Oryza sativa japonica (Japanese rice): 112936215
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Entry
112936215 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K03505
DNA polymerase delta subunit 4
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03030
DNA replication
osa03410
Base excision repair
osa03420
Nucleotide excision repair
osa03430
Mismatch repair
osa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112936215
03410 Base excision repair
112936215
03420 Nucleotide excision repair
112936215
03430 Mismatch repair
112936215
03440 Homologous recombination
112936215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
osa03032
]
112936215
03400 DNA repair and recombination proteins [BR:
osa03400
]
112936215
DNA replication proteins [BR:
osa03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
112936215
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
112936215
MMR (mismatch excision repair)
DNA polymerase delta complex
112936215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_delta_4
SH3BGR
Motif
Other DBs
NCBI-GeneID:
112936215
NCBI-ProteinID:
XP_025875805
LinkDB
All DBs
Position
8:complement(join(27376082..27376374,27376467..27376578))
Genome browser
AA seq
134 aa
AA seq
DB search
MAGGGVKGFYRQKKKGGVAKKPISRKKLPPQNCSESQDCGDHDLGDEVEEQLQQFDMDMT
YGPCIGMTRLRRWERAAAMGLRPPPRLRDLLLPPPAPHPLPSSSSSPAKILTGSSGGGGS
TSVQGECLWEGKVS
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atggccggcggcggcgtgaagggcttctaccggcagaagaagaaaggcggcgtcgccaag
aaaccaatatccagaaagaaattaccgccacagaactgctccgaatcccaagattgcggt
gatcatgatcttggcgacgaggtggaggagcagctgcagcagttcgacatggacatgacg
tacggcccgtgcatcggcatgacgcgcctccgacggtgggagcgcgccgccgccatgggc
ctgcgaccgccgccccgtctccgggacctactcctgccacctccggcgcctcatcctctg
ccatcgtcttcttcgtctccggccaagattctcaccggcagcagcggcggcggcggtagc
acctccgtgcagggcgagtgcctctgggaaggcaaagtgagctag
Oryza sativa japonica (Japanese rice): 4344737
Help
Entry
4344737 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K03505
DNA polymerase delta subunit 4
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03030
DNA replication
osa03410
Base excision repair
osa03420
Nucleotide excision repair
osa03430
Mismatch repair
osa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
4344737
03410 Base excision repair
4344737
03420 Nucleotide excision repair
4344737
03430 Mismatch repair
4344737
03440 Homologous recombination
4344737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
osa03032
]
4344737
03400 DNA repair and recombination proteins [BR:
osa03400
]
4344737
DNA replication proteins [BR:
osa03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
4344737
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
4344737
MMR (mismatch excision repair)
DNA polymerase delta complex
4344737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_delta_4
Motif
Other DBs
NCBI-GeneID:
4344737
NCBI-ProteinID:
XP_015649425
UniProt:
Q0J7T7
LinkDB
All DBs
Position
8:complement(join(3775336..3775571,3775659..3775791))
Genome browser
AA seq
122 aa
AA seq
DB search
MRSGGDVRSFFRQQKAHAAGGVKPTGGVSKKAALPRHHHKPASQATPDRAVDDARRHVEE
AEEEEGRERMAREFDMDMRYGPCLGLTRAQRWRRAAALGLAPPPAVIAVCSDDQPCLWEG
RV
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcggcggcgacgtcaggtccttcttccggcagcagaaggcccacgccgccggc
ggcgtcaagcccaccggcggcgtctccaagaaggcggcgctgccccgccaccaccacaag
cccgcgtcgcaggcgacgccagatcgcgccgtcgacgacgcgaggaggcacgtcgaggag
gcggaggaggaggaggggcgggagaggatggctcgggagttcgacatggacatgcggtac
gggccctgcctcggcctcacccgcgcccagcgctggcgccgcgccgccgcgctcggcctc
gccccgccgcccgccgtcatcgccgtctgctccgacgaccagccgtgcctctgggagggc
cgcgtctag
Oryza sativa japonica (Japanese rice): 4347604
Help
Entry
4347604 CDS
T01015
Symbol
P0669G04.6
Name
(RefSeq) uncharacterized LOC4347604
KO
K03505
DNA polymerase delta subunit 4
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03030
DNA replication
osa03410
Base excision repair
osa03420
Nucleotide excision repair
osa03430
Mismatch repair
osa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
4347604 (P0669G04.6)
03410 Base excision repair
4347604 (P0669G04.6)
03420 Nucleotide excision repair
4347604 (P0669G04.6)
03430 Mismatch repair
4347604 (P0669G04.6)
03440 Homologous recombination
4347604 (P0669G04.6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
osa03032
]
4347604 (P0669G04.6)
03400 DNA repair and recombination proteins [BR:
osa03400
]
4347604 (P0669G04.6)
DNA replication proteins [BR:
osa03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
4347604 (P0669G04.6)
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
4347604 (P0669G04.6)
MMR (mismatch excision repair)
DNA polymerase delta complex
4347604 (P0669G04.6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_delta_4
zf-CCCH_10
Motif
Other DBs
NCBI-GeneID:
4347604
NCBI-ProteinID:
NP_001409778
LinkDB
All DBs
Position
9:complement(join(24734059..24734279,24734364..24734538))
Genome browser
AA seq
131 aa
AA seq
DB search
MASGGMKDFYRQKKKGGPTKASSSSKKKTQHYTGGASVGASDTAQTSALISHGNLDLKDD
FSEQEEQLRLFDMDMKFGPCIGVTRLQRWERASAMGLHPPPHLRDLLLNNTHAGNHNNNG
PSLECLWEGKV
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggtggcatgaaggacttttaccggcagaagaagaaaggaggtcccaccaaa
gcatcgtcatcttccaagaagaaaacacagcattacactggaggggcctctgttggggcc
tcagacactgctcagacatcagcactaatttctcatggtaacctagatcttaaagatgat
ttcagtgagcaagaggagcagttgcgactgtttgatatggacatgaagtttggcccttgc
attggcgttactcgtcttcagcgttgggaacgtgcttctgccatgggtcttcacccacca
cctcatctcagggatctcttactgaacaatactcatgcaggcaatcacaataacaatggt
ccctcccttgagtgcctctgggagggcaaagtctag
DBGET
integrated database retrieval system