry
4328485           CDS       T01015                                 
Symbol
4CL-3, 4CL3, Os4CL3
Name
(RefSeq) 4-coumarate--CoA ligase 3
  KO
K01904  4-coumarate--CoA ligase [EC:6.2.1.12]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00130  Ubiquinone and other terpenoid-quinone biosynthesis
osa00940  Phenylpropanoid biosynthesis
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
Module
osa_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
osa_M00137  Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00130 Ubiquinone and other terpenoid-quinone biosynthesis
    4328485 (4CL-3)
  09110 Biosynthesis of other secondary metabolites
   00940 Phenylpropanoid biosynthesis
    4328485 (4CL-3)
Enzymes [BR:osa01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.12  4-coumarate---CoA ligase
     4328485 (4CL-3)
SSDB
Motif
Pfam: AMP-binding AMP-binding_C TusA
Other DBs
NCBI-GeneID: 4328485
NCBI-ProteinID: NP_001396278
LinkDB
Position
2:join(4289933..4290568,4291092..4291445,4291557..4291755,4294334..4294547,4294642..4294744,4294824..4294982)
AA seq 554 aa
MGSVAAEEVVVFRSKLPDIEIDNSMTLQEYCFARMAEVGARPCLIDGQTGESYTYAEVES
ASRRAAAGLRRMGVGKGDVVMSLLRNCPEFAFSFLGAARLGAATTTANPFYTPHEVHRQA
EAAGARVIVTEACAVEKVREFAAERGVPVVTVDGAFDGCVEFREVLAAEELDADADVHPD
DVVALPYSSGTTGLPKGVMLTHRSLITSVAQQVDGENPNLYFSKDDVILCLLPLFHIYSL
NSVLLAGLRAGSTIVIMRKFDLGALVDLVRKHNITIAPFVPPIVVEIAKSPRVTAEDLAS
IRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPFKVKSGSCG
TVVRNAELKIVDPDTGTSLGRNQSGEICIRGEQIMKGYLNDPEATKNTIDEDGWLHTGDI
GFVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEVPVA
FIVRTEGSEITEDEIKKFVAKEVVFYKRINKVFFTDSIPKNPSGKILRKDLRARLAAGIP
DAVAAAAADAPKSS
NT seq 1665 nt   +upstreamnt  +downstreamnt
atggggtcggtggcggcggaggaggtggtggtgttccggtcgaagctgccggacatcgag
atcgacaacagcatgacgctgcaggagtactgcttcgcgaggatggcggaggtcggggcg
cggccgtgcctgatcgacgggcagaccggggagtcgtacacgtacgcggaggtggagtcc
gcgtcgcggcgcgccgcggcggggctccggcggatgggggtgggcaagggcgacgtggtg
atgagcctcctccgcaactgccccgagttcgccttctccttcctcggcgcggccaggctg
ggcgccgccaccacgacggcgaacccgttctacacgccgcacgaggtccaccgccaggcg
gaggccgcgggcgccagggtgatcgtcaccgaggcgtgcgccgtcgagaaggtgcgggag
ttcgccgcggagaggggcgtccccgtggtcaccgtggacggcgcgttcgacggctgcgtg
gagttccgcgaggtgctcgccgcggaggagctcgacgccgacgccgacgtccaccccgac
gacgtcgtcgccctcccctactcctccggcaccaccggcctccccaagggcgtcatgctc
acccaccgcagcctcatcaccagcgtcgcccagcaggtggatggagagaaccctaacctg
tacttcagcaaggatgatgttatactatgcctgctgccactgttccacatctactcgctc
aactccgtgctgctggctggcctgcgtgccgggtcgaccatcgtgatcatgcggaagttt
gatcttggcgcgctcgtcgaccttgtgcgcaagcacaacatcaccatcgcccccttcgtg
ccccccatcgtggtggagatcgccaagagcccccgcgtcaccgcggaggacctcgcctcc
atccgcatggtcatgtccggtgccgcgcccatggggaaggaccttcaggatgcattcatg
gccaagatccccaatgccgtcctcggacagggttacggtatgactgaggctgggccagtg
ctggcaatgtgcctggcgtttgccaaggagcccttcaaggttaagtccgggtcgtgcggt
acagtggtgcgcaacgcggagctgaagatcgtcgaccccgacaccggcacctccctcggc
cggaaccagtccggcgagatctgcatccgcggagaacagatcatgaaaggctatctgaat
gatcctgaggcgaccaagaacaccatcgacgaggacgggtggctgcacaccggagacatc
ggcttcgtcgacgacgacgacgagatcttcatcgtggacaggctcaaggagatcatcaag
tacaaggggttccaggtgccaccggccgagctggaggcgctgctcatcactcacccggag
atcaaggacgccgccgtcgtctcgatgaaggatgatcttgccggtgaagtgccagtcgcc
ttcattgtccggacagaaggctcagaaatcaccgaggatgagatcaagaaattcgttgca
aaagaggtggtgttctacaagaggatcaacaaggtgttcttcaccgattccatccccaag
aacccttccggcaagatcctcaggaaggacttgagagccaggctcgccgccggcatcccc
gacgccgtcgccgccgccgccgccgatgcgcccaaaagcagctaa

KEGG   Oryza sativa japonica (Japanese rice): 4330407
Entry
4330407           CDS       T01015                                 
Symbol
4CL.2, 4CL2, Os4CL2
Name
(RefSeq) 4-coumarate--CoA ligase 2
  KO
K01904  4-coumarate--CoA ligase [EC:6.2.1.12]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00130  Ubiquinone and other terpenoid-quinone biosynthesis
osa00940  Phenylpropanoid biosynthesis
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
Module
osa_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
