Oryza sativa japonica (Japanese rice) (RefSeq): 4324471
Help
Entry
4324471 CDS
T01015
Name
(RefSeq) ABC transporter D family member 1
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa02010
ABC transporters
osa04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
4324471
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
4324471
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
osa02000
]
4324471
Enzymes [BR:
osa01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
4324471
Transporters [BR:
osa02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
4324471
BRITE hierarchy
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
AAA_23
AAA_16
SMC_N
Mg_chelatase
AAA_30
AAA_7
Motif
Other DBs
NCBI-GeneID:
4324471
NCBI-ProteinID:
XP_015649181
LinkDB
All DBs
Position
1:42600499..42612379
Genome browser
AA seq
1325 aa
AA seq
DB search
MPSLQLLQLTEHGRNLLSSRRRTLAVVSGALLAGGTLAYAHSARRQKRQEEYSHSDASTQ
TTGNQSICQNGVDGKLVKTRKKKNGLKSLQFLAAILLKKIGPNGINHLLGLMITAVLRTA
VGHRLAKVQGYLFRVAFLRRVPTFTRLIIENLLLCFLQSTIYQTSKYLTGSLGLHFKKIL
TDLVHADYFENMVYYKLSHVDHRISNPEQRIASDIPKFCSELSGLVQDDLTAVADGLIYI
WRLCSYASPKYVLWILAYVLGAGGAIRKFSPAFGKLKSMEQQLEGEYRQVHSRLRTHAES
VAFYGGENREASHIMQRFQALVKHLNVVLHENWWFGMIQDFLLKYLGATVGVILIVEPFF
AGNLKPESSTLGRAEMLSNLRYHTSVIISLFQSLGTLSISSRRLNLLSGYADRIRELLDV
SRELSGVRDLSMNKKSSVDNYISEANYIEFSGVKVVTPSGNVLVDDLTLRVESGSNLLIT
GPNGSGKSSLFRVLGGLWPLMSGHIVKPGVGSNLNKEIFYVPQRPYTAVGTLRDQLIYPL
TADQETEPLSYGGMVDLLKNVDLEYLLERYPLDKEVNWGDELSLGEQQRLGMARLFYHRP
KFAILDECTSAVTTDMEERFCKRVQAMGTSCITISHRPALVAFHDIVLSLDGEGGWTVQE
NRNGSFISAEPEFDALNSSETDRKSDALAVQRAFIANTKGNALMGPKDHSYSTQLIATSP
NMEIEHTERSNLVPQLQCSPRPLPLRAAAMSKILVPKLFDKQGGQLLAVALLVFSRTWIS
DRIASLNGTSVKYVLEQDKAAFLRLIGISVLQSAANSIVSPSLRNLTSKIALGWRIRMTN
HLLQYYLKRNAFYKVFNMSGIDIDADQRITHDVEKLTNDLAGLVTGMVKPLVDILWFTWR
MKILSGRRGVAILYAYMLLGLGFLRAVSPDFGDLANQEQELEGTFRFMHSRLRTHAESIA
FFGGGSREKAMVEAKFTTMLNHSRTLLRKRWLYGIFDDFVTKQLPHNVTWGLSLLYALEH
KGDRALTSTQGELAHALRFLASVVSQSFIAFGDILELHKKFLELSGGINRVFELEELLQT
SQSNAAMPSNPIIAASEEIISFHDVDIVTPSQKLLATQLSCDVSQGKSLLVTGPNGSGKS
SIFRVLRGLWPIASGRLTMPSDGIFHVPQRPYTCLGTLRDQIIYPLSHEEAELKVLSLYK
SGDKAITSGSLDDHLKTILENVRLVYLLEREGWDATPNWEDILSLGEQQRLGMARLFFHC
PKFGILDECTNATSVDVEEHLYKIATSMGITVITSSQRPALIPFHSLELKLIDGEGKWEL
CTINQ
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgccatctcttcagttattgcaactgacagagcacggacgcaaccttttgtcttcgaga
aggagaactcttgcagttgtttctggtgcgttacttgcgggtggaactttagcatatgct
cactcagctcggcgccaaaaacgtcaggaagaatattctcatagtgatgcaagtacacag
accacgggtaatcagagcatttgtcaaaatggtgttgatggtaaattggtaaaaacaagg
aaaaagaaaaatgggttgaaatccttacaatttctggctgctattttgcttaaaaagatt
