Oryza sativa japonica (Japanese rice) (RefSeq): 4323876
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Entry
4323876 CDS
T01015
Name
(RefSeq) syntaxin-32
KO
K08490
syntaxin 5
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
4323876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4323876
Membrane trafficking [BR:
osa04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
4323876
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
Syntaxin
DUF16
CREPT
Motif
Other DBs
NCBI-GeneID:
4323876
NCBI-ProteinID:
XP_015617756
UniProt:
Q9LGF8
Q0JQ67
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All DBs
Position
1:4117929..4122464
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AA seq
344 aa
AA seq
DB search
MNPGRPAPASFRDRTNEFRAAVESAARYASSSAAAAPSSSSGGGVGGPLDVSRGAASAHS
EFNRRASKIGLGIHQTSQKLARLAKLAKRTSVFDDPTVEIQELTAVIKKDITALNSAVVD
LQVLCNSQNESGNLSKDTTNHSTTVVDNLKNRLMSATKEFKEVLTMRTENLKVHENRRQM
FSSSAANNASNPFVRQRPLVTRDGPESSVPPAPWASDSATTPLFQRKKTNGDHGASSSSS
QPFMQQQLVQQDSYMQSRAEALQNVESTIHELSNIFTQLATMVSQQGELAIRIDENMDDT
LANVEGAQGQLLKYLNSISSNRWLMMKIFFVLMVFLMIFIFFVA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaacccggggcgcccggcgccggcgtcgttccgcgaccgcaccaacgagttccgcgcc
gccgtcgagagcgccgcgcgctacgcctcctcctccgcggcggcggcgcccagcagcagc
agcggcggcggcgttggcggcccgctcgacgtgtcgcggggggcggcctcggcgcactcg
gagttcaaccgccgcgcctccaagatcgggctcgggatccaccagacctcgcagaagctc
gcccgcctcgccaaactggcaaagaggacatctgtttttgatgaccctacggtagagata
caagagctgactgcagttatcaagaaagatatcactgctttgaattctgccgttgtagac
ctacaggttctctgcaattcacaaaatgagagcggcaacctttccaaggatacaacaaat
cattccactacagttgtggacaatctaaaaaatcgcctgatgagcgcaacaaaagaattt
aaggaagttcttaccatgcggacagagaacttgaaagttcatgagaatagaaggcaaatg
ttctcatcatcagctgcgaacaatgcatcaaatccatttgttcgtcaacgtccccttgtt
accagggatggtcctgaatcctctgtacccccggcaccatgggccagtgattctgccact
actccattgtttcagaggaagaagactaatggagatcatggagcatcatcatcatcttct
cagccattcatgcagcagcagttagtacagcaggacagttacatgcagagtagagcggag
gctctccaaaatgttgaatcaaccatccatgagctaagcaacatttttacacaactggca
actatggtttctcagcagggagagctagcaatcagaattgatgagaacatggatgacaca
ctagccaatgttgagggagctcagggccagctactgaagtatctcaacagcatttcatcg
aaccggtggctgatgatgaagatattctttgtgctgatggttttcctcatgatctttata
ttcttcgttgcatga
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integrated database retrieval system