osa_M00137  Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00130 Ubiquinone and other terpenoid-quinone biosynthesis
    4330407 (4CL.2)
  09110 Biosynthesis of other secondary metabolites
   00940 Phenylpropanoid biosynthesis
    4330407 (4CL.2)
Enzymes [BR:osa01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.12  4-coumarate---CoA ligase
     4330407 (4CL.2)
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-GeneID: 4330407
NCBI-ProteinID: NP_001403765
LinkDB
Position
2:complement(join(29167395..29167505,29167597..29167699,29167795..29167862,29167934..29168079,29168433..29168631,29169394..29170476))
AA seq 569 aa
MITVAAPEAQPQVAAAVDEAPPEAVTVFRSKLPDIDIPSHLPLHEYCFARAAELPDAPCL
IAAATGRTYTFAETRLLCRRAAAALHRLGVGHGDRVMVLLQNCVEFAVAFFAASFLGAVT
TAANPFCTPQEIHKQFKASGVKLILTQSVYVDKLRQHEAFPRIDACTVGDDTLTVITIDD
DEATPEGCLPFWDLIADADEGSVPEVAISPDDPVALPFSSGTTGLPKGVVLTHRSVVSGV
AQQVDGENPNLHMGAGDVALCVLPLFHIFSLNSVLLCAVRAGAAVALMPRFEMGAMLGAI
ERWRVTVAAVVPPLVLALAKNPFVERHDLSSIRIVLSGAAPLGKELEDALRARLPQAIFG
QGYGMTEAGPVLSMCPAFAKEPTPAKSGSCGTVVRNAELKVVDPDTGFSLGRNLPGEICI
RGPQIMKGYLNDPEATAATIDVEGWLHTGDIGYVDDDDEVFIVDRVKELIKFKGFQVPPA
ELESLLIAHPSIADAAVVPQKDDVAGEVPVAFVVRAADSDITEESIKEFISKQVVFYKRL
HKVHFIHAIPKSASGKILRRELRAKLAAC
NT seq 1710 nt   +upstreamnt  +downstreamnt
atgatcacggtggcggcaccggaggcgcagccgcaggtggcggcggcggtcgatgaggcg
ccgccggaggcggtgacggtgttccggtccaagcttccggacatcgacatccccagccac
ctgcccctgcacgagtactgcttcgccagggcggccgagctccccgacgcgccgtgcctc
atcgcggcggccacggggaggacgtacacgttcgccgagacgcgcctgctgtgccgcagg
gccgccgcggcgctgcaccggctgggcgtcggccacggcgaccgcgtcatggtgctgctc
cagaactgcgtggagttcgccgtggcgttcttcgccgcgtcgttcctcggcgcggtcacc
accgccgccaacccgttctgcacgccgcaggagatccacaagcagttcaaggcctccggc
gtgaagctcatcctcacccagtccgtctacgtcgacaagctccggcagcacgaggcgttc
ccaaggatcgacgcctgcaccgtcggcgacgacacgctcaccgtgatcaccatcgacgac
gacgaggcgacgccggaaggctgcctgccgttctgggacctgatcgcggacgccgacgag
gggtccgtcccggaggtggccatctcgccggacgaccccgtggcgctgccgttctcgtcg
ggcacgacgggcttgcccaagggcgtggtgctgacgcacaggagcgtcgtgtcgggcgtg
gcgcagcaggtggacggcgagaacccgaacctgcacatgggtgccggcgacgtggcgctg
tgcgtgctgccgctgttccacatcttctcgctcaactccgtgctgctgtgcgcggtgcgc
gccggcgcggcggtggcgctgatgcccaggttcgagatgggcgccatgctgggggccatc
gagcggtggcgcgtgacggtggcggccgtcgtgccgccgctcgtgctcgcgctcgccaag
aacccgttcgtggagcgccacgacctcagctccatccgcatcgtgctctccggcgccgcc
ccgctcggcaaggagctcgaggacgccctccgcgcccgcctgcctcaggccatcttcgga
cagggatacgggatgacggaggcggggccggtgctgtcgatgtgcccggcgttcgccaag
gagccgacgccggcgaagtccgggtcgtgcgggacggtggtgcggaacgcggagctcaag
gtggtcgacccggacacgggcttctccctcggccgcaacctccccggcgagatctgcatc
cgcggcccacagatcatgaaaggttacctgaacgatcccgaggcgaccgccgcgacgatc
gacgtcgaggggtggctgcacaccggcgacatcggctacgtcgacgacgacgacgaggtc
ttcatcgtcgaccgtgtcaaggagctcatcaaattcaaggggttccaggtgccgccggcc
gagctggagtcgctgctcatcgctcacccgtccatcgctgacgccgccgtcgtcccgcaa
aaggatgacgtcgccggcgaggtcccggtcgcgttcgtggtccgcgccgccgactccgac
atcacggaggagtccatcaaggaattcatatccaagcaggtggtgttctacaagaggcta
cacaaggtgcacttcatccatgcgatccccaagtcggcgtctgggaagatactgaggaga
gagctcagagccaagctcgcggcgtgctga

KEGG   Oryza sativa japonica (Japanese rice): 4331650
Entry
4331650           CDS       T01015                                 
Symbol
4CLL1
Name
(RefSeq) 4-coumarate--CoA ligase-like 1
  KO
K01904  4-coumarate--CoA ligase [EC:6.2.1.12]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00130  Ubiquinone and other terpenoid-quinone biosynthesis
osa00940  Phenylpropanoid biosynthesis
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
Module
osa_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
osa_M00137  Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00130 Ubiquinone and other terpenoid-quinone biosynthesis
    4331650 (4CLL1)
  09110 Biosynthesis of other secondary metabolites
   00940 Phenylpropanoid biosynthesis
    4331650 (4CLL1)
Enzymes [BR:osa01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.12  4-coumarate---CoA ligase
     4331650 (4CLL1)
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-GeneID: 4331650
