KEGG   Oryza sativa japonica (Japanese rice): 4324524
Entry
4324524           CDS       T01015                                 
Name
(RefSeq) inner membrane protein PPF-1, chloroplastic isoform X1
  KO
K03217  YidC/Oxa1 family membrane protein insertase
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03060  Protein export
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    4324524
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:osa03029]
    4324524
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:osa02044]
    4324524
Mitochondrial biogenesis [BR:osa03029]
 Mitochondrial quality control factors
  Mitochondrial respiratory chain complex assembly factors
   Complex-IV assembly factors
    4324524
Secretion system [BR:osa02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   4324524
SSDB
Motif
Pfam: 60KD_IMP
Other DBs
NCBI-GeneID: 4324524
NCBI-ProteinID: XP_015640568
LinkDB
Position
1:join(2778270..2778635,2779057..2779167,2779259..2779333,2779541..2779601,2779828..2779901,2779979..2780083,2780450..2780557,2780656..2780759,2780914..2781063,2781138..2781261,2781410..2781514)
AA seq 460 aa
MAKALLSSSLLPSLQPRAAAARLPMLTLPSLRRHGGRRASACRVRASLHGLDSIAGLDLH
AALERAEAALYTLADAAVVAADAAAGGGGGGGGGGGEAAASVAQKNGGWFGFISEALEVV
LKVLKDGLSAVHVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPQIKAIQQRY
AGNQERIQLETARLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIP
SLGGPTTIAARQSGAGISWLLPFVDGHPPLGWHDTICYLVLPVLLVASQFVSMEIMKPPQ
TDDPSQKNTLLVLKFLPFMIGWFSLSVPSGLSIYWFTNNILSTAQQVWLRKLGGAKPVVN
QGGSGIITAGRAKRTSAQPAQPGERFKQLKEEESKRKGNKALAAGDSDLSASTSEDEESD
DETTEEQGGPEERYNSSSNKKLPNYSGKKGKRSKRKRMVQ
NT seq 1383 nt   +upstreamnt  +downstreamnt
atggccaaggcgctcctctcctcgtcgctgctcccctcgctgcagccccgcgccgccgcc
gcgaggctgcctatgctgacgctgccttcgctgcggaggcacgggggccgccgcgcgtcg
gcgtgcagggtgagggcgagcctccacgggctcgactcgatcgcggggctcgacctccac
gccgcgctggagcgcgccgaggcggcgctctacacgctcgccgacgccgctgtcgtcgcg
gcggacgcggcggcgggaggaggagggggtggcggtggtggtggcggtgaagcggcggcg
tcggtggcgcagaagaacggggggtggttcgggttcatctccgaggccttggaggtcgtg
cttaaggtgctgaaggatggcctgtcagctgttcatgtgccgtactcttatggattcgcc
atcattcttctcactgttattgtgaaggctgcaacattacctttaacgaaacaacaggtc
gaatcaactctggctatgcagaatttacagccacagatcaaagcaattcaacagagatat
gcaggaaatcaggaaaggatacagcttgagactgctcggttatacaagcaagctggagtc
aaccctctggcaggatgttttccaactttggcaacaatacctgtctggattggcctctac
caagccctttcaaatgtagcaaacgagggattactgacagaaggatttttctggattcca
tctttgggaggccctacaacaattgctgctcggcaaagtggtgctggcatttcttggctc
ttgccttttgtggatggccatcctccattaggctggcatgacacgatatgttatcttgtg
ttgcctgtgctacttgttgcttctcagtttgtctctatggaaatcatgaagccaccccag
actgatgatccatcgcagaagaacacactgcttgttttgaaatttcttccatttatgata
gggtggttctctttgtcagtgccgtcagggttgtccatttattggttcacaaataatatc
ctcagcacagcccagcaagtttggttacggaaactgggaggagcaaagcctgttgtcaat
caggggggtagtgggataattactgcaggacgagcaaaacgtacgagtgctcaaccagcc
caacctggtgaaagatttaaacagctgaaagaagaggagagcaagagaaaaggcaacaaa
gcgcttgctgcaggagattcagatctttcagcctcaacatcagaggatgaagagtcggat
gatgagactactgaagagcagggaggacctgaggaaagatacaattccagtagcaacaag
aaacttccaaattactccggaaagaagggcaaaagatcaaagaggaagcgcatggttcag
tag

KEGG   Oryza sativa japonica (Japanese rice): 4331399
Entry
4331399           CDS       T01015                                 
Name
(RefSeq) mitochondrial inner membrane protein OXA1-like
  KO
K03217  YidC/Oxa1 family membrane protein insertase
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03060  Protein export
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    4331399
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:osa03029]
    4331399
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:osa02044]
    4331399
Mitochondrial biogenesis [BR:osa03029]
 Mitochondrial quality control factors
  Mitochondrial respiratory chain complex assembly factors
   Complex-IV assembly factors
    4331399
Secretion system [BR:osa02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   4331399
SSDB
Motif
Pfam: 60KD_IMP
Other DBs
NCBI-GeneID: 4331399
NCBI-ProteinID: XP_015628572
UniProt: A0A0P0VS81
LinkDB
Position
3:join(913693..914162,914261..914351,914722..914766,915554..915612,915818..915893,916017..916148,916238..916345,916871..916925,917014..917234)
AA seq 418 aa
MAFSARRSLASGLSRHLSRRLHPSVSHLLPSHHDDHSENPSPPAQPPPLPSALRSPSRSQ
ALGLPLPFGLLHASRRSLSTSPRSNDELDASAEVLSDAASSVSVPADVLADAAASVPVSA
PAPFPGEVAAAAADSFAPVAALQHLIDGVHSLTGLNWWACIALTSLLIRTLTVPLLLNQM
KATVKLNAMRPEIEAINLEMRTSTDPQSMLEGKRKLGELFLRHGVTPLTPLKGLFIQAPI
FMSFFFAISNMVEKVPSFKGGGIYWFTDLTTPDELLILPMLTSLTFLVTVELNMQDGMEG
NPMLKTMKNFSRVMAVLTIPFTMSFPKAIFFYWVTSNLFSLGYGFVLRKPAVRSFLDLPP
IETQFAPAQQPTFNLFGASKSVPAAGSSIAESDRSSSVLSQRFSDLENRAKSRRESQD
NT seq 1257 nt   +upstreamnt  +downstreamnt
atggctttctccgcgcggaggagcctcgcttccggcctctcccgccacctctcccgccgt
ctccacccctccgtctcccacctcctcccctcccaccacgatgaccactccgagaacccc
tcgccccccgcccaacctccgcctctcccctccgcgcttcgctcgccgtcgagatctcag
gcgctcggcctccccctccccttcggcctcctccacgcgtcccgccgcagcctctccacc
tcgccccgctccaacgacgagctcgatgcctccgcggaggtcctctctgacgccgcatct
tcggtctccgtcccggcggacgtcctcgcggacgccgcggcgtctgtacccgtctccgcc
ccggcgccgttccccggggaggtggccgcggcggccgccgactcgtttgcaccggtcgcc
gccctgcagcacctcatcgacggcgtccattccttgacggggctgaactggtgggcttgt
attgcgctcacgtcactgttgatccggacgctaactgtcccactgctgctgaaccagatg
aaggctacggtgaagctaaatgcaatgcggccagaaattgaagccattaatttggagatg
cgaacttcaactgatcctcagtcaatgctagaggggaaaaggaaattgggcgagctattt
ctaaggcatggcgtaactccactgacaccattgaagggtctattcatccaagcacctata
ttcatgagctttttctttgccatatcaaacatggttgagaaagttccttctttcaaagga
ggcgggatatattggtttactgatttgacaactcctgatgagcttttaattctcccaatg
ttgacatcgcttactttcttggttacggtagagttaaatatgcaagatggcatggaagga
aatcctatgttgaagacgatgaagaatttctctagagtaatggctgttttgactattcca
tttacgatgagctttcccaaggcaattttcttttactgggtcacatcgaacttgttctct
cttgggtatggttttgttcttcggaagccagctgtgaggagtttcttagatcttcctccc
atcgaaactcagtttgctccggctcaacagccgaccttcaacctttttggtgcatccaag
tcagtacctgcagcaggttcttctattgcagaatcagatcgatcaagttctgttctaagc
cagcggttcagcgatcttgaaaacagagctaaatcaagacgtgaatcccaagattaa

KEGG   Oryza sativa japonica (Japanese rice): 4334759
Entry
4334759           CDS       T01015                                 
Name
(RefSeq) ALBINO3-like protein 1, chloroplastic isoform X1
  KO
K03217  YidC/Oxa1 family membrane protein insertase
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03060  Protein export
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    4334759
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:osa03029]
    4334759
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:osa02044]
    4334759
Mitochondrial biogenesis [BR:osa03029]
 Mitochondrial quality control factors
  Mitochondrial respiratory chain complex assembly factors
   Complex-IV assembly factors
    4334759
Secretion system [BR:osa02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   4334759
SSDB
Motif
Pfam: 60KD_IMP DUF2062
Other DBs
NCBI-GeneID: 4334759
NCBI-ProteinID: XP_015631158
UniProt: A0A8J8YKH3 Q10AQ5
LinkDB
Position
3:join(36484465..36484800,36485786..36485896,36486575..36486649,36487070..36487130,36487311..36487384,36487469..36487573,36488004..36488111,36488509..36488612,36488910..36489128,36489410..36489551,36489638..36489730,36489867..36489971)
AA seq 510 aa
MDAHLLLLARPRALALAAARAPGGVAGFRRPASARRVAPRRVVLRPVAALGGGGGFAEVG
ELFGRVEAFLYTVADAAVSASPEVVQGGGGGTKEAAGDWLSGITNSMETVLKVLKDGLSA
LHVPYPYGFAIILLTVLVKAATFPLTKKQVESAIAMRSLQPQVKAIQERYAGDQERIQLE
TARLYKLSDVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAA
RQSGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYVSSQVMQPPQNNDPSQQGAQ
AVVKFLPLLIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVKEYIDKLAKEE
STNLGKPEPAIKSDPLPKVGKPPASQEPEPSGPQRGERFRKLKEEESRRKVFLEKAEQTE
QAGTQAGIVDGKQNSDASGDNIDEQESHENEPIIANGNGGLSHSTNEMIPNGSMKEDIIQ
ESTDSHSSVIDPTSHDAHKSRDEENEQDAV
NT seq 1533 nt   +upstreamnt  +downstreamnt
atggacgcccacctcctcctcctcgcgcgcccgcgagccctagccctcgccgccgcgcga
gcccccggtggcgtcgccggcttcaggcggcccgcctcggcgcgccgggtggccccgcgc
cgcgtcgtacttcgaccggtggcggcgctggggggtggtggtggatttgcggaggtgggg
gagctgttcgggcgcgtcgaggcgttcctctacacggtcgcggatgcggccgtctcggcg
tccccggaggtggtgcagggaggcggcggggggaccaaggaggcggccggggactggctc
tccggcatcaccaactccatggagaccgtgctcaaggttttaaaagatggtctgtcagct
ctccatgttccttatccgtatggatttgcaatcatccttctaacagttctcgtcaaggca
gctacatttcctcttacaaagaagcaggttgagtctgcaattgcaatgaggtcactgcaa
cctcaagttaaggctattcaagaacgttatgctggtgatcaggaaaggatacagcttgaa
actgctcgtttatataagttgtcagatgttgacccgctcgcagggtgcttgcctactctt
gtgacaataccggtttggattggtctatacagagctctctccaatgtagctaatgaggga
cttcttaccgaaggctttttctggataccttctttggctggccctacaacaattgctgca
cggcaaagtggccagggaatatcatggctatttccctttacggatggtcatccacctctt
ggctggtcggacactctggcataccttgttttaccagttcttcttgttatttcccaatat
gtatcttctcaagtaatgcagccaccacagaacaatgatcctagccaacaaggtgctcaa
gctgtagtgaagttcctgcctttgctaattggttattttgctctctctgttccttctgga
ctaagtctatattggcttacgaataatatccttagcactgcacaacaagtatggcttcaa
aagcttggaggtgccaaaaatcccgtcaaagaatacattgataagctcgctaaagaagaa
tcaactaatcttggaaagcccgagcctgctattaagagtgatcctctccctaaagttggt
aaacccccggccagtcaagagccagaaccaagtggaccacaacgtggtgaaagatttaga
aaactaaaggaagaagagtcaaggagaaaagtgtttttggaaaaagcggaacagacagaa
caggcaggcacacaagctggcatcgtcgatggaaaacagaattcagatgcatctggagac
aacatagatgaacaggaatctcatgaaaatgaaccaattatagctaacggcaatggtgga
cttagccatagtacaaatgaaatgataccaaatggaagcatgaaagaggatataattcag
gaatcaactgacagccattcttcagttatcgaccctacgtcacatgacgctcataaatcg
agggacgaagagaacgaacaagatgcagtgtag

KEGG   Oryza sativa japonica (Japanese rice): 4349143
Entry
4349143           CDS       T01015                                 
Name
(RefSeq) mitochondrial inner membrane protein OXA1-like
  KO
K03217  YidC/Oxa1 family membrane protein insertase
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03060  Protein export
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    4349143
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:osa03029]
    4349143
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:osa02044]
    4349143
Mitochondrial biogenesis [BR:osa03029]
 Mitochondrial quality control factors
  Mitochondrial respiratory chain complex assembly factors
   Complex-IV assembly factors
    4349143
Secretion system [BR:osa02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   4349143
SSDB
Motif
Pfam: 60KD_IMP
Other DBs
NCBI-GeneID: 4349143
NCBI-ProteinID: XP_015612781
UniProt: Q8LNI1 A0A0N7KS34
LinkDB
Position
10:join(20857475..20857902,20858007..20858097,20859436..20859477,20859617..20859675,20859997..20860072,20860173..20860304,20860689..20860796,20861478..20861532,20861625..20861875)
AA seq 413 aa
MAFAARRSLASRLSHHLTRRLHPATAPHLLASHSDDDPSPPPELPPFPHSPSPRHPRAGQ
ALDRHLLPFSLHHLAGLRRRGFSSAAGEVDAAAGVLADAAAAAEAVPAPFPGEVAAAAAD
SFFPVAALQHVIDYIHTFTGLNWWACIALATVLIRSATVPLLVNQLKATQKLNAIRPEME
AIKEEMNAMDPKSAKEGKAKMTALFQKHGVSPFTPLKGLLIQGPIFMSFFFAIRNMIDKV
PSMKGGGSLWFTDLTTPDPLYILPVLTALIFLVTVELNLQEGMEGNPMARKMKNFSRGMA
VLTVPFTMSFAKGIFCYWITSNLFTLTYGFVIRRPAVRKFCNLPALEAQSASAKKQMFNL
FGGSKALTTAESPVAITGGPQSSLEQPDAAALGYRVKNPEKKAKSRGKSRRRR
NT seq 1242 nt   +upstreamnt  +downstreamnt
atggcgttcgcggcgcggagaagcctcgcctcccgcctctcccaccacctcacccgccgc
ctccacccggcgacggcgccccacctcctcgcctcccactccgacgacgacccctcgccg
ccacccgagctcccaccattcccccactccccgtctccgcgccacccgcgggcgggccaa
gccctagaccgccacctcctccccttctccctccatcacctcgcggggctacgccgccgc
ggcttctcctcggccgccggcgaggtcgatgctgccgcgggcgtcctcgccgacgccgcg
gcggcggcggaggctgtgccggcgccgttcccgggggaggtggcggcggcggccgctgac
tcgttcttccccgtcgccgcgctgcagcacgtcatcgattacatccacaccttcaccggt
ctgaactggtgggcctgtattgcgctggcgacagtgctgatccggagcgcgaccgtgccg
ctattggtgaaccagttgaaggctacacagaagctaaatgcaataaggccagagatggaa
gccatcaaagaagaaatgaatgcgatggatccaaaatcagcaaaggaagggaaagctaaa
atgactgcactctttcaaaagcatggcgttagtccatttactccacttaagggactcctg
atccaagggccaatatttatgagttttttctttgctataagaaacatgattgacaaagta
ccatcgatgaaaggaggtggatcactttggtttactgatctaacaacaccggatcctctt
tacatccttccagttttaacggcattgatcttcttggtgacagttgagcttaacttgcaa
gaaggaatggagggaaatcctatggctagaaaaatgaagaacttttctagaggaatggct
gttttgacagtcccattcacaatgagttttgccaagggaattttctgttactggattaca
tcaaacttgttcactctgacatatggttttgttatccggcgaccggctgtgaggaaattt
tgtaatcttcctgctttggaagctcagtctgcatctgcaaagaagcaaatgttcaatcta
tttggtggatccaaggcattaactacagcagagtcacctgtagcaattacgggaggtccg
caatctagtttggagcaacctgatgctgctgctctgggctatcgggtcaaaaatcctgag
aagaaggcaaaatccagaggcaaatctcggaggcgcaggtaa

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