Oryza sativa japonica (Japanese rice): 4325100
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Entry
4325100 CDS
T01015
Symbol
RPL5, RPL5A
Name
(RefSeq) large ribosomal subunit protein uL18z
KO
K02932
large subunit ribosomal protein L5e
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4325100 (RPL5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
osa01009
]
4325100 (RPL5)
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4325100 (RPL5)
Protein phosphatases and associated proteins [BR:
osa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
4325100 (RPL5)
Ribosome [BR:
osa03011
]
Ribosomal proteins
Eukaryotes
Large subunit
4325100 (RPL5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L5e
Ribosomal_L18_c
Motif
Other DBs
NCBI-GeneID:
4325100
NCBI-ProteinID:
NP_001393118
LinkDB
All DBs
Position
1:join(39605304..39605306,39605990..39606062,39606146..39606237,39606347..39606473,39606565..39606644,39606733..39606849,39607016..39607150,39607351..39607520,39607605..39607722)
Genome browser
AA seq
304 aa
AA seq
DB search
MGGFVKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKD
ITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEY
EGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRF
AGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALY
KKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAGADDDDEE
EDDE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgggagggtttgtcaagacccagaagaccaatgcctaccacaagcgtttccaagtcaag
ttcaagagacggaggcagggcaagactgactacagggccaggattaggctcaccaaccaa
gataagaacaagtacaacacaccgaagtaccgcttcgttgtgagatttacaaacaaagat
atcacagctcaaattgtctatgctaccattgctggtgatatcgtgatggctgctgcctac
tcccatgagctgcctcgctatggtcttgaagttggtctcaccaactatgcggcagcttat
tgcactggcttgcttttggctcgccgtgtgctcaagctccgtggtttggaccaggagtac
gagggcaatattgaggccactggggaggactactatgttgaaccagctgatgaaaggcgg
cctttccgtgctctcttggatgttggcctcattaggacaaccactggaaaccgtgtcttt
ggtgccctcaagggagctttggatggtggtcttgacattcctcacagtgacaagaggttt
gctgggttcaagaaggacgagaagcagcttgattctgatattcaccgcaagtacatctac
ggtgggcacgtggctgactacatgaggtctatggcggaggaggaacctgagaaattccaa
gcccacttcagtgagtacctcaagaagggaattgatgctgatggcatggaagcactgtac
aagaaggtccatgctgccatccgtgctgatcctaccatggccaaatcaaccaagaaggaa
ccggcgacccacaagagatacaacctcaagaagctaacctacgaacagaggaaggccagt
cttgtcgaaagattgaatgctctcaactcctctgctggtgctgatgatgatgacgaggaa
gaggatgatgagtga
Oryza sativa japonica (Japanese rice): 9271934
Help
Entry
9271934 CDS
T01015
Symbol
OsJ_04400, RPL5B
Name
(RefSeq) large ribosomal subunit protein uL18y
KO
K02932
large subunit ribosomal protein L5e
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
9271934 (OsJ_04400)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
osa01009
]
9271934 (OsJ_04400)
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
9271934 (OsJ_04400)
Protein phosphatases and associated proteins [BR:
osa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
9271934 (OsJ_04400)
Ribosome [BR:
osa03011
]
Ribosomal proteins
Eukaryotes
Large subunit
9271934 (OsJ_04400)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L5e
Ribosomal_L18_c
MecA_N
Motif
Other DBs
NCBI-GeneID:
9271934
NCBI-ProteinID:
NP_001391842
LinkDB
All DBs
Position
1:join(39599942..39599944,39600666..39600738,39600836..39600927,39601037..39601163,39601255..39601334,39601417..39601533,39601698..39601832,39602019..39602188,39602275..39602392)
Genome browser
AA seq
304 aa
AA seq
DB search
MGGFVKTQKTHAYFKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKD
ITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEY
EGNVEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRF
AGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMESLY
KKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAGADDDDEE
EDDE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgggagggtttgtcaagacccagaagacccatgcctacttcaagcgattccaagtcaag
ttcaagagacggaggcagggcaagactgactacagggccaggattaggctcaccaaccaa
gataagaacaagtacaacacaccgaagtaccgcttcgttgtgagatttacaaacaaagat
atcacagctcaaattgtctatgctaccattgcgggtgatatcgtgatggctgctgcctac
tcccatgagctgcctcgttatggtcttgaagttggtctcaccaactatgcggcagcttac
tgcactggcttgcttctggctcgtcgtgtgctcacgctccgtggtttggaccaggagtac
gagggcaatgttgaggccactggggaggactactatgttgaaccagctgatgaaaggagg
cctttccgtgctctcttggatgttggcctcattaggacaaccactggaaaccgtgtcttt
ggtgccctcaagggagctttggatggtggtcttgacattcctcacagtgacaagaggttt
gctgggttcaagaaggacgagaagcagcttgattctgatattcaccgcaagtacatctac
ggtgggcacgtggctgactacatgaggtctatggctgaggaggaacctgagaaattccaa
gcccactttagtgagtacctcaagaagggaattgacgctgatggcatggaatcactgtac
aagaaggtccatgctgccatccgcgccgatcctaccatggccaaatcgaccaagaaggaa
ccggctacccacaagagatacaacctcaagaagctgacctacgagcagaggaaggccagt
ctcgtcgaaagattgaatgctctcaactcctccgctggtgctgatgatgatgacgaggaa
gaggatgacgagtga
DBGET
integrated database retrieval system