NCBI-ProteinID: NP_001404146
LinkDB
Position
3:complement(join(2892185..2892301,2892691..2892793,2892932..2892999,2893731..2893873,2894211..2894403,2895778..2896812))
AA seq 552 aa
MASASVPAAGYGADGVYRSLRPPAPVASDPGLSLTDLLLRRADACPSAVALADAAAGGRA
LTFAELRSAVLSTAVALSSRAGVRPGDAVLLLAPNCVLYPVCFFAVTALGAVGTTVNPDY
TPREIAKQVSDARAKLVITISALVPKIAGLRLPVILLDDDANAAAASLPPDATVTLYTNL
VAGVKEADYRRPPIKQSDTAALLYSSGTTGDSKGVILTHRNFIAAARMVTSDQDERREGP
NVFLCFLPMFHIFGLSVITYAQLHRGNAIIAMSRFDINSLMEAVQRHRVTHLFCVPPVII
ALAKHGKAGKYDLSSLKFIGSGAAPLGKDVMEVVAKKFPDSEIVQGYGMTETCGIISLEY
PEKGQAREFGSTGTLVSGVEAKIVDIKTLKHLPPNQVGEICVRGPNVMQGYFNNVQATEF
TIKQGWLHTGDLGYFDGGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIP
FPDAKAGEVPIAYVVRSPDSSLTEVDVQKFIEKQVAYYKRLKRVTFVGSVPKSASGKILR
RQLIAQVRSSKL
NT seq 1659 nt   +upstreamnt  +downstreamnt
atggcgagcgcgtcggtgccggccgccggctacggcgcggacggcgtgtaccgctcgctg
cgcccgcccgcgcccgtcgcgtccgacccgggcctctccctcaccgacctcctcctccgc
cgcgccgacgcctgcccctccgcggtcgcgctcgccgacgcggccgccggcggccgcgcc
ctcaccttcgcggagctgaggtcggccgtcctctccaccgccgtcgcgctctcctcccgc
gcgggcgtgcgacccggcgacgccgtgctcctcctcgcgcccaactgcgtgctctacccg
gtctgcttcttcgccgtcaccgccctcggcgccgtcggcaccaccgtcaacccggactac
accccgcgggagatcgccaagcaggtctccgacgcgcgcgccaagctcgtcatcaccatc
tccgccctggtgcccaagattgcggggctccgcctccccgtcatcctcctcgacgacgac
gcgaacgccgcggccgcctccttgcctccggacgccaccgtcacgctctacaccaacctc
gtcgccggcgtgaaggaggcggattaccgccgcccaccaatcaagcagagcgacacggcg
gctctcctctactcgtcgggcacgacgggggatagcaagggcgtcatcctgacgcaccgc
aacttcatcgccgcggcgaggatggtgacctccgaccaagacgagcgccgggaggggccc
aacgtgttcctctgcttcctccccatgttccacatcttcggcctgtccgtcatcacgtac
gcgcagctgcatcgcgggaacgccatcatcgccatgtcgcggttcgacatcaactccctg
atggaggccgtgcagaggcaccgcgtcacgcacctgttctgcgtgccgccggtcattatc
gcgctcgccaagcacgggaaggccggtaagtacgatctcagctctctcaagttcatcggc
tccggcgccgcgccgctcggcaaggatgtgatggaggtcgtggccaagaaattcccggac
agtgagattgttcagggttatggtatgactgagacttgtggaatcatatcgctcgagtac
ccagaaaaaggacaggctcgtgaatttgggtcaactggcacgcttgtctcaggagttgag
gcaaagattgtcgacataaagacattaaaacatctaccgcccaatcaagtaggagaaatt
tgtgttcgagggccaaatgtaatgcaagggtatttcaacaatgtgcaagctactgaattt
acaatcaagcaagggtggttgcacactggtgatcttggatacttcgacggaggaggccag
ctttttgttgttgatagacttaaagaactgattaagtacaaaggtttccagattgcacct
gccgagcttgaagggttacttctatctcatccagagattctagatgctgttgttatcccg
tttcctgatgctaaagctggggaggttcccattgcctatgttgttcggtcacctgacagt
tcattgacagaagttgatgtccaaaaatttattgaaaaacaggtggcgtactacaaaaga
ttgaagagagttacctttgtgggcagcgtgcccaaatcagcttcaggaaagattctgaga
aggcagcttatcgcccaagtgagatcatccaagttgtag

KEGG   Oryza sativa japonica (Japanese rice): 4341718
Entry
4341718           CDS       T01015                                 
Symbol
4CL4, Os4CL4, RAL1
Name
(RefSeq) 4-coumarate--CoA ligase 4
  KO
K01904  4-coumarate--CoA ligase [EC:6.2.1.12]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00130  Ubiquinone and other terpenoid-quinone biosynthesis
osa00940  Phenylpropanoid biosynthesis
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
Module
osa_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
osa_M00137  Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00130 Ubiquinone and other terpenoid-quinone biosynthesis
    4341718 (4CL4)
  09110 Biosynthesis of other secondary metabolites
   00940 Phenylpropanoid biosynthesis
    4341718 (4CL4)
Enzymes [BR:osa01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.12  4-coumarate---CoA ligase
     4341718 (4CL4)
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-GeneID: 4341718
NCBI-ProteinID: NP_001408603
LinkDB
Position
6:complement(join(27807591..27807734,27807968..27808070,27808154..27808367,27811171..27811369,27812328..27812681,27813249..27813914))
AA seq 559 aa
MGSMAAAAEAAQEEETVVFRSKLPDIEIPSHLTLQAYCFEKLPEVAARPCLIDGQTGAVY
SYGEVEELSRRAAAGLRRLGVGKGDVVMSLLRNCPEFAFTFLGAARLGAATTTANPFYTP
HEIHRQASAAGARVIVTEACAVEKVRGFAADRGIPVVAVDGDFDGCVGFGEAMLDASIEP
LDADEEVHPDDVVALPYSSGTTGLPKGVMLTHRSLVTSVAQQVDGENPNLYFRREDVVLC
