Oryza sativa japonica (Japanese rice): 4324443
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Entry
4324443 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K28527
splicing factor YJU2
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4324443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4324443
Spliceosome [BR:
osa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
4324443
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Saf4_Yju2
Benyvirus_14KDa
Motif
Other DBs
NCBI-GeneID:
4324443
NCBI-ProteinID:
XP_015634399
UniProt:
Q0JLM7
A0A0P0V4N1
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All DBs
Position
1:join(23506118..23506315,23507258..23507407,23507502..23507636,23507737..23507802,23509342..23509407,23509527..23509616,23510237..23510318,23510526..23510731)
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AA seq
330 aa
AA seq
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MGERKVLNKYYPPDFDPSKIPRRRQPKNQQIKVRMMLPMSIRCGTCGTYIYKGTKFNSRK
EDVEGEKYLGIQIFRFYFKCTKCSAEITFKTDPQNSDYTVESGASRNFEPWREEDEVADR
EKRKRDEEEMGDAMRALENRAMDSKQDMDILAALEEMRSMKSRHAGVTVDQMLEILKRSA
HDKEEKTVAELDEEDEKLIKSITFRNSQDYVKRIEDDDDDDEDLVIPGQSSSTSKMNGSS
QSVSNATDVLTKTSGSDNANKEGNKIWPSKMPKFIVKPKSTPTDPIKKQKTETTAGPDTG
KAPVAEENSEPAQNNVLQSLCQNYDSDESE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagcgcaaggtgctgaacaagtactaccctccggacttcgacccgtcgaagatc
ccgcggcggcggcagcccaagaaccagcagatcaaggtgcgcatgatgctccccatgagc
atccgctgcggcacctgcggcacctacatctacaagggcaccaagttcaactcgcgcaag
gaggacgtcgaaggcgagaaatacctggggatacaaatatttaggttttacttcaagtgt
acgaaatgttcagctgagataactttcaaaacggaccctcagaattctgattacacggtg
gaatctggggctagtcgcaattttgaaccttggcgtgaagaagatgaggtagcagacaga
gaaaagaggaaacgagatgaagaggagatgggtgatgcaatgagagcattggagaataga
gcaatggattcaaagcaggacatggatatacttgctgctttagaagagatgcgatccatg
aagtctagacatgctggagtcacagttgaccagatgcttgaaattttgaagcgctctgct
catgataaggaggagaaaacagtagctgagctagatgaagaagatgaaaaacttatcaaa
tcaatcacttttcgaaactcccaagattatgtaaaacggatagaggatgatgatgacgat
gatgaagatttggtgataccgggccagtcgagtagcacatcaaagatgaatggatcctcc
cagtcagtatcaaatgcaacagatgtcctgaccaagactagtggatctgataatgccaat
aaagaaggaaataagatctggccatctaagatgccaaaatttatagtcaagccaaagtct
acccctacagatcctatcaagaaacagaagacggaaaccacggctggcccggatactggc
aaagcgccagtcgcagaagaaaatagtgagcctgcgcagaacaatgtcctccaatccctc
tgccaaaactacgatagcgatgaaagtgagtga
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