ggtccaaatggaataaatcatcttctcggcttgatgataacagctgtgttacgtactgcc
gttggccacagattagcaaaagttcagggctatctattcagggttgcatttcttcggcgt
gttccaacctttacacgcctgattatcgaaaatcttcttttatgcttccttcagtccaca
atatatcagacctccaagtacttgacagggtccttaggtttgcactttaagaagattttg
acagatcttgtccatgctgattactttgagaacatggtttactacaaactctcgcatgta
gatcaccggatctcaaatccagaacaaaggattgctagtgatattcctaagttctgctcg
gaactaagtggactcgtacaggatgatctgactgcagttgcagatgggttaatatacatc
tggcgcctctgctcttatgcaagtccaaaatatgttctctggattctggcatatgtactt
ggtgctggtggtgcaattagaaagttttctcctgcttttgggaaattaaaatccatggag
caacagctagaaggggaatatcggcaggtccattcacgtttgagaacccatgctgagagt
gtggcgttttatggtggtgagaacagagaagcatcgcacatcatgcagaggtttcaggct
cttgtgaagcatttgaatgttgttcttcatgaaaactggtggtttggcatgattcaggat
tttcttcttaagtatcttggtgccaccgttggagttatcttgattgttgaacctttcttt
gctggaaaccttaaacctgaatcatccactttaggacgggcagagatgttgagcaatctt
cggtatcatactagcgtcataatatcattatttcagtctcttggaaccctttctatcagt
tcaagacgcttgaatcttctcagtggctatgcagatcgtattcgcgagttactggatgtt
tcacgtgagctatctggggttcgtgatctatctatgaataaaaaatcttctgtagacaat
tatatcagcgaagcaaattatatagaattttcgggtgttaaggtggtgacaccctcaggg
aacgtcttggttgatgatttaactcttcgggtagagtcgggttctaatcttttgataact
ggtcctaatggtagtggaaaaagctcccttttccgggttcttgggggactgtggccactt
atgtcaggccacattgtgaaacctggtgttggctctaatcttaacaaagaaattttttat
gttccccagcgaccatatacagccgttggaacacttcgggaccagcttatctatccactt
acagcagaccaggaaactgaaccacttagctatggtggcatggtggatcttctaaagaat
gtggatctggaatatttgctagaacgctaccctcttgataaggaagttaactggggtgat
gaattgtctcttggagagcaacaaagattgggaatggcccggctgttctaccataggcca
aagtttgccatcctggatgaatgcactagtgctgtgacaactgatatggaagagcgtttc
tgcaaaagggttcaagcaatgggcacatcatgcataacaatctctcatcgtccagcatta
gttgcatttcatgacatcgttttgtctttggatggagaaggagggtggacagttcaggaa
aatagaaatggctcctttatctctgctgaaccagagtttgatgcattgaactcatcagaa
actgatcgtaaatctgatgcacttgctgttcaaagggcttttattgccaacacaaagggt
aatgctttaatgggccccaaggatcattcttattctacacagctcatagccacttctccc
aatatggaaatagaacacacagaacggtcaaatctagttccacaattacagtgctcacca
agacctttgccactccgagctgctgcaatgtcaaaaatactggtccctaaattatttgat
aagcaaggtgggcagttgcttgcagtggcattgcttgttttctctcggacttggatttca
gatcgtatagcttcactgaacggaacgagcgttaagtatgtcctggagcaggacaaagct
gccttccttcggttaattgggattagtgtgctgcaaagtgctgcaaattcaattgtgtca
ccatcactaagaaaccttacttcaaagattgcccttggctggcgaattcgcatgaccaac
catctacttcaatattatttgaaacgaaatgctttttacaaggtatttaacatgtcaggc
atcgatattgatgcagaccaaagaatcacacatgatgtggagaagttgaccaatgatctt
gctggcctagttaccggaatggtgaaaccacttgttgacattctttggtttacatggaga
atgaagattttgtcagggcgaaggggagttgctattttgtacgcatacatgttgctaggt