LLPLFHIYSLNSVLLAGLRAGSAIVIMRKFDLGALVDLTRRHGVTVAPFVPPIVVEIAKS
PRVTADDLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKE
PFEVKSGSCGTVVRNAELKIVDPDTGATLGRNQSGEICIRGEQIMKGYLNDPESTKNTID
KGGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPDIKDAAVVPMI
DEIAGEVPVAFIVRIEGSAISENEIKQFVAKEVVFYKRLNKVFFADSIPKSPSGKILRKD
LRAKLAAGIPTNDNTQLKS
NT seq 1680 nt   +upstreamnt  +downstreamnt
atggggtccatggcggcggcggcggaggcggcgcaggaggaggagacggtggtgttccgg
tccaagctccccgacatcgagatccccagccacctcaccctgcaggcctactgcttcgag
aagcttccggaggtggccgcccgcccctgcctcatcgacgggcagaccggggcggtgtac
agctacggcgaggtggaggagctctcccggcgcgcggcggcggggctgcggcggctcggg
gtggggaagggcgacgtggtgatgagcctcctccgcaactgccccgagttcgccttcacc
ttcctcggcgccgccaggctgggcgcggccaccaccaccgccaacccgttctacaccccg
cacgagatccaccgccaggcgtcggcggcgggcgccagggtgatcgtgaccgaggcgtgc
gcggtggagaaggtgcgcgggttcgccgccgaccgcggcatccccgtggtcgccgtcgac
ggggacttcgacggctgcgtcgggttcggggaggcgatgctggacgcgtccatcgagccg
ctcgacgccgacgaggaggtccaccccgacgacgtcgtcgccctcccttactcctccggc
accaccggcttgcccaagggcgtcatgctcacccaccgcagcctcgtcaccagcgtcgcg
cagcaggtggacggggagaacccgaacctgtacttcaggagggaggacgtggtgctgtgc
ttgctgccgctgttccacatctactcgctcaactccgtgctgctggcggggctgcgagcc
gggtcggcgatcgtgatcatgcgcaagttcgacctgggcgcgctggtggacctgacgcgg
aggcacggcgtcaccgtcgcgccgttcgtgccgcccatcgtggtggagatcgccaagagc
ccccgcgtcaccgccgacgacctcgcctccatccgcatggttatgtccggcgccgccccc
atggggaaggacctccaggacgccttcatggccaagatccccaacgccgtcctgggacag
gggtatgggatgactgaggctggacctgtgctggccatgtgtctggccttcgcaaaggag
ccattcgaggtcaagtccggctcgtgcgggacagtcgtcagaaacgcggagctgaagatc
gttgaccctgacaccggcgccacccttggccggaaccagtccggggagatttgcatccgg
ggagaacaaatcatgaaaggttatctgaatgacccggagtccacgaagaacaccatcgac
aagggcggttggctgcacacaggagacattggttatgttgacgacgacgacgagattttc
attgttgaccggctcaaggaaataataaaatacaaggggttccaagtacctcctgcggaa
cttgaagctcttctcatcacacaccctgatatcaaggatgctgccgttgtaccgatgata
gacgaaattgcgggtgaagtgccggttgcattcattgtacggattgaaggatctgcaatc
agcgagaatgagatcaagcaatttgtggcaaaggaggttgttttctacaagaggctcaac
aaagttttcttcgcggattcaattccgaagagtccttctggcaagattctcaggaaggac
ctcagagcaaagcttgcagccggcatccctaccaatgataatacacagttgaaaagctaa

KEGG   Oryza sativa japonica (Japanese rice): 4342925
Entry
4342925           CDS       T01015                                 
Symbol
4CLL7
Name
(RefSeq) 4-coumarate--CoA ligase-like 7
  KO
K01904  4-coumarate--CoA ligase [EC:6.2.1.12]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00130  Ubiquinone and other terpenoid-quinone biosynthesis
osa00940  Phenylpropanoid biosynthesis
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
Module
osa_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
osa_M00137  Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00130 Ubiquinone and other terpenoid-quinone biosynthesis
    4342925 (4CLL7)
  09110 Biosynthesis of other secondary metabolites
   00940 Phenylpropanoid biosynthesis
    4342925 (4CLL7)
Enzymes [BR:osa01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.12  4-coumarate---CoA ligase
     4342925 (4CLL7)
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-GeneID: 4342925
NCBI-ProteinID: NP_001409031
LinkDB
Position
7:join(10727325..10728371,10732345..10732531,10732996..10733141,10733233..10733300,10733532..10733760)
AA seq 558 aa
MAAPTSMANADGESTRTGYCAATKSFRSLRPPVPLPPPDVPLSFPEFAFSLLPRSSSSSS
SSLLPANPALVDAATGEAVSFQAFLSRVRALAGALRSRVGLRGGDVAFVLAPAGLDVPVL
YFALLSIGAVVSPANPALTPAEVSRLVSLSGASVAFAVSSTATKLPAGLTTVVLLDSPHF
RSLLMDCGQAQGQEPLPVVVVRQSETAAIQYSSGTTGRVKAAALPHRSFIAMVAGFHALR
AKAREVRTLLGAPMFHSMGFLFVLQGVALGATTVVVTDAVARAGIRGLVEAAERWAVMDM
TASPPVVLGMTKQRCRLPALERITCGGAPLPAPAIERFRRRFPHVDLCMGYGSTEAGGIS
RMISQEECNHIGSAGRVTENVEVKIVDHVTGKPLPAGQQGELWVRGPAVMTGYVGDNEAN
ATTFNSEGWLKTGDLCYIDQDGFLFVVDRLKELIKYKAYQVPPAELELVLHSLPQIVDAA
VMPYPHEEAGQIPVALVVKQPGSKLTEAEVMYNVAKQVAPYKKIRKVLFVDSIPKSPSGK
ILRRELVNHLRLCELSRL
NT seq 1677 nt   +upstreamnt  +downstreamnt
atggcagctcccacctccatggcgaacgcggatggcgagagcacgcgcaccggctactgc
gccgcgaccaagtcgttccgcagcctccggccgccggtgccgctgcctccgccggacgtc
