KEGG   Oryza sativa japonica (Japanese rice): 4324412
Entry
4324412           CDS       T01015                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
  KO
K13098  RNA-binding protein FUS
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03015  mRNA surveillance pathway
osa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4324412
  09122 Translation
   03015 mRNA surveillance pathway
    4324412
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:osa03041]
    4324412
Spliceosome [BR:osa03041]
 Complex A
  Other components
   Complex A specific factors
    4324412
SSDB
Motif
Pfam: RRM_1 Zn_ribbon_RanBP
Other DBs
NCBI-GeneID: 4324412
NCBI-ProteinID: XP_015620896
LinkDB
Position
1:join(3331497..3331548,3331627..3331897,3332546..3333413,3334169..3334319,3334405..3334483,3335491..3335599)
AA seq 509 aa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NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcggggtcgtacggatccgacgactaccgcggcggctacggcggccgaggtggcggc
ggaggcggccgtgggaggggaggtggcggaggaggagggggaggatatggtggtggtggt
gtgggaggtggatatggtggtggtggcggaggatatggcggcggtggcggagggtacggc
ggcggtggtagaggtggcggtggaggaggaggctacggcggcggtggcggcggcgggaga
ggtgggggtgggggtggcggtggccgaggtggcggcgggaggggtggaggacgtgacggt
gactgggtttgcccagacccgagttgtggcaatgtgaactttgcaaggaggactgaatgc
aacaagtgtggagcaccttctcctgctggaggtggaggtggaggtggaggtggagggtat
aataaatctggtggagggggtggaggctacaatcgtggtggtggcgattttagttctgga
ggtggcggtggctacaacagaggtggaggagattacaactctggtggccgtggtggtggc
actggagggggaggaagaggaggaggttacaatagaggtggtggcgatgatcgtggattt
gatgaccaccgtggtggcaggggtggttatgggggaagagaccaagggaacaaccaaagg
ggagacgaaagtggttatgacgctggtagctatggacaagttcctcctcaaggtcctcct
tcctatggtgggcctggtggtgactatgcagcacctccaagctcctatggaggcaataat
gcatacaattcagattctgcagtgccacctcctagtagctatggtggtggtccaggttca
tatccaccaagttatggtgcaccacctccgaacccgccatatagcggtggtgctccaggt
ggccaaggtagcctacctccttcatatgatggtgggtatggtggtcggcctatgcctggg
ggtggaggccctggtgcacctccaccctatcatggtggtggtggtggtggtggtggcggc
ggcggtggcggcggatacactggcagtgctgctccagagccagctgcaaaggttaagcag
tgtgatgcaaactgtgatgagacttgtgataatgcaagaatttacatctccaacttacct
cctgatgtgactgttgaggaactgcaagaactatttggaggaatcggccaggttggaagg
atcaagcagaaacgtggctacaaagaccagtggccctggaacataaagatctatactgat
gactctggaaagaataaaggagatgcctgccttgcctatgaagatccttctgctgctcat
tcagctggtggattctataacaattatgaaatgagaggctataaaattagtgttgcgatg
gctgagaaatcagctcctagagctcctgcatatggtcatggaggtggacgtggtggctat
ggtggaggtcgcagggataacttcagagatggaggaggccatgggcctaacaggcatcaa
ggtggtggttcgcgttcaaggccatactga

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