Oryza sativa japonica (Japanese rice) (RefSeq): 4324305
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Entry
4324305 CDS
T01015
Name
(RefSeq) ABC transporter B family member 20
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
4324305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
osa02000
]
4324305
04147 Exosome [BR:
osa04147
]
4324305
04090 CD molecules [BR:
osa04090
]
4324305
Enzymes [BR:
osa01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
4324305
Transporters [BR:
osa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
4324305
Exosome [BR:
osa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
4324305
CD molecules [BR:
osa04090
]
Proteins
4324305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_15
AAA_16
AAA_22
RsgA_GTPase
AAA_30
DUF87
Motif
Other DBs
NCBI-GeneID:
4324305
NCBI-ProteinID:
XP_015641010
UniProt:
A0A979HL79
Q5JNC4
LinkDB
All DBs
Position
1:complement(43125963..43134527)
Genome browser
AA seq
1397 aa
AA seq
DB search
MVSRGLFGWSPPHVQPLTPVSEASEPPESPSPYAADLAGDAAPPPEDDAAAALDDGDDEP
DPPPAAVPFKRLFACADRLDWALMSAGALAAAAHGVALVVYLHLFGTAIHSLHGRHNHDL
FHHINQHALHFLYIAIGVFFAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYG
NNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFGGLIIGLVNCWQIALLTLATGPFIV
AAGGISNIFLHRLAENIQDAYGEAASVAEQAILYIRTLYSFTNETLAKYSYATSLQATLR
YGILISLVQGLGLGFTYGLAICSCALQLWVGRFLISHGKANGGEVVVALFSIILSGLGLN
QAATNFYSFEQGRIAAYRLYEMISRSTSVVNQDGRTLPSVQGNIEFRNVYFSYLSRPEIP
ILSGFYLTVPARKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRS
QIGLVTQEPALLSLSIRENIAYGRSATTDQIEEAAKTAHAHTFISSLEKGYDTQVGRAGL
SLTEEQKIKLSIARAVLSNPSILLLDEVTGALDFEAEKAVQEALDILMLGRSTIIIARRL
SLIRNADYIAVMEEGQLVEMGTHDELLNLDGLYAELLRCEEAAKLPKRTPIRNYKEPSSF
QIERDSSASHSFQESSSPNMSKSPSLQKTHGFLAFRNSDANHNSHESPNIQSPPSEQMAE
TRLPTVASERAPSIKRQDSFEMKLPDLPKIDVPLHRQSSNTSDPESPISPLLTSDPKNER
SHSKTFSRPLDMFDNFHAEESKKQKTKAPSFWRLVELSLAEYFYALLGSAGAACFGSFNP
LLAYTISLIVVAYYRIGVRDVHDEVNKYCSFIVGMGIITVLANFLQHFYFGIMGEKMTER
VRRMMFSAILRNEVGWFDEEENSADILSMRLANDATFVRAAFSNRLSIFIQDTAAIFVAL
LLGMLLEWRVALVALATLPILVISAVAQKMWLSGFSRGIQEMHRKASLVLEDAVRNIYTV
VAFCAGNKIMELYRLQLGNILWKSLVHGMGIGFAFGLSQFLLFACNALLLWYTAVAVKNG
HLSLVTALKEYIVFSFATFALVEPFGLAPYILKRRKSLTSVFEIIDRAPKIDPDDASGLK
PPNVYGSIEFRNVDFCYPTRPETMVLSNFSLRVNGGQTVAVVGVSGSGKSTIISLIERFY
DPTAGQVLLDGRDLKLFNLRWLRSHMGLVPQDPVIFSTTIRENIIYARHNATESEMKEAA
RIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSAIESE
SSRVVQEALDTLIMGNKTTVLIAHRAAMMKHVDNIVVLNGGKIVEQGTHDSLVQKNGLYV
KLMQPHFTKGFRQRRLI
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atggtttcgcggggcctcttcggctggtccccgccgcacgtccagcctctcactcccgtc
tccgaggcctccgagccgccggaatccccctctccctacgccgctgacctcgccggggac
gccgcgccgcctccggaggatgacgccgccgccgccctcgacgatggggacgacgagccc
gatccgccccccgccgccgtccccttcaagcgcctcttcgcctgcgccgaccgcctcgac
tgggcgctcatgtccgccggcgcccttgccgccgccgcccacggggtggccctcgtcgtc
tacctccacctcttcggcaccgccatccactcgcttcatggccgccacaaccacgacctt
ttccaccacatcaaccagcatgctttacacttcctatatattgccattggcgttttcttt
gcgggatggatagaggtttcatgctggattcttactggggaaaggcagacagcagtgata
agatcaaagtatgtacaagtgttgttaaatcaagacatgagtttctttgatacctatggg
aacaatggtgatattgtcagtcaagtgctgagtgatgtcttactcatccagtctgcgctg
agtgagaaagttgggaactacattcacaacatggctaccttttttggtggtcttatcatc
ggtttggtcaactgttggcaaatagctcttttgacattggctactggtccgttcattgtt
gctgcaggaggaatatcaaatatttttctccacaggcttgcagaaaacattcaggatgcg
tatggtgaagcagcaagcgttgccgaacaggcaatcttatacattaggactttgtactca
ttcacaaatgagaccctcgcaaaatattcttatgctacttcacttcaagcaacactgcgc
