KEGG   Oryza sativa japonica (Japanese rice): 4325163
Entry
4325163           CDS       T01015                                 
Symbol
METK3
Name
(RefSeq) S-adenosylmethionine synthase 3 isoform X1
  KO
K00789  S-adenosylmethionine synthetase [EC:2.5.1.6]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00270  Cysteine and methionine metabolism
osa00670  One carbon pool by folate
osa00999  Biosynthesis of various plant secondary metabolites
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
osa01230  Biosynthesis of amino acids
osa01240  Biosynthesis of cofactors
Module
osa_M00034  Methionine salvage pathway
osa_M00368  Ethylene biosynthesis, methionine => ethylene
osa_M00953  Mugineic acid biosynthesis, methionine => 3-epihydroxymugineic acid
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    4325163 (METK3)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    4325163 (METK3)
  09110 Biosynthesis of other secondary metabolites
   00999 Biosynthesis of various plant secondary metabolites
    4325163 (METK3)
Enzymes [BR:osa01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.6  methionine adenosyltransferase
     4325163 (METK3)
SSDB
Motif
Pfam: S-AdoMet_synt_C S-AdoMet_synt_M S-AdoMet_synt_N MSA_2
Other DBs
NCBI-GeneID: 4325163
NCBI-ProteinID: XP_015614357
UniProt: Q9LGU6
LinkDB
Position
1:complement(10683087..10684277)
AA seq 396 aa
MAEVDTFLFTSESVNEGHPDKLCDQISDAVLDACLAEDPESKVACETCTKTNMVMVFGEI
TTKANVDYEKIVRDTCRGIGFVSNDVGLDAEHCKVLVNIEQQSPDIAQGVHGHFTKRPEE
IGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGACAWLRPDGKTQVTVEYQ
NDNGAMVPLRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGR
FVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVANG
LARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILRIVTENFDFRPGMIIINLDLMRG
GNGRYLKTAAYGHFGREDPDFTWEVVKPLKWEEPSA
NT seq 1191 nt   +upstreamnt  +downstreamnt
atggctgaggttgacaccttcctcttcacttccgagtccgtcaatgagggacaccctgac
aagctctgcgaccagatatccgatgcggtgcttgatgcgtgccttgctgaagaccctgaa
agcaaggttgcctgtgagacctgcaccaagaccaacatggtcatggtgtttggtgagatc
actaccaaggccaatgttgactatgagaagatcgtcagggatacttgccgcggcatcggc
tttgtgtccaatgatgtaggccttgatgctgaacactgtaaggtgcttgtcaacattgag
cagcaatcccctgacatcgcacagggtgtccatgggcacttcaccaagcgcccagaggag
attggtgccggtgaccaggggcatatgtttggatatgcaaccgatgagacccctgaattg
atgccactcagccatgttcttgctaccaagctcggtgcccgtctcaccgaggtccgcaag
aacggggcatgcgcatggctgaggcctgatgggaagacgcaagtgacagtggagtaccag
aacgacaatggcgccatggtccctctccgcgtccacaccgtgctcatctccacccagcac
gatgagaccgtgaccaacgacgaaatcgcggctgacctgaaggagcatgtcatcaagcct
gtcatcccagagcagtaccttgatgagaagaccatcttccatctcaacccgtcaggtcgc
ttcgtcatcggtggacctcatggagatgcaggtctcaccgggcgcaagatcatcatcgac
acctacggtggctggggagcacacggtggtggcgcgttctccggcaaggacccgaccaag
gttgaccggagcggagcctacattgcaaggcaggcggccaagagcatcgttgccaatggc
ctcgctcgccgctgcattgtccaggtgtcgtatgccattggcgtgccggaaccgctctcg
gtgttcgtcgacacttacggcacgggcaagatccctgacagggagatcctcaggattgtc
acggagaacttcgatttcaggccaggcatgatcatcatcaacctcgacctgatgaggggt
ggcaatggccgctacctgaagacggcggcttacgggcacttcgggagggaggaccctgac
ttcacctgggaggtggtgaaacccctcaagtgggaggagccttctgcataa

KEGG   Oryza sativa japonica (Japanese rice): 4326996
Entry
4326996           CDS       T01015                                 
Symbol
SAM2, SAMS2
Name
(RefSeq) S-adenosylmethionine synthase 2
  KO
K00789  S-adenosylmethionine synthetase [EC:2.5.1.6]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00270  Cysteine and methionine metabolism
osa00670  One carbon pool by folate
osa00999  Biosynthesis of various plant secondary metabolites
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
osa01230  Biosynthesis of amino acids
osa01240  Biosynthesis of cofactors
Module
osa_M00034  Methionine salvage pathway
osa_M00368  Ethylene biosynthesis, methionine => ethylene
osa_M00953  Mugineic acid biosynthesis, methionine => 3-epihydroxymugineic acid
