KEGG   Oryza sativa japonica (Japanese rice): 4323838
Entry
4323838           CDS       T01015                                 
Name
(RefSeq) transcription initiation factor IIA subunit 2
  KO
K03123  transcription initiation factor TFIIA small subunit
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    4323838
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:osa03021]
    4323838
Transcription machinery [BR:osa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIA
     4323838
SSDB
Motif
Pfam: TFIIA_gamma_N TFIIA_gamma_C
Other DBs
NCBI-GeneID: 4323838
NCBI-ProteinID: XP_015640812
UniProt: Q5JLE4
LinkDB
Position
1:join(43472123..43472251,43472338..43472388,43473290..43473439)
AA seq 109 aa
MATFELYRRSTIGMCLTDTLDDMVSSGALSPELAIQVLVQFDKSMTSALEHQVKSKVTVK
GHLHTYRFCDNVWTFILTDAIFKNEEITETINKVKIVACDSKLLETKEE
NT seq 330 nt   +upstreamnt  +downstreamnt
atggccaccttcgagctgtaccggaggtccaccatcggtatgtgcctcaccgacacgctg
gacgacatggtctccagtggggcgctcagccccgagctcgccatccaagtcctcgtgcag
tttgacaagtccatgactagcgctttggagcatcaggtgaagagcaaggttactgtcaag
ggccatctgcacacctacaggttctgcgacaatgtgtggactttcatcctaacagatgca
attttcaagaacgaagagattacagagacaataaacaaggtgaagatcgtggcctgcgat
tccaaattgctggagactaaagaagagtaa

KEGG   Oryza sativa japonica (Japanese rice): 4337575
Entry
4337575           CDS       T01015                                 
Symbol
TFIIAy, XA5
Name
(RefSeq) transcription initiation factor IIA subunit 2
  KO
K03123  transcription initiation factor TFIIA small subunit
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    4337575 (TFIIAy)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:osa03021]
    4337575 (TFIIAy)
Transcription machinery [BR:osa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIA
     4337575 (TFIIAy)
SSDB
Motif
Pfam: TFIIA_gamma_N TFIIA_gamma_C
Other DBs
NCBI-GeneID: 4337575
NCBI-ProteinID: NP_001389396
LinkDB
Position
5:join(447845..447973,448068..448118,453214..453354)
AA seq 106 aa
MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIK
GHLHTYRFCDNVWTFILTEASFKNEETTEQVGKVKIVACDSKLLSQ
NT seq 321 nt   +upstreamnt  +downstreamnt
atggccaccttcgagctctaccggaggtccaccattggcatgtgcctcactgagacgctc
gacgagatggtctccagcggcaccctcagcccggagctcgccattcaagttcttgtccag
tttgataagtctatgacggaagccttggagaaccaagtcaagagcaaggtttctatcaag
ggccacctgcacacttacaggttctgtgacaatgtatggacattcatcttgactgaagca
tcattcaagaacgaggagactacagaacaagttggcaaggtgaagattgtggcctgtgat
tccaaactactcagccaataa

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