ccgctctccttcccggagttcgcgttctcgctgctgccgcggtcgtcgtcgtcgtcgtcg
tcgtctcttctcccggcgaacccggcgctcgtcgacgcggccactggcgaggccgtctcg
ttccaggcgttcctgtcgcgggtgcgcgcgctcgccggagccctccgctcgcgcgtcggg
ctgcgcggcggcgacgtcgcgttcgtgctcgcgcccgcagggctcgacgtgcccgtgctg
tacttcgcgctcctctccatcggcgccgtcgtgtcccccgccaacccggccctcaccccc
gccgaggtttcccgcctcgtctccctctccggcgcatccgtcgccttcgccgtctcgtcc
acagccaccaagctccccgctggcctcaccaccgtcgtcctcctcgactcgccacacttc
cgctccctcttgatggattgcggccaagcccaaggacaggagccgctgccggtggtggtg
gtgcggcagtcggagacggcggcgatccagtactcctcggggacgacggggcgggtgaag
gcggcggcgctgcctcaccggagcttcatcgccatggtggcagggttccacgcgctgcgg
gccaaggctcgggaggtcaggacgctgctcggtgccccgatgttccactccatggggttc
ttgttcgtgctgcagggcgtcgcgctgggggcgacgacggtggtggtgacggacgcggtg
gcgcgggccgggatacgggggctcgtggaggcggcggagcgttgggcggtcatggacatg
acggcctcgccgccggtggtgctggggatgaccaagcagaggtgccggctgccggcgctg
gagcggataacctgcggcggcgccccgctgccggcgccggcgatcgaacggttccgccgg
cgattcccccacgtcgatttgtgcatgggttatggatcaaccgaggcaggtggcatatca
aggatgatcagccaggaagagtgcaaccacataggctctgctggccgtgtcactgagaat
gtcgaggtaaagattgttgaccatgtaacaggcaagccattgcctgccgggcagcaaggg
gagctttgggtgagagggcctgccgtcatgacaggttacgtgggtgacaacgaggccaat
gcaaccacctttaattctgaaggatggctgaaaactggtgacctttgctatattgatcag
gacgggtttctttttgtagttgacaggctaaaggaactgattaaatacaaggcctaccag
gtaccacctgcagagctggagcttgtcctgcattctttgccacaaattgttgatgctgca
gttatgccgtatcctcacgaagaagcagggcagataccagtagcacttgtcgtaaagcaa
ccaggaagcaagcttactgaagcagaagtcatgtacaatgtcgccaagcaggtagctcca
tacaagaagatccggaaagtgctgtttgttgactccatacccaaatcgccatctgggaag
atcttgagaagggaattggtaaatcatctgcggttgtgtgaattgtcgagattgtga

KEGG   Oryza sativa japonica (Japanese rice): 4345054
Entry
4345054           CDS       T01015                                 
Symbol
4CL, 4CL1, Os4CL1
Name
(RefSeq) 4-coumarate--CoA ligase 1
  KO
K01904  4-coumarate--CoA ligase [EC:6.2.1.12]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00130  Ubiquinone and other terpenoid-quinone biosynthesis
osa00940  Phenylpropanoid biosynthesis
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
Module
osa_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
osa_M00137  Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00130 Ubiquinone and other terpenoid-quinone biosynthesis
    4345054 (4CL)
  09110 Biosynthesis of other secondary metabolites
   00940 Phenylpropanoid biosynthesis
    4345054 (4CL)
Enzymes [BR:osa01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.12  4-coumarate---CoA ligase
     4345054 (4CL)
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-GeneID: 4345054
NCBI-ProteinID: NP_001409439
LinkDB
Position
8:join(8930031..8931083,8932032..8932230,8933645..8933858,8933999..8934104,8934222..8934344)
AA seq 564 aa
MGSMEQQQPESAAPATEASPEIIFRSKLQDIAITNTLPLHRYCFERLPEVAARPCLIDGA
TGGVLTYADVDRLSRRLAAALRRAPLGLRRGGVVMSLLRNSPEFVLSFFAASRVGAAVTT
ANPMSTPHEIESQLAAAGATVVITESMAADKLPSHSHGALTVVLIDERRDGCLHFWDDLM
SEDEASPLAGDEDDEKVFDPDDVVALPYSSGTTGLPKGVMLTHRSLSTSVAQQVDGENPN
IGLHAGDVILCALPMFHIYSLNTIMMCGLRVGAAIVVMRRFDLAAMMDLVERHRVTIAPL
VPPIVVAVAKSEAAAARDLSSVRMVLSGAAPMGKDIEDAFMAKLPGAVLGQGYGMTEAGP
VLSMCLAFAKEPFKVKSGACGTVVRNAELKIIDPDTGKSLGRNLPGEICIRGQQIMKGYL
NNPEATKNTIDAEGWLHTGDIGYVDDDDEIFIVDRLKEIIKYRGFQVAPAELEALLITHP
SIADAAVVGKQIEPEIGEIPVAFVAKTEGSELSEDDVKQFVAKEVIYYKKIREVFFVDKI
PKAPSGKILRKELRKQLQHLQQEA
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggggtccatggagcagcagcagccggagtcggcggcgccggcgacggaggcgtcgccg
gagatcatcttccggtcgaagctgcaagacatcgccatcaccaacaccctcccgctccac
cgctactgcttcgagcggctcccggaggtggcggcgcgcccatgcctcatcgacggagcc
accggcggcgtgctcacctacgccgacgtcgaccgcctgtcccgccgcctcgccgccgcg
ctccgccgcgcgccgctggggctccggcggggcggcgtcgtgatgagcctgctgcggaac
tcgccggagttcgtgctgtccttcttcgccgcgtcgcgcgtcggcgccgcggtgaccacg
gcgaacccaatgtccaccccgcacgagatcgagagccagctcgccgccgccggcgccacc
gtcgtcatcaccgagtccatggccgccgacaagctcccctcccactcccacggcgccctc
accgtcgtcctcatcgacgagcgccgcgacggctgcctccacttctgggacgacctcatg
tcggaggacgaagcgtcgccgctcgccggcgacgaggacgacgagaaggtgttcgacccg