tatggaatcctgataagtctggtgcaaggtcttggtcttggatttacatatggccttgcc
atatgttcttgtgccttacaactttgggttgggaggttccttatatctcatggaaaagct
aatggtggtgaagttgtagtagccctgttttctattatcctgagtggcctgggacttaat
caagcagcaacaaacttctattcttttgaacaaggacgtatagctgcatacaggctctat
gaaatgattagccgttcaacctctgttgtaaaccaggatggccgtaccttaccttcagtg
caaggcaacattgagttccgcaatgtctacttcagttatctatcccgcccagaaatcccc
attttaagtggtttctaccttactgtacctgctagaaagactgtcgctcttgttggcaga
aatggttcagggaaaagcagcattattcctctcatggaacgtttctatgatccaacttta
ggtgaagtgcttttggatggagagaatataaagaacctgaagttagagtggttaagaagc
cagataggacttgtgacccaggaaccggctttattgagcttgagcatcagggaaaatatt
gcatatggaagatctgccacaactgaccagattgaggaggcagcaaagacagctcatgca
catactttcatcagttcacttgaaaaaggatatgatactcaggttggtcgggctggcctt
tcactgacagaagaacaaaagataaagctctccattgctcgtgctgtgctttcaaatcca
tcaattcttttactggatgaggttactggtgctcttgattttgaggctgagaaagctgtt
caggaagcactagatattctgatgcttggtaggtctaccatcatcatagctagacgcctc
agtcttatcaggaatgctgattatatagctgtaatggaggaaggtcagcttgttgagatg
ggaacacatgatgagttgttaaatctggatggcctttatgcagaactacttaggtgtgaa
gaagcagcaaaacttccaaagcggactccgataagaaactacaaagagcctagctccttc
caaattgaaagggattcttcagcaagtcacagcttccaagagtcatcatctcctaatatg
tcaaagtcgccgtcacttcagaaaacacacggttttcttgcattccgtaattcagatgca
aatcataactcacacgaatcaccaaatattcaaagccctccttccgaacaaatggcagaa
actaggttacctacagttgcttctgagagagctccatccatcaaaaggcaggacagtttt
gaaatgaaattgcccgatcttcccaaaattgatgtcccactacaccgacaatcttcaaat
acttcagatccagaatcaccaatatcaccactattgacttctgatccaaagaatgagcgc
tcgcactcaaaaactttcagtcgtcctcttgatatgtttgacaattttcatgctgaggag
tcaaagaagcagaaaacaaaagctccatcgttttggaggcttgtagaacttagtcttgct
gagtatttttatgctctattagggagtgctggtgctgcttgctttggttcatttaatcct
cttcttgcttatacaatatctttaatagtggtggcatactatagaattggtgtacgtgat
gtgcatgatgaagtcaataagtactgctcattcattgttggcatgggtataataaccgtg
ctagctaacttcttacagcacttctattttggtataatgggagagaagatgactgaacgt
gttagaaggatgatgttttcagcaattttgcgcaatgaagtagggtggtttgatgaagaa
gaaaacagtgcagacatattatcaatgcgactcgcaaatgatgctacttttgttcgtgct
gctttcagcaacaggctttctatattcattcaggatacagcagccatttttgtggcactt
cttcttggcatgttgctagaatggcgtgttgctctggttgccctggcaactttgcccatc
cttgtaatttctgcagttgcgcagaaaatgtggctttctggcttttcaagaggaattcag
gagatgcacaggaaggcttctttggttcttgaggatgcagtcaggaatatctatactgtt
gtggcattttgtgctggtaacaaaataatggaactttacagactgcagcttgggaatatt
ctttggaaaagcttggttcatggaatgggtattggttttgcctttggcttatctcagttc
cttcttttcgcctgcaatgcacttctgctgtggtatacagccgtagctgttaagaatggg
caccttagtctggtaacagcacttaaagagtacattgtcttctcttttgcgacttttgca
ctggtggagccatttggccttgcgccatatattctcaagcgtcgaaaatctctgacgtcg
gtatttgaaattattgatcgtgcacccaagattgatccagatgatgcaagtgggctaaaa
ccccccaatgtctatggtagcattgaattcaggaatgttgatttttgctatcctacacgc
cctgagacgatggttttgagtaatttcagccttagagtcaatggaggacaaactgttgct
gtggtaggtgtatctggatcagggaagagcacgataatttctttgatagagagattctat
gatccaaccgccgggcaagttttattggatggccgtgatctgaagctgttcaacttgaga
tggttgcggagccacatgggtttagttcctcaagacccagttatattctccacaaccata
agggagaacataatctatgcaaggcacaatgcaacagagtctgagatgaaagaggcggct
aggattgcgaacgctcaccatttcattagcagtttgccacatggctatgacacacatgtg
ggaatgaggggagtggatttaactcctgggcagaagcagcgaatcgccattgcccgtgta
gtgctgaagaatgcacccattttgctgcttgacgaagccagttctgcaattgaatccgag
tccagtagagtggtgcaggaggccctcgacacattgattatggggaataagacgacagtt
ctcattgcacatagggcggcaatgatgaagcatgtggataacattgttgttctgaatggt
ggaaagatagttgagcagggaacgcatgattcactggtgcaaaagaatgggttgtatgtc
aagttgatgcaacctcatttcaccaaaggattccgtcaacgtagactaatataa
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integrated database retrieval system