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    4326996 (SAM2)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    4326996 (SAM2)
  09110 Biosynthesis of other secondary metabolites
   00999 Biosynthesis of various plant secondary metabolites
    4326996 (SAM2)
Enzymes [BR:osa01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.6  methionine adenosyltransferase
     4326996 (SAM2)
SSDB
Motif
Pfam: S-AdoMet_synt_C S-AdoMet_synt_M S-AdoMet_synt_N MSA_2
Other DBs
NCBI-GeneID: 4326996
NCBI-ProteinID: NP_001393223
UniProt: A0A0R7VIP9
LinkDB
Position
1:complement(12406310..12407494)
AA seq 394 aa
MAAETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEIT
TKATVDYEKIVRDTCRGIGFVSDDVGLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEEI
GAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYLN
DAGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPDKYLDEKTIFHLNPSGRF
VIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVASGL
ARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMMTINLDLKRGG
NRFIKTAAYGHFGREDPDFTWEVVKPLKYEKASS
NT seq 1185 nt   +upstreamnt  +downstreamnt
atggcggcggagacgttcctcttcacctccgagtccgtgaacgagggtcacccggacaag
ctgtgcgaccaggtgtcggacgcggtgctcgacgcgtgcctcgcccaggaccccgacagc
aaggtggcgtgcgagacgtgcaccaagaccaacatggtgatggtgttcggcgagatcacc
accaaggccaccgtcgactacgagaagatcgtccgcgacacctgccgcggcatcggcttc
gtgtccgacgacgtcggcctcgacgccgaccgctgcaaggtgctcgtcaacatcgagcag
cagtcgcccgacatcgcgcagggggtgcacggccacttcaccaagcgccccgaggagatc
ggcgccggcgaccagggccacatgttcggctacgccaccgacgagacccccgagctgatg
cccctcagccacgtcctcgccaccaagctcggcgcccgcctcaccgaggtccgcaagaac
ggcacctgcgcctggctcaggcccgacggcaagacccaggtcaccgttgagtacctcaac
gacgccggcgccatggtccccgtccgcgtccacaccgtcctcatctccacccagcacgac
gagaccgtcaccaacgacgagatcgccgccgacctcaaggagcacgtcatcaagccggtc
atccccgacaagtacctcgacgagaagaccatcttccacctcaacccctcgggccgcttc
gtcatcggcgggccccacggcgacgccggcctcaccggccgcaagatcatcatcgacacc
tacggcggatggggcgcgcacggcggcggcgccttctccggcaaggacccgaccaaggtc
gaccggagcggcgcctacatcgccaggcaggccgccaagagcatcgtcgccagcggcctc
gcccgccgctgcatcgtgcaggtgtcgtacgccatcggcgtccccgagccgctctccgtg
ttcgtcgactcctacggcaccggcaagatccccgacaaggagatcctcaagatcgtcaag
gagaacttcgatttcaggcccgggatgatgaccatcaacctcgacctcaagaggggcggc
aaccggttcatcaagaccgcggcgtacggccatttcggccgcgaggatcccgacttcaca
tgggaggttgtcaagccgctcaagtatgagaaggcatcttcctga

KEGG   Oryza sativa japonica (Japanese rice): 4327097
Entry
4327097           CDS       T01015                                 
Name
(RefSeq) LOW QUALITY PROTEIN: S-adenosylmethionine synthase 2-like
  KO
K00789  S-adenosylmethionine synthetase [EC:2.5.1.6]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00270  Cysteine and methionine metabolism
osa00670  One carbon pool by folate
osa00999  Biosynthesis of various plant secondary metabolites
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
osa01230  Biosynthesis of amino acids
osa01240  Biosynthesis of cofactors
Module
osa_M00034  Methionine salvage pathway
osa_M00368  Ethylene biosynthesis, methionine => ethylene
osa_M00953  Mugineic acid biosynthesis, methionine => 3-epihydroxymugineic acid
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    4327097
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    4327097
  09110 Biosynthesis of other secondary metabolites
   00999 Biosynthesis of various plant secondary metabolites
    4327097
Enzymes [BR:osa01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.6  methionine adenosyltransferase
     4327097
SSDB
Motif
Pfam: S-AdoMet_synt_N S-AdoMet_synt_M MSA_2
Other DBs
NCBI-GeneID: 4327097
NCBI-ProteinID: XP_015643840
UniProt: A2ZQH9 A0A0P0UZX4
LinkDB
Position
1:complement(join(5842775..5842795,5843106..5843681))
AA seq 198 aa
MAAETFLFTSESRNEGHPDKLCDQVSDAVLDVCLAQDPEGKVACETCTKTNMVMVFGEIT
TKASVDYEKIVRDTCRNIGFVSDDIGLDADRCKVLVNIEQQSPDIAQGVHGHFTKHPEEI
GAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAXLRPDGKTQVTVECLN
DAGAIVPVRVQIDENQIR
NT seq 597 nt   +upstreamnt  +downstreamnt
atggcggcggagacgttcctcttcacctccgagtccaggaacgagggtcaccccgacaag
ctgtgcgaccaggtgtccgacgccgtcctcgacgtgtgcctcgcccaggaccccgagggc
aaggtggcgtgcgagacctgcaccaagacaaacatggtcatggtgttcggcgagatcacc
accaaggccagcgtcgactacgagaagatcgtccgcgacacctgccgcaacatcggcttc
gtctccgacgacatcggtctcgacgccgaccgctgcaaggtgctcgtcaacatcgagcag
cagtcgcccgacattgcccagggcgtgcacggccacttcaccaagcaccccgaggagatc
ggcgccggcgaccagggccacatgttcggctacgccaccgacgagacccctgagctgatg
cccctcagccacgtcctcgccaccaagctcggcgcccgcctcaccgaggtccgcaagaac
ggcacctgcgcctagctcaggcccgacggcaagacccaggtcacagtcgagtgcctcaac
gacgccggcgccattgtccccgtccgcgtccaaattgacgaaaatcagattcgctga

KEGG   Oryza sativa japonica (Japanese rice): 4337733
Entry
4337733           CDS       T01015                                 
Symbol
SAM1, SAMS
Name
(RefSeq) S-adenosylmethionine synthase 1
  KO
K00789  S-adenosylmethionine synthetase [EC:2.5.1.6]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00270  Cysteine and methionine metabolism
osa00670  One carbon pool by folate
osa00999  Biosynthesis of various plant secondary metabolites
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
osa01230  Biosynthesis of amino acids
osa01240  Biosynthesis of cofactors
Module
osa_M00034  Methionine salvage pathway
osa_M00368  Ethylene biosynthesis, methionine => ethylene
osa_M00953  Mugineic acid biosynthesis, methionine => 3-epihydroxymugineic acid
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    4337733 (SAM1)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    4337733 (SAM1)
  09110 Biosynthesis of other secondary metabolites
   00999 Biosynthesis of various plant secondary metabolites
    4337733 (SAM1)
Enzymes [BR:osa01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.6  methionine adenosyltransferase
     4337733 (SAM1)
SSDB
Motif
Pfam: S-AdoMet_synt_C S-AdoMet_synt_M S-AdoMet_synt_N Y1_Tnp
Other DBs
NCBI-GeneID: 4337733
NCBI-ProteinID: NP_001389410
LinkDB
Position
5:2104359..2105549
AA seq 396 aa
MAALDTFLFTSESVNEGHPDKLCDQVSDAVLDACLAEDPDSKVACETCTKTNMVMVFGEI
TTKANVDYEKIVRETCRNIGFVSADVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEE
IGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYR
NESGARVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGR
FVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASG
LARRCIVQVSYAIGVPEPLSVFVDTYGTGRIPDKEILKIVKENFDFRPGMIIINLDLKKG
GNGRYLKTAAYGHFGRDDPDFTWEVVKPLKWEKPSA
NT seq 1191 nt   +upstreamnt  +downstreamnt
atggccgcacttgataccttcctctttacctcggagtctgtgaacgagggccaccctgac
aagctctgcgaccaagtctcagatgctgtgcttgatgcctgcctcgccgaggaccctgac
agcaaggtcgcttgtgagacctgcaccaagacaaacatggtcatggtctttggtgagatc
accaccaaggctaacgttgactatgagaagattgtcagggagacatgccgtaacatcggt
tttgtgtcagctgatgtcggtctcgatgctgaccactgcaaggtgcttgtgaacatcgag
cagcagtcccctgacattgcacagggtgtgcacggccacttcaccaagcgccctgaggag
attggtgctggtgaccagggacacatgtttggatatgcaactgatgagacccctgagttg
atgcccctcagccatgtccttgctaccaagcttggcgctcgtcttacggaggttcgcaag
aatgggacctgcgcatggctcaggcctgacgggaagacccaagtgactgttgagtaccgc
aatgagagcggtgccagggtccctgtccgtgtccacaccgtcctcatctctacccagcat
gatgagacagtcaccaacgatgagattgctgctgacctgaaggagcatgtcatcaagcct
gtcattcccgagcagtaccttgatgagaagacaatcttccatcttaacccatctggtcgc
ttcgtcattggcggacctcatggtgatgctggtctcactggccggaagatcatcattgac
acttatggtggctggggagctcacggtggtggtgccttctctggcaaggacccaaccaag
gttgaccgcagtggagcatacgtcgcaaggcaagctgccaagagcattgttgctagtggc
cttgctcgccgctgcattgtccaagtatcatacgccatcggtgtcccagagccactgtcc
gtattcgtcgacacatacggcactggcaggatccctgacaaggagatcctcaagattgtg
aaggagaacttcgacttcaggcctggcatgatcatcatcaaccttgacctcaagaaaggc
ggcaacggacgctacctcaagacggcggcttacggtcacttcggaagggacgacccagac
ttcacctgggaggtggtgaagcccctcaagtgggagaagccttctgcctaa

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