Oryza sativa japonica (Japanese rice): 4324412
Help
Entry
4324412 CDS
T01015
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
KO
K13098
RNA-binding protein FUS
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03015
mRNA surveillance pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4324412
09122 Translation
03015 mRNA surveillance pathway
4324412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4324412
Spliceosome [BR:
osa03041
]
Complex A
Other components
Complex A specific factors
4324412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
4324412
NCBI-ProteinID:
XP_015620896
LinkDB
All DBs
Position
1:join(3331497..3331548,3331627..3331897,3332546..3333413,3334169..3334319,3334405..3334483,3335491..3335599)
Genome browser
AA seq
509 aa
AA seq
DB search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NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggtcgtacggatccgacgactaccgcggcggctacggcggccgaggtggcggc
ggaggcggccgtgggaggggaggtggcggaggaggagggggaggatatggtggtggtggt
gtgggaggtggatatggtggtggtggcggaggatatggcggcggtggcggagggtacggc
ggcggtggtagaggtggcggtggaggaggaggctacggcggcggtggcggcggcgggaga
ggtgggggtgggggtggcggtggccgaggtggcggcgggaggggtggaggacgtgacggt
gactgggtttgcccagacccgagttgtggcaatgtgaactttgcaaggaggactgaatgc
aacaagtgtggagcaccttctcctgctggaggtggaggtggaggtggaggtggagggtat
aataaatctggtggagggggtggaggctacaatcgtggtggtggcgattttagttctgga
ggtggcggtggctacaacagaggtggaggagattacaactctggtggccgtggtggtggc
actggagggggaggaagaggaggaggttacaatagaggtggtggcgatgatcgtggattt
gatgaccaccgtggtggcaggggtggttatgggggaagagaccaagggaacaaccaaagg
ggagacgaaagtggttatgacgctggtagctatggacaagttcctcctcaaggtcctcct
tcctatggtgggcctggtggtgactatgcagcacctccaagctcctatggaggcaataat
gcatacaattcagattctgcagtgccacctcctagtagctatggtggtggtccaggttca
tatccaccaagttatggtgcaccacctccgaacccgccatatagcggtggtgctccaggt
ggccaaggtagcctacctccttcatatgatggtgggtatggtggtcggcctatgcctggg
ggtggaggccctggtgcacctccaccctatcatggtggtggtggtggtggtggtggcggc
ggcggtggcggcggatacactggcagtgctgctccagagccagctgcaaaggttaagcag
tgtgatgcaaactgtgatgagacttgtgataatgcaagaatttacatctccaacttacct
cctgatgtgactgttgaggaactgcaagaactatttggaggaatcggccaggttggaagg
atcaagcagaaacgtggctacaaagaccagtggccctggaacataaagatctatactgat
gactctggaaagaataaaggagatgcctgccttgcctatgaagatccttctgctgctcat
tcagctggtggattctataacaattatgaaatgagaggctataaaattagtgttgcgatg
gctgagaaatcagctcctagagctcctgcatatggtcatggaggtggacgtggtggctat
ggtggaggtcgcagggataacttcagagatggaggaggccatgggcctaacaggcatcaa
ggtggtggttcgcgttcaaggccatactga
DBGET
integrated database retrieval system
