Oryza sativa japonica (Japanese rice) (RefSeq): 4326383
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Entry
4326383 CDS
T01015
Name
(RefSeq) 50S ribosomal protein L25
KO
K02897
large subunit ribosomal protein L25
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4326383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4326383
Ribosome [BR:
osa03011
]
Ribosomal proteins
Bacteria
Large subunit
4326383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_TL5_C
Ribosomal_L25p
Motif
Other DBs
NCBI-GeneID:
4326383
NCBI-ProteinID:
XP_015626950
UniProt:
A2ZUZ6
Q0JLK3
LinkDB
All DBs
Position
1:complement(23234794..23237667)
Genome browser
AA seq
271 aa
AA seq
DB search
MAMLLRRPLHTLPILPLLGRHLSSSSAAAEAVTADHHHHHDADLLSPPFDYLPGHPRPDA
KHDELILAVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLVSVQSKQIRKLVDH
LGRSFFLSRLFRLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEPLNVTFMRAPSSALLK
IDVPLMFIGEDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLMRDL
KVHPALRLLQSPEQPICSIIGSRAPDQKKSK
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctgctccggcgacccctccacacccttcccatcctccccctcctcggccgc
cacctctcctcctcctccgccgccgcggaggcggtcaccgcggaccaccaccaccaccac
gacgcggacctcctgtcgccgccgttcgactacctcccgggccacccgcggccggacgcg
aagcacgacgagctcatcctcgccgtgccgcgcgcctcctcggggcggcacgtggcggcc
aaggagcggaaggccgggcgggtgccggccatcgtgttcgagcaggagaacgggcaggag
ggcggcaacaagcggctggtgtccgtgcagtccaagcagatccgcaagctcgtcgaccac
ctcggccgctccttcttcctctcccgcctcttccgcctccaggtctggtccgagcacgcc
ggccagggggagctcatcgagagcgtccgcgtccttccccgcaaggtacacttacatgca
ggaactgatgagcctctgaatgtgacattcatgagagccccttcttcagccctactcaag
atagatgttcctttgatgttcatcggagaggatgcatcgcctggtctcaggaaaggggct
tacttcaacaccataaaacgaactgtcaagtatctgtgccctgctgacatagtgccacca
tacattgaggtggatttaagtgagttggatgtcggacagaaactgttgatgcgtgatctc
aaagttcacccagctctgaggttgcttcagtcaccggaacaacccatctgtagcattata
ggatcaagagcacctgatcagaagaagtcaaaataa
Oryza sativa japonica (Japanese rice) (RefSeq): 4338257
Help
Entry
4338257 CDS
T01015
Name
(RefSeq) 50S ribosomal protein L25
KO
K02897
large subunit ribosomal protein L25
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4338257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4338257
Ribosome [BR:
osa03011
]
Ribosomal proteins
Bacteria
Large subunit
4338257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_TL5_C
Ribosomal_L25p
Motif
Other DBs
NCBI-GeneID:
4338257
NCBI-ProteinID:
XP_015638371
UniProt:
Q0DJK3
Q5W6B7
LinkDB
All DBs
Position
5:10865357..10869240
Genome browser
AA seq
265 aa
AA seq
DB search
MAMLLRRPLRALTLPLLRPHLSTAAAAEVSPADHHPDLLSPPFGYLPGHPRPDAKHDELI
LAVPRASPGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLVSVQSKQIRKLVDHLGRSFF
LSRLFRLQVWSEHAGQGVLIESVRVLPRKVHLHAGTDEPLNVTFMRAPSSALLKIDVPLM
FIGDDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLMRDLKVHPAL
KLLQSPEQPICSIIGSRAPEQKKSK
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctactccggcgacccctccgggccctcaccctcccgctcctccgcccccac
ctctccaccgccgccgcggcggaggtgtcccccgcggatcaccacccggacctcctgtcg
ccgccgttcggctacctcccgggccacccgcggccggacgcgaagcacgacgagctgatc
ctcgccgtgccgcgggcctccccgggacgccacgtggcggccaaggagcggaaggccggg
cgggtgccggccatcgtgttcgagcaggagaacggccaggaggggggcaacaagcgcctc
gtctccgtccagtcgaagcagatccgcaagctcgtcgaccacctcggccggtccttcttc
ctctcccgcctcttccgcctccaggtctggtccgagcacgccgggcagggggtgctcatc
gagagcgtccgcgtcctgccgcgtaaggtacacttacatgcaggcactgatgagcctctg
aatgtgacattcatgagagccccttcgtcggcactgctcaaaattgatgttcctttgatg
ttcattggggacgatgcgtcacctggtcttaggaaaggagcctacttcaataccataaaa
cgaactgtgaagtatctctgccctgctgacatagtgccaccctacattgaggtggattta
agcgagttggacgtgggccaaaaactgttgatgcgtgatctaaaagtccatccagctctg
aagttacttcagtcaccagaacaacccatctgtagtattatagggtcaagagcacctgaa
cagaagaagtcaaaataa
Oryza sativa japonica (Japanese rice) (RefSeq): 9272292
Help
Entry
9272292 CDS
T01015
Name
(RefSeq) 50S ribosomal protein L25
KO
K02897
large subunit ribosomal protein L25
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
9272292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
9272292
Ribosome [BR:
osa03011
]
Ribosomal proteins
Bacteria
Large subunit
9272292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_TL5_C
Ribosomal_L25p
Motif
Other DBs
NCBI-GeneID:
9272292
NCBI-ProteinID:
XP_015628038
UniProt:
Q10GV3
LinkDB
All DBs
Position
3:complement(23135336..23140247)
Genome browser
AA seq
239 aa
AA seq
DB search
MALCLRRAAAAAVGEALRRGASTAPWRRAASASYHHTIQALPRETAGPRAAARERRSGRV
PAVLLALAGAGPGEGVAHRKLLTADRKQLGEILKQSPYFLSTPVRLQVRAGERSTAVVHS
GTVLPIKVHRDETTGNILNLVLVEADEGTMLKVNLPVEFKGEDVCPGLKKGGFLQKIRTS
LVYLCPAEHIPPKIEVDLANLDIGDRVSMNDIPVHPSLRLLSKNETMPVCKILASKPVE
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcgctttgcctccgccgcgccgccgccgccgccgtcggagaggcgctccgccgcggc
gcttcgacggcgccgtggaggcgggcggcctcggcgtcgtaccaccacacgatccaggcg
ttgccgcgggagacggccggcccgcgcgcggcggcgcgggagcgccgcagcggccgcgtc
ccggccgtgctactcgccctcgccggcgccggccccggggagggggtggcccaccggaag
ctcctcaccgccgacaggaagcagctcggggagattctgaagcagtccccctacttcctc
tccacccccgtccgcctccaggtccgcgccggcgagcgatccaccgccgtcgtgcactcc
ggcactgtcctccctatcaaggtgcatagagacgaaacaacaggaaatatattgaacttg
gtgctggtggaggcagatgaaggaacaatgctgaaggtgaacttgcctgtagagttcaag
ggggaggacgtctgccctgggttgaagaaaggcggctttttgcagaaaataaggaccagc
ttggtgtatctctgccctgctgagcacