Oryza sativa japonica (Japanese rice) (RefSeq): 4325946 Help Entry 4325946           CDS       T01015                                  Name (RefSeq) ras-related protein Rab7   KO K07897   Ras-related protein Rab-7A Organism osa  Oryza sativa japonica (Japanese rice) (RefSeq) Pathway osa04144   Endocytosis osa04145   Phagosome Brite KEGG Orthology (KO) [BR:osa00001]  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     4325946    04145 Phagosome     4325946  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:osa04131]     4325946   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:osa04147]     4325946    04031 GTP-binding proteins [BR:osa04031]     4325946 Membrane trafficking [BR:osa04131]  Endosome - Lysosome transport   Rab GTPases and associated proteins    Rab GTPases     4325946 Exosome [BR:osa04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    4325946   Exosomal proteins of other body fluids (saliva and urine)    4325946   Exosomal proteins of colorectal cancer cells    4325946   Exosomal proteins of bladder cancer cells    4325946 GTP-binding proteins [BR:osa04031]  Small (monomeric) G-proteins   Rab Family    Rab7/9 [OT]     4325946 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Ras Roc Arf Gtr1_RagA MMR_HSR1 GTP_EFTU AAA_16 RsgA_GTPase AAA_22 Septin AAA_5 AAA_7 NTPase_1 AAA_24 PduV-EutP cobW DAP3 G-alpha SRPRB NACHT Sigma54_activat NB-ARC MCM ATPase_2 TniB Motif Other DBs NCBI-GeneID:  4325946 NCBI-ProteinID:  XP_015632387 UniProt:  Q5JLU1 A0A0P0V7B6 LinkDB All DBs Position 1:complement(29730135..29735136) Genome browser AA seq 207 aa AA seqDB search MSTSRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLIEDRLVTL QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSNRSFDTLNTWHDEFLNQASPSDPKTFP FILLGNKIDVDGGKSRVVSEKKAMEWCSSKGNIPYFETSAKEDRNVDSAFLSVAKLALEH ERDQDIYFQTVVPDPVPEAEQRSGCAC NT seq 624 nt NT seq  +upstreamnt  +downstreamnt atgtcgacgtcgcgcaggaggaccctcctcaaggtcatcgtcctcggcgacagcggggtg gggaagacgtcgcttatgaaccaatatgttcacaagaagtttagccagcagtacaaagct acaattggtgcggatttcgtcaccaaggaggtcctcattgaagataggctcgtgactctg cagatctgggacactgcggggcaggagaggttccagagtcttggtgttgcgttttacaga ggagcagattgttgtgtgctcgtctatgacgtcaattctaacaggtcatttgacacgctc aacacatggcatgatgagttcctcaaccaagctagcccatcagatcccaaaacttttcca ttcatcttacttgggaacaagattgacgtagatggagggaaaagcagagtggtttctgag aaaaaagcaatggagtggtgttcatccaaaggcaatattccttattttgaaacttctgca aaagaggaccgcaatgtcgacagtgcgttcttgtctgtcgctaagcttgctttagagcat gagcgtgatcaggacatctacttccagacggttgttccagatcctgttccagaggctgaa cagagaagtggatgtgcatgctag

Oryza sativa japonica (Japanese rice) (RefSeq): 4327180 Help Entry 4327180           CDS       T01015                                  Name (RefSeq) ras-related protein Rab7   KO K07897   Ras-related protein Rab-7A Organism osa  Oryza sativa japonica (Japanese rice) (RefSeq) Pathway osa04144   Endocytosis osa04145   Phagosome Brite KEGG Orthology (KO) [BR:osa00001]  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     4327180    04145 Phagosome     4327180  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:osa04131]     4327180   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:osa04147]     4327180    04031 GTP-binding proteins [BR:osa04031]     4327180 Membrane trafficking [BR:osa04131]  Endosome - Lysosome transport   Rab GTPases and associated proteins    Rab GTPases     4327180 Exosome [BR:osa04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    4327180   Exosomal proteins of other body fluids (saliva and urine)    4327180   Exosomal proteins of colorectal cancer cells    4327180   Exosomal proteins of bladder cancer cells    4327180 GTP-binding proteins [BR:osa04031]  Small (monomeric) G-proteins   Rab Family    Rab7/9 [OT]     4327180 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase cobW ATP_bind_1 Septin NTPase_1 SRPRB AAA_7 AAA_16 AAA_22 PduV-EutP AAA_24 ATPase_2 TniB NACHT RNA_helicase MCM NB-ARC AAA_5 Motif Other DBs NCBI-GeneID:  4327180 NCBI-ProteinID:  XP_015649338 UniProt:  Q5N7Z9 B9EUG4 LinkDB All DBs Position 1:7043941..7047553 Genome browser AA seq 207 aa AA seqDB search MASRRRMLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQ IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPF VVLGNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIKNE PEEEIYLPDTIDVGGAGRQQRSSGCEC NT seq 624 nt NT seq  +upstreamnt  +downstreamnt atggcgtcgcgcaggcgaatgctcctcaaggtcatcatcctcggtgacagcggggtcggg aagacgtctctgatgaaccagtacgtgaacaagaagttcagcaatcagtacaaagcgacg atcggcgcggatttcctgaccaaggaggtgcagatcgacgaccggctcttcacattgcag atttgggacacagcgggacaggagcgatttcagagtcttggtgtggcattttaccgggga gctgactgctgtgttcttgtatatgatgtcaatgttaccaagtcatttgaaaggctcaac agctggcgtgaggaattcctaattcaagctagcccatcagatccagagaatttccctttt gttgtacttggaaacaaaattgatgttgatggtggtaatagccggactgtttctgagaag aaagctaaagcttggtgtgcttctaagggaaacatcccttattttgagacatctgctaaa gaaggcttcaacgtggaggctgcttttgagtgtatagcaaggaatgctatcaagaatgaa ccggaagaggagatatatcttcctgatacaattgatgttggaggtgctggaaggcaacag cgctcgtcaggctgtgaatgctag

Oryza sativa japonica (Japanese rice) (RefSeq): 4339322 Help Entry 4339322           CDS       T01015                                  Name (RefSeq) ras-related protein Rab7   KO K07897   Ras-related protein Rab-7A Organism osa  Oryza sativa japonica (Japanese rice) (RefSeq) Pathway osa04144   Endocytosis osa04145   Phagosome Brite KEGG Orthology (KO) [BR:osa00001]  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     4339322    04145 Phagosome     4339322  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:osa04131]     4339322   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:osa04147]     4339322    04031 GTP-binding proteins [BR:osa04031]     4339322 Membrane trafficking [BR:osa04131]  Endosome - Lysosome transport   Rab GTPases and associated proteins    Rab GTPases     4339322 Exosome [BR:osa04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    4339322   Exosomal proteins of other body fluids (saliva and urine)    4339322   Exosomal proteins of colorectal cancer cells    4339322   Exosomal proteins of bladder cancer cells    4339322 GTP-binding proteins [BR:osa04031]  Small (monomeric) G-proteins   Rab Family    Rab7/9 [OT]     4339322 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Ras Roc Arf MMR_HSR1 Gtr1_RagA GTP_EFTU RsgA_GTPase AAA_16 ATP_bind_1 AAA_22 SRPRB PduV-EutP NTPase_1 Septin AAA_7 AAA_24 ATPase_2 cobW RNA_helicase MCM NACHT NB-ARC DAP3 TniB AAA_5 G-alpha Motif Other DBs NCBI-GeneID:  4339322 NCBI-ProteinID:  XP_015639739 UniProt:  Q75IJ1 Q0DGR3 LinkDB All DBs Position 5:25620526..25623307 Genome browser AA seq 206 aa AA seqDB search MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF VLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGTNVEEAFQCIVKNALKNE PEEELYVPDTVDVVGGNRAQRSSGCC NT seq 621 nt NT seq  +upstreamnt  +downstreamnt atggcttcgcgccgccgcaccctcctcaaggtcatcatcctcggcgacagcggggttggg aagacgtccctgatgaaccaatatgtgaacaagaagttcagcaaccagtacaaggctacg attggcgcggatttcctcaccaaggaggttcagttcgaggataggctcttcactttgcaa atatgggatactgctggccaggaaaggtttcagagtcttggtgttgcattctaccgtgga gcagattgctgtgttctagtttatgatgtcaattctatgaagtcatttgataatcttaac aactggcgtgaagaatttctaattcaggcaagcccatcagaccctgataacttccctttt gttcttttgggcaacaaagttgatgtagacggtggcaacagccgtgtggtctctgagaag aaggcaaaggcatggtgtgcctctaaagggaatatcccatactttgagacatctgccaag gatggtacaaacgtggaggaggctttccagtgcattgtaaagaatgctctgaagaatgaa ccagaggaagaactgtatgtgccggacaccgtggatgtggtgggtggcaaccgggcccaa agatcatcaggctgctgctag

Oryza sativa japonica (Japanese rice) (RefSeq): 4339450 Help Entry 4339450           CDS       T01015                                  Name (RefSeq) ras-related protein Rab7   KO K07897   Ras-related protein Rab-7A Organism osa  Oryza sativa japonica (Japanese rice) (RefSeq) Pathway osa04144   Endocytosis osa04145   Phagosome Brite KEGG Orthology (KO) [BR:osa00001]  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     4339450    04145 Phagosome     4339450  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:osa04131]     4339450   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:osa04147]     4339450    04031 GTP-binding proteins [BR:osa04031]     4339450 Membrane trafficking [BR:osa04131]  Endosome - Lysosome transport   Rab GTPases and associated proteins    Rab GTPases     4339450 Exosome [BR:osa04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    4339450   Exosomal proteins of other body fluids (saliva and urine)    4339450   Exosomal proteins of colorectal cancer cells    4339450   Exosomal proteins of bladder cancer cells    4339450 GTP-binding proteins [BR:osa04031]  Small (monomeric) G-proteins   Rab Family    Rab7/9 [OT]     4339450 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Ras Roc Arf MMR_HSR1 Gtr1_RagA GTP_EFTU RsgA_GTPase AAA_16 AAA_22 Septin AAA_7 cobW NTPase_1 PduV-EutP AAA_24 AAA_5 SRPRB ATPase_2 NB-ARC NACHT MCM G-alpha TniB DAP3 Motif Other DBs NCBI-GeneID:  4339450 NCBI-ProteinID:  XP_015638303 UniProt:  B9FLC1 Q0DGE4 LinkDB All DBs Position 5:26664487..26666541 Genome browser AA seq 206 aa AA seqDB search MASSRRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTL QIWDTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFP FILLGNKIDIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALEH EHDQDIYFKTVAQPAPDTEHTSGCAC NT seq 621 nt NT seq  +upstreamnt  +downstreamnt atggcgtcgtcgcggaggcggacgctgctcaaggtcatcgtcctcggcgacagcggggtg gggaagacgtccctgatgaaccaatacgtgaacaagaagtttagccagcagtacaaggcg acgatcggcgccgatttcgtcaccaaggaggttctcattgaagacaggcttgtcaccttg cagatctgggacacggcaggacaggagaggtttcagagtctcggtgtggcgttctacaga ggtgcagattgctgtatgctagtctacgatgtcaatgctaaaagatctttcaatgcactc aacacctggcatgatgagttcctcacccaagctagcccatcagatcccaaacattttccc ttcatattactcggcaacaagattgacatagatgccggaaacagacgtgccatccctgag aagaaagcaaaagagtggtgcgtctccaaaggcaacattccgtatttcgaaacctctgcg aaagacgactacaatgttgacagtgcttttctgtgcattgccaagcttgctctggagcat gagcatgatcaggacatctacttcaagactgttgcacaaccagcccctgatactgaacat accagcggatgtgcttgctag

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