gacgacgtggtggcgctgccgtactcgtcggggacgacgggtctccccaagggggtgatg
ctaacgcaccggagcctgagcacgagcgtggcgcagcaggtcgacggcgagaacccaaac
atcgggctccacgccggcgacgtgatcctgtgcgcgctgcccatgttccacatctactcg
ctcaacaccatcatgatgtgcggcctccgcgtcggcgccgccatcgtcgtcatgcgccgc
ttcgacctcgccgccatgatggacctcgtcgagcgccaccgcgtcaccatcgcgccgctc
gtgccgcccatcgtcgtggccgtggccaagagcgaggcggcggcggcgcgagacctctcg
tcggtgcggatggtgctctccggcgcggcgcccatgggcaaggacatcgaggacgcgttc
atggccaagctccccggcgccgtgctcggacaggggtatggaatgactgaggcagggcca
gtgctgtcaatgtgcctagcattcgccaaggagcccttcaaggtgaagtccggtgcgtgc
gggacggtggtgcgcaacgccgagctgaagatcatcgaccccgacaccgggaagtcgctt
ggccggaacctgcccggcgagatctgcatcagggggcaacagatcatgaaaggttacctg
aacaacccagaggccacgaagaacaccattgatgcagaagggtggctgcacaccggcgac
atcggctacgtcgacgacgacgacgagatcttcatcgtggataggctcaaggagatcatc
aaatacaggggcttccaggtagcccctgcagagctggaggcccttctcatcacccatcca
agcattgctgatgctgctgttgttgggaaacaaattgagcctgaaatcggagaaatacca
gtcgccttcgtggcgaaaaccgaagggagtgagctgagtgaagatgatgtcaaacaattc
gtagcaaaggaggtgatctactacaagaagatccgggaggtcttcttcgttgacaaaatc
cccaaggcgccgtcagggaagatcctgagaaaggaactgaggaagcagctgcaacatctt
caacaagaagcttaa

KEGG   Oryza sativa japonica (Japanese rice): 4345717
Entry
4345717           CDS       T01015                                 
Symbol
4CL5, Os4CL5
Name
(RefSeq) 4-coumarate--CoA ligase 5
  KO
K01904  4-coumarate--CoA ligase [EC:6.2.1.12]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00130  Ubiquinone and other terpenoid-quinone biosynthesis
osa00940  Phenylpropanoid biosynthesis
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
Module
osa_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
osa_M00137  Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00130 Ubiquinone and other terpenoid-quinone biosynthesis
    4345717 (4CL5)
  09110 Biosynthesis of other secondary metabolites
   00940 Phenylpropanoid biosynthesis
    4345717 (4CL5)
Enzymes [BR:osa01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.12  4-coumarate---CoA ligase
     4345717 (4CL5)
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-GeneID: 4345717
NCBI-ProteinID: NP_001409511
LinkDB
Position
8:complement(join(22011936..22012058,22012159..22012261,22012379..22012592,22012725..22012923,22013019..22013999))
AA seq 539 aa
MGSLPEQFVFRSRLPDIAIPDHLPLHDYVFERLADRRDRACLIDGATGETLSFGDVDALS
RRVAAGLSSIGVCHGSTVMLLLPNSVEFAVAFLASSRLGAVTTTANPLHTPPEIAKQVAA
SGATVVVTEPAFVAKVSGLAGVTVVATGGGAERCASFAGLAAADGSALPEVAIDVANDAV
ALPYSSGTTGLPKGVMLSHRGLVTSVAQLVDGENPNLHLREDDVVLCVLPMFHVYSLHSI
LLCGMRAGAAIVVMKRFDTVKMLQLVERHGVTIAPLVPPIVVEMAKSDALDRHDLSSIRM
VISGAAPMGKELQDIVHAKLPNAVLGQGYGMTEAGPVLSMCMAFAKEPTPVKSGACGTVV
RNAELKIVDPDTGLSLPRNQPGEICIRGKQIMKGYLNNPEATEKTIDKDGWLHTGDIGFV
DDDDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHAAVADAAVVPMKDDSCGEIPVAFVV
ARDGSGITDDEIKQYVAKQVVFYKRLHKIFFVDAIPKAPSGKILRKDLRAKLAAGIPAC
NT seq 1620 nt   +upstreamnt  +downstreamnt
atgggttcgttgccggagcagttcgtcttccgctcgaggctccccgacatcgccatcccg
gaccacctcccgctgcacgactacgtgttcgagcgcctcgccgaccgccgcgaccgggca
tgccttatcgatggcgccacgggggagacgctctcgttcggcgacgtcgacgcgctgtcg
cgccgcgtggcggctgggttgagctcgattggtgtttgccatggtagtaccgtgatgctg
ctgctgccgaactccgtcgagttcgcggtggcgttcctcgcgtcgtcacggctcggggcg
gtcaccaccacggccaacccgctgcacaccccgccggagatcgccaagcaggtggcggcg
tccggcgcgacggtggtggtcaccgagccggcgttcgtcgccaaggtgagcggcctcgcg
ggcgtgaccgtcgtcgccaccgggggcggcgccgagaggtgcgcgtcgttcgcgggcctc
gccgccgccgacggctcggcgctgccggaggtcgccatcgacgtcgccaacgacgccgtg
gcgctgccctactcgtcgggcacgacggggctccccaagggggtgatgctgtcgcaccgc
gggctggtgaccagcgtggcgcagctcgtcgacggcgagaacccgaacctccacctccgg
gaggacgacgtggtgctctgcgtgctccccatgttccacgtctactccctccactccatc
ctcctctgcgggatgcgcgccggcgccgccatcgtggtcatgaagcggttcgacaccgtc
aagatgctgcagctggtggagcgccacggcgtcaccatcgcgccgctcgtccctcccatc
gtcgtcgagatggccaagagcgacgccctcgaccgccacgacctctcctccatccgcatg
gtcatctccggcgccgcccccatgggcaaggagcttcaggacatcgtccacgccaagctc
cccaacgccgtcctcggacaggggtacgggatgacggaggcagggccggtgctatcaatg
tgcatggcgttcgcgaaggagccgacgccggtgaagtccggcgcgtgcggcacggtggtg