cttggttttctaagagctgtttcccctgactttggtgatcttgcaaatcaagaacaagaa
cttgaaggaacattcaggttcatgcactcaagattgcggacacatgctgagtcaatagct
ttctttggtggtggatcaagggaaaaagctatggttgaagctaaattcacaacgatgctt
aaccactcaaggactcttctgagaaaaagatggctatatggtatttttgatgatttcgtg
acgaagcagctacctcacaatgtgacatgggggcttagtttgttatatgctttggaacac
aagggggaccgagctttgacttcaactcaaggagagttggcacatgcacttcgattcttg
gcatctgtggtgtcacaaagctttatagcttttggtgatattcttgagttacataaaaaa
ttccttgaactgtccggtggtattaatagggtgtttgaactcgaagagcttctacagaca
tctcaaagcaatgctgccatgccctctaatcctattattgcggcatcggaagaaattatt
tccttccatgatgtggatatcgtaacgccatctcaaaagctattggctacccagttatct
tgtgatgtatctcaaggaaaaagccttcttgtgactggcccaaatggcagtggcaagagc
tccatttttagggtgctccgaggtttgtggcccatcgcttcagggaggcttaccatgccg
tctgatggcatctttcatgttccgcaacgtccgtatacttgtctaggaaccttgagggat
cagatcatatatcccctctctcatgaggaggcagagttgaaggttctttcattatacaaa
tcaggtgacaaggcaataacttctgggtcactggatgatcacctgaagacaattctagag
aatgttcgattggtctatcttctagaaagagaagggtgggatgctactcctaactgggaa
gatattctatccttgggagaacagcagaggctaggcatggctcgtttgttcttccactgt
ccaaaatttggtatcctagacgagtgcaccaatgccacaagtgtcgatgttgaggagcat
ttgtacaagatagcaactagtatgggcataactgtcatcacctcgtcacaaaggcctgct
ctgatacccttccattcgttggagctgaaactcatcgatggtgaaggaaagtgggaacta
tgtacaatcaaccaataa
Oryza sativa japonica (Japanese rice) (RefSeq): 4337574
Help
Entry
4337574 CDS
T01015
Name
(RefSeq) ABC transporter D family member 1
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa02010
ABC transporters
osa04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
4337574
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
4337574
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
osa02000
]
4337574
Enzymes [BR:
osa01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
4337574
Transporters [BR:
osa02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
4337574
BRITE hierarchy
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
AAA_23
AAA_16
SMC_N
AAA_7
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
4337574
NCBI-ProteinID:
XP_015640039
UniProt:
B9FM21
LinkDB
All DBs
Position
5:complement(421218..432990)
Genome browser
AA seq
1321 aa
AA seq
DB search
MPSLQLLQLTERGRGLLASRRKTLAVVSGALLAGGALAYARSSQGQRRRRSEGDDATTAL
ARNGDRMGQNGVDGRLAGTKRRKGGLRSLHFLAAILLKKIGPNGTRYLLGLTLTAVLRTA
VGHRLARVQGYLFRAAFLRRVPTFTRLIIENLILCFLQSAVYQTSKYLTGSLSLRFKKIL
TDLVHADYFQNMVYYKISHVDHRISNPEQRIASDIPKFCSELSELVQDDLAAVAEGLIYT
WRLCSYASPKYMLWIVGYILVAGGAIRNFSPAFGKLKSTEQQLEGDYRQLHSRLRTHAES
VAFYGGENREAYYIMQRFQALIGHLNCVLHENWWFGMIQDFFLKYFGATVAVVLIIEPFF
SGHLRPDSSTLGRAEMLSNLRYHTSVIISLFQSLGILSISTRRLNILSGYADRIRELLDV
