KEGG   Oryza sativa japonica (Japanese rice): 116435279
Entry
116435279         CDS       T01015                                 
Name
(RefSeq) uncharacterized protein LOC116435279
  KO
K08500  syntaxin of plants SYP6
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    116435279
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    116435279
Membrane trafficking [BR:osa04131]
 SNARE
  SNAP-25[C] (Qc)
   STX6
    116435279
SSDB
Motif
Pfam: STX6_10_61_N SNARE Wtap DUF1664 MIP-T3_C
Other DBs
NCBI-GeneID: 116435279
NCBI-ProteinID: NP_001364311
LinkDB
Position
11:join(3338899..3338952,3339689..3339802,3340050..3340163,3340252..3340409,3340642..3340732,3340908..3340973,3341243..3341353)
AA seq 235 aa
MASAQDPFYIVKDEIQESIEKIQDTLHQWKQTPENTGEHVHLTKEIIASCESIQWQVVEL
EKAISVAERDPAYYGLNEVEIGKRRNWTSTARNQVVSIRRCVEAGKQKSAFGHSVNPSEL
VRSKQHIAQDNDDFIASESDQQMLLIKRQDEELDELSASVQRIGGVGLTIHDELVGQERL
LGELSLDMETTTNRLDFVQKRVAMVLKKASLKGQIMMIAFLVVLFIILFVLVFLT
NT seq 708 nt   +upstreamnt  +downstreamnt
atggcttccgcgcaggatcccttctacatcgtcaaggacgagatccaggagtcgatagaa
aaaattcaagatactttgcatcagtggaagcaaacaccggaaaacactggagaacatgtg
catctgaccaaagaaataatagcaagctgcgaaagtatccagtggcaggtggttgaactg
gagaaagctatttcagttgctgagagagatccagcttactatggacttaacgaggttgaa
ataggaaaaaggaggaactggactagcactgctcgtaaccaggtggtctccataaggcgg
tgtgttgaagctggaaagcaaaagagtgcctttggccattcagtcaatccttctgaatta
gtgaggtccaagcagcacattgctcaagataacgatgacttcattgcttcagaatcagat
cagcagatgctcctgattaagcgacaggatgaggaattggatgagcttagtgctagtgtc
cagcgaattggaggtgttggtctcaccatacatgatgaacttgttggacaggaaagactt
ttgggggagctaagccttgacatggaaactacgaccaataggctcgactttgtgcagaaa
agggtggccatggtcctgaagaaggccagcttgaaaggccagattatgatgatagcattc
ttggtggttcttttcatcattcttttcgttttggtgttcttgacttga

KEGG   Oryza sativa japonica (Japanese rice): 4324558
Entry
4324558           CDS       T01015                                 
Name
(RefSeq) syntaxin-61
  KO
K08500  syntaxin of plants SYP6
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    4324558
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4324558
Membrane trafficking [BR:osa04131]
 SNARE
  SNAP-25[C] (Qc)
   STX6
    4324558
SSDB
Motif
Pfam: STX6_10_61_N SNARE DUF6366 MCU
Other DBs
NCBI-GeneID: 4324558
NCBI-ProteinID: XP_015625156
UniProt: Q5JMS0 A0A0P0VD62
LinkDB
Position
1:complement(join(43100213..43100323,43100573..43100638,43100803..43100893,43101150..43101304,43101631..43101744,43101905..43102018,43102907..43102960))
AA seq 234 aa
MSSAQDPFYIVREEIQDSIDKLQTTFHRWEKTPSNTGEHVHLTKELHTSCESIEWQVDEL
EKTILVASRDPAYYGLDEVELSRRRNWIGSARNQVAAVRRSVEKGKSNSTFSAHQDMGTS
RSNHYTAQDNDDFIASESDRQLLLMRQQDEELDELSESVQRIGGVGLTIHEELSGQERIL
NDLSLEMETTSNRLDFVQKRVAMVMKKAGIKGQIMLILFLVVLFIILFVLVFLT
NT seq 705 nt   +upstreamnt  +downstreamnt
atgagctcggcgcaggatccgttctacatcgtccgggaggagatccaggactcgattgat
aagttgcaaactactttccatcgatgggagaaaacaccgtcaaacacaggagaacatgtt
catttgacaaaggagcttcataccagctgtgaaagcattgagtggcaggtggatgagttg
gaaaagacaatcttagttgcatcaagagatccagcgtactatggactggacgaagttgag
ctttctagacgacggaactggattggttctgctcgtaatcaggttgctgcagtcaggaga
tctgttgaaaaggggaagagtaattcaactttctcggcgcaccaagacatgggcacaagc
agaagtaaccactacactgcacaagacaatgatgacttcattgcttcagaatcagataga
cagcttctacttatgaggcagcaggatgaggaacttgatgagcttagcgaaagtgttcaa
aggattggtggtgtagggctaaccatacacgaagagctgtctggacaggaaaggatctta
aacgacctaagcttggagatggaaactacttcaaacagacttgacttcgtgcagaaaaga
gtggcgatggtcatgaaaaaggctggcataaaagggcagattatgctgatcctcttcctt
gtggttctgttcattatacttttcgtgttggtgttcttgacataa

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