cggaacgccgagctgaagatcgtcgacccggacaccggcttgtcactcccgcgcaaccag
ccgggggagatttgcatcaggggaaaacaaatcatgaaaggatacctgaacaacccggag
gcgaccgagaagacgatcgacaaggacgggtggctgcacactggcgacatcggcttcgtc
gacgacgacgacgagatcttcatcgtggaccggctcaaggagctcatcaagtacaagggc
ttccaggtcgcccccgccgagctcgaggccatgctcatcgcccacgccgccgtcgccgac
gccgccgtcgtcccaatgaaggacgattcctgcggcgagatcccagtggcgttcgtcgtc
gcacgcgacggctcggggatcaccgacgacgagatcaagcagtacgtcgcaaagcaggtg
gtgttctacaagaggctgcacaagatcttcttcgtggacgcaatcccgaaggcgccgtcg
ggaaagattttgaggaaggatctgagagcaaagttggctgctggaattccggcgtgctga

KEGG   Oryza sativa japonica (Japanese rice): 9267647
Entry
9267647           CDS       T01015                                 
Name
(RefSeq) LOW QUALITY PROTEIN: 4-coumarate--CoA ligase-like 9
  KO
K01904  4-coumarate--CoA ligase [EC:6.2.1.12]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00130  Ubiquinone and other terpenoid-quinone biosynthesis
osa00940  Phenylpropanoid biosynthesis
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
Module
osa_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
osa_M00137  Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00130 Ubiquinone and other terpenoid-quinone biosynthesis
    9267647
  09110 Biosynthesis of other secondary metabolites
   00940 Phenylpropanoid biosynthesis
    9267647
Enzymes [BR:osa01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.12  4-coumarate---CoA ligase
     9267647
SSDB
Motif
Pfam: AMP-binding AMP-binding_C AMP-binding_C_3 DUF3043
Other DBs
NCBI-GeneID: 9267647
NCBI-ProteinID: XP_015635191
LinkDB
Position
4:complement(join(14309273..14309501,14309746..14311384))
AA seq 622 aa
MTQPNLTYTPLVMVTHKNRVILATTTTTTMSSPSSRHPSSPXLSTNARAPATPTTTQEAC
AADRHRDMGDAAVPAMVVEEEEQEHVFRSRFPPVAVPDGVTVPEFVLDGAEAYADRVALV
EAAAGGRSYTYGEVARDTARFARALRSVGVRKGHVVVVALPNLAVYPVVSLGIMSAGAVF
SGVNPRALAAEIKKQVEDSEAKLVVANEVAFDKVKDAGVPVIGVGDRERMPGAISWDGLL
AAADRTGAGVVPVDAAQQSDLCALPYSSGTTGVSKGVMLSHRNLVSNLCSSMFAVAPETA
GQVVTLGLMPFFHIYGITGICCATLRHKGTVVVMDRFDLRTFLRALVDHRVMFAPLVPPV
MLAMVKSPVADEFDLSDLALKSVMTAAAPLAPDLLAAFQRKFPGVQVEEAYGLTEHSCIT
LTHAAGDGHGHVAKKSSVGFILPNLEVKFVDPDTGRSLPANTPGELCVRSQSVMQGYYKR
KEETERTVDGKGWLHTGDVGYIDGDGDVFIVDRIKELIKYKGFQVAPAELEAVLLSHPSV
EDAAVFGVPDEEAGEVPVACVVRRHGAEEGEEEIVAYVAERVASYKRVRVLHIVDAIPKS
VSGKILRRQLRDEFIKRMKPSA
NT seq 1868 nt   +upstreamnt  +downstreamnt
atgacccaaccaaacctcacctacaccccactagtcatggtaacacacaagaaccgtgtc
atcctcgccacgaccaccaccaccaccatgtcgtcgccttcctctcgccacccctcgtca
ccacgctctctacaaatgccagagctccggccacccccaccaccacccaagaagcctgcg
ccgccgaccggcatcgcgacatgggcgacgccgcggtacccgccatggtggtggaggagg
aggaacaggagcacgtgttccggagcaggttcccgccggtggccgtgccggacggcgtca
ccgtgccggagttcgtgctggacggcgccgaggcctacgccgacagggtggcgctcgtgg
aggccgcggcgggcgggcggtcgtacacgtacggcgaggtggcgcgcgacacggcgcggt
tcgccagggcgctccggtcggtgggcgtccggaaggggcacgtcgtcgtcgtcgcgctcc
caaacctcgccgtgtaccccgtcgtgtcgctcgggatcatgtcggcgggggccgtgttct
ccggcgtgaacccgcgcgcgctcgccgcggagatcaagaagcaggtggaggactccgagg
cgaagctggtcgttgccaacgaggtcgcgttcgacaaggtgaaggacgccggcgtgccgg
tgatcggcgtcggcgacagggagcggatgcctggggcgatcagctgggacgggctcctcg
ccgcggcggaccgcaccggcgccggggtggtgccggtggacgcggcgcagcagtccgacc
tgtgcgcgctcccctactcctccggcaccaccggcgtgtccaagggcgtgatgctgagcc
accgcaacctggtgtccaacctctgctcgtccatgttcgccgtggcgccggagacggccg
ggcaggtggtgacgctggggctcatgccgttcttccacatctacggcatcaccggcatct
gctgcgccacgctccggcacaagggcacggtggtggtgatggaccgcttcgacctccgca
cgttcctccgtgcgctcgtcgaccaccgcgtcatgttcgcgccgctggttccccccgtga
tgctcgccatggtcaagagccccgtcgccgacgagttcgacctctccgacctcgccctca
agtccgtcatgaccgccgccgcgccgctcgcccccgacctcctcgccgcgttccagcgca
agttccccggcgtgcaggtggaggaagcctacggcctcaccgagcacagctgcatcaccc
tcacgcacgccgccggcgacggccacggccacgtcgccaagaagagctcggtggggttca
tcctgccgaacctggaggtgaagttcgtggacccggacaccgggaggtcgctgccggcga
acacgccgggggagctgtgcgtgcggagccagagcgtgatgcaggggtactacaagagga
aggaggagacggagcgcacggtggacggcaaggggtggctgcacaccggcgacgttgggt
acatcgacggcgacggcgacgtgttcatcgtggacaggatcaaggagctgatcaagtaca
aggggtttcaggtcgcccccgccgagctcgaggccgtcctcctctcccacccctccgttg
aggacgccgccgtcttcggggtgccggacgaggaggccggcgaggtgccggtggcgtgcg
tggtgcggcggcacggtgcggaggagggggaggaggagatagtggcgtacgtggcggaga
gggtggcgtcgtacaagcgggtccgggtgctgcacatcgtcgacgccatccccaagtcgg
tgtccgggaagatcctgaggaggcagcttagggacgagttcatcaagaggatgaaaccgt
cagcttga

KEGG   Oryza sativa japonica (Japanese rice): 9269113
Entry
9269113           CDS       T01015                                 
Name
(RefSeq) 4-coumarate--CoA ligase-like 3
  KO
K01904  4-coumarate--CoA ligase [EC:6.2.1.12]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00130  Ubiquinone and other terpenoid-quinone biosynthesis
osa00940  Phenylpropanoid biosynthesis
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
Module
osa_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
osa_M00137  Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00130 Ubiquinone and other terpenoid-quinone biosynthesis
    9269113
  09110 Biosynthesis of other secondary metabolites
   00940 Phenylpropanoid biosynthesis
    9269113
Enzymes [BR:osa01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.12  4-coumarate---CoA ligase
     9269113
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-GeneID: 9269113
NCBI-ProteinID: XP_015650198
UniProt: Q6YYZ2
LinkDB
Position
8:join(2394581..2395705,2396129..2396318,2396552..2396691,2396871..2396938,2397059..2397161,2397438..2397587)
AA seq 591 aa
MQRDAIAAARNAGCSSGRISQPPPPPFYSAATGIYSSIHPPVALPTDPSLTLVAHLFARL
PLADPGAPTLVDAATASAVSRADLRRLVASLAAGLRRRHGVRKGSVVLLLLPNSVAFPVS
FLAVLAAGAVATTMNPSSSPAEIAAQARATGACLVLASRDGAARLPPLAAPVVLVPEILD
HSAAADDGDDDQRVFAAFRAMLDGGGGDGTETAVPVVGQDDAVAILYSSGTSGRSKGVVL
THRNLIAMTELFVRFEASQYHARGARENVYMAALPMSHVYGLSLFAVGLLSIGATVVVMR
RFDAGDAVAAIGRYKVTHMPLVPPIMAAMVRAAAAGGVPPSQVASLVQVSCGAAPITAAL
IHEFLQAFPHVDFIQGYGMTESTAVGTRGFNTSKHKKYTSVGLLAPNMHAKIVHLESSSC
LPPGFSGELWLHGPGIMKGYLSDDDDACTRKDGWLRTGDIAYFDLDGYLYIVGRLKDTIK
YKGFQIAPGDLEEVLIHHPEILDVAVTSAEDEEAGEIPVAFVVRRSGSNLSCKQVMEYVA
KQVAPYKRVRKVVFVEAIPKSPAGKVLRRLLRNSHDTAAAATSSCSISSKL
NT seq 1776 nt   +upstreamnt  +downstreamnt
atgcagcgcgacgcgatcgccgccgcccggaacgccggctgctcgagcggccgcatctcg
cagccgccgccgccgccgttctactccgccgccaccggaatctacagcagcatccaccct
cccgtggcgctccccaccgacccctccctcaccctcgtcgcccacctcttcgcccgcctc
cccctcgccgacccgggcgcccccaccctcgtcgacgccgccaccgcgtccgcggtgtcc
cgcgccgacctccgccgcctcgtcgcctccctcgccgcggggctccgccgccgccatggc
gttcggaaggggtccgttgtgctgctgctcctcccgaactccgtcgcgttccccgtctcg
ttcctcgccgtgctcgccgccggcgccgtcgccaccaccatgaacccctccagctccccc
gccgagattgccgcccaggcgcgggccaccggcgcatgcctcgtcctcgcctcgcgcgac
ggcgccgcgaggctcccgcctctcgctgcccccgtcgtcctcgtgcccgaaatcctggac
cattccgccgcggccgacgacggcgacgacgaccaacgcgtgttcgccgcgttccgcgcc
atgctcgacggcggcggcggcgacggcaccgagacggcggtcccggtggtgggccaggac
gacgcggtggccatcctctactcgtcggggacgtcggggaggagcaagggggtggtgctg
acgcaccgcaacctgatcgccatgacggagctgttcgtccggttcgaggcgtcgcagtac
cacgcgcgaggtgctcgcgaaaatgtctacatggcggcgctgcccatgtcccacgtgtac
ggcctctccctcttcgccgtcggcctcctctcgatcggtgccacggtggtggtgatgagg
agattcgacgccggcgacgccgtcgccgccatcgggaggtacaaggtgacgcacatgccg
ctcgtgccgcccatcatggcggccatggtcagggccgccgcggccggcggcgtgccgccg
tcgcaggtggcctcgctggtgcaggtctcgtgcggcgcggctccgatcaccgccgcgctc
atccacgaattccttcaggctttcccccacgtcgacttcattcagggttatggcatgaca
gaatctactgccgtaggaactcgcggatttaacactagcaagcacaaaaagtatacctcg
gtaggccttttggcccccaacatgcacgccaagattgttcatcttgagagtagttcatgt
ttgcctccaggcttctcaggggagctatggctccatggcccaggaatcatgaaaggttac
ttgagtgatgatgatgatgcctgcacgagaaaggatggctggttgcgtaccggagacatt
gcctactttgatctggatggctacctatacattgtaggccgcttgaaggacacaatcaag
tacaaaggatttcagatagctccgggggacttggaagaagttttgatccaccaccctgaa
attcttgatgttgctgtgacatctgctgaggatgaagaagctggagagataccagtagct
tttgtggtgaggagatctggaagcaacctttcttgtaagcaagtgatggagtatgtggcc
aagcaggttgctccatataagagagtgaggaaggtggtatttgtggaggcaattcccaag
tcacctgctggaaaagttttgaggaggcttctcaggaactcgcatgacactgctgctgct
gctacctcttcttgcagtatcagctccaagctctga

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