SRELSGVRDKSLNHNSSAGNYISEANHIEFSGVKVVTPASNVLVDDLTLRVERGSNLLIT
GPNGSGKSSLFRVLGGLWPLVSGHIVKPGVGSDLNKEIFYVPQRPYTAVGTLREQLIYPL
TADQEIEPLSYDGMVDLLKNVDLEYLLERYPLDKEVNWGDELSLGEQQRLGMARLFYHKP
KFAILDECTSAVTIDMEERFCKKVRAMGTSCITISHRPALVAFHDIVLSLDGEGGWDVQH
RRDDSSFSTEESDYTLLETDRKSDALTVQRAFMGRAKSNASSRSKEHCYTTKVIATSPKL
EIEQTIQTHRVPHLRCFPRPLPARVAAMVKILVPKLLDKQGGQLLAVALLVFSRTWISDR
IASLNGTTVKFVLEQDKAAFIRLIGISVLQSSANSFVAPSLRTLTGRLALGWRIRLTNHL
LQYYLKRNAFYKVFNMSGKSIDADQRLTLDVDKLTTDLAGLVTGMVKPLVDILWFTWRMK
LLSGRRGVAILYAYMLLGLGFLRAVSPDFGHLAGQEQELEGTFRFMHSRLRTHAESIAFF
GGGSREKAIVEAKFMKLLDHSKILLRKQWLYGIVDDFVTKQLPHNVTWGLSLLYALEHKG
DRALTSTQGELAHALRFLASVVSQSFIAFGDILDLHKKFLELSGGINRIFELEELLRVSQ
RDTFVPSDATSAEETISFHEVDIVTPSQKLLASKLSCNVVQGKSLLLTGPNGSGKSSIFR
VLRDLWPVCSGRVTKPSDGMFHVPQRPYTSLGTLRDQIIYPLSREEAEMKICSLYNDGNG
SSASNLLDDHLKTILVNVRLVYLLEREGWDSTSNWEDVLSLGEQQRLGMARLFFHHPKFG
ILDECTNATSVDVEEHLYKLATSMGITVITSSQRPALIPFHSLELKLIDGEGNWELCEIH
Q
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgccatccctgcagctgctgcagttgacggagcgtggccggggactcttggcctcaagg
aggaaaactcttgcggttgtttctggcgcgctgcttgccggaggagctttggcgtatgca
cgctcaagccaaggccaacggagaaggcgttcagagggtgacgatgccaccactgcattg
gccaggaatggggacaggatgggccaaaatggtgtggatggtagattggccggaacaaag
cgaagaaaaggtggcctcagatctcttcatttccttgctgccatcctactgaagaagatt
ggaccaaatggcacccgctaccttcttggcttgacgttaactgcggtgttacgtactgct
gtgggacatagattagcaagagtccaaggctatttgtttagggcagcatttcttcggcgt
gttccaacctttacacgcctaatcatcgaaaacctaatcttatgctttcttcaatccgcc
gtataccagacctcaaaatacttaacagggtctttgagtctgcgcttcaagaaaattttg
acagatcttgtccatgctgattattttcagaatatggtttactacaaaatttcacatgtg
gatcatcgaatatcaaacccagagcaaaggattgctagtgatattccaaagttctgttct
gaactaagtgaacttgtacaggatgatctagctgcagttgcagaaggattaatatacacc
tggcgtctctgttcttatgcaagtccaaaatacatgctctggattgtgggatatatacta
gttgcgggtggagcaattagaaatttctcccctgctttcggaaagctgaaatccacagaa
cagcaactcgaaggagattatcgtcagcttcattcacgattaagaactcatgctgagagt
gtggcattttatggtggtgagaacagagaagcatattatatcatgcagcgtttccaggct
cttattgggcacctgaattgtgtactccatgaaaactggtggttcggcatgattcaagat
ttctttctgaagtattttggtgcaactgtagcagttgtcctcattattgaacctttcttc
tctggccacctcagacctgattcatccacacttggaagggctgaaatgttaagtaatctt
cgataccacacaagcgtaatcatatcactgtttcagtctcttgggatcctatctataagc
acaagacgtttaaatattctaagtggctatgcagaccgcattcgtgagttactggatgtt
tcacgtgaactgtctggggttcgtgataaatcgttaaatcataattcctctgctggaaat
tatatcagtgaagcaaaccatatcgaattctcgggtgttaaggtggtgacgcctgctagc
aatgtcttggttgatgatttaactctccgagtagaaaggggttctaatcttttgatcact
ggtccgaatggtagcggaaaaagttctctttttcgggtccttggaggcttatggccatta
gtttctggtcatattgtcaaaccgggtgttggctctgatcttaataaggaaattttctat
gtcccgcaaagaccatacacagctgttggtacacttcgtgaacagctaatttatcctctt
acagcagatcaggagattgaaccccttagctacgatggcatggtggaccttctaaagaat
gttgacttggaatacttgctagaacgctatcctcttgataaggaagttaactggggtgat
gaattgtcccttggtgagcaacaaagattaggaatggcaaggttattctaccataaacca
aagttcgccatccttgatgagtgtactagcgctgtgacaattgatatggaagaacgcttt
tgcaaaaaggttcgagcaatgggaacatcatgcataacgatatctcatcgcccagcttta
gttgcgtttcatgacattgttttgtctttggatggtgaaggagggtgggatgtccagcac
agaagggatgactcatccttttctactgaagagtctgactatacattattggaaactgat
cgtaaatctgatgcgcttactgttcaaagggcatttatgggcagggcaaagagcaatgct
tcatcaaggtccaaagaacattgctacactacaaaggttatagcaacttctcccaagttg
gaaatagaacaaacaatacaaacacatagagtcccgcatttacggtgcttcccaaggcct
ctgcctgccagagtagctgcaatggtcaaaatattggttcctaagctacttgacaaacaa
ggagggcagttgcttgctgttgcactacttgttttctctcgaacttggatctcagaccga
attgcttcactgaatgggacaactgttaagtttgtcttggagcaggacaaagctgcattt
attcgtctgattggtatcagtgtcctgcaaagttctgcaaattcttttgtggccccatct
ttgagaacccttactggaagacttgcccttggatggcggattcgcctgaccaatcatttg
cttcaatattatttgaaaagaaatgcattctacaaggtattcaacatgtcaggtaaaagt
attgatgcagaccaaagattaacacttgatgtggataaattgaccaccgaccttgctggc
ttagttactggaatggtaaaaccacttgtcgacattctttggtttacatggagaatgaag
cttttgtctgggcgaagaggagttgctatcttgtatgcttacatgctgctaggtttgggc
ttcctgagagctgtatccccagactttggtcatcttgctgggcaagaacaagagcttgaa
ggaactttcaggttcatgcactcgagactgcgaacgcatgctgaatcaattgctttcttt
ggtggtggatcaagagagaaagctattgttgaggctaaattcatgaaattgcttgaccac
tcaaagattctgttgagaaagcagtggctttatggtattgttgatgattttgtaacaaag
caactccctcacaatgtaacatggggtcttagtttgttatatgctctagagcacaagggt
gacagagctttgacttcaactcaaggagagttggcacatgctctgcggttcttggcatct
gttgtgtcacaaagtttcatagcctttggtgacattcttgacttacacaaaaagttcctt
gaactttctggtgggattaaccggatttttgagcttgaggagcttcttcgtgtatctcaa
agggatacttttgtgccttccgatgccactagtgcagaagaaaccatttcatttcacgaa
gtggatattgtaacaccatcgcagaaactgttggctagcaagctgtcgtgcaatgtggta
caagggaaaagccttcttctgactggccccaacggtagtggaaagagctctattttcaga
gttctgagagatttatggccagtgtgttctgggagagttaccaaaccttcagatgggatg
tttcatgttcctcagcgtccatataccagcttgggtactctgagagatcagatcatatac
cctctctcaagggaggaagcagagatgaagatttgttcgttatacaatgatggtaacggg
tctagtgcttctaatctgctggatgatcacctgaagacaattctagtgaatgttcggttg
gtctatcttctagaaagagaaggatgggactcaacttcaaactgggaagatgttttatcg
ttgggagaacagcagaggcttgggatggcccgtttgtttttccaccatcctaaatttggt
attcttgacgaatgcacgaatgctacaagcgttgatgttgaagagcatttgtacaagcta
gcaactagcatgggcatcactgtgattacttcctcgcaaaggccagctttgatccccttc
cattccttggagctgaaactcatcgacggagaaggaaactgggagctatgcgagatccac
caatga
DBGET
integrated database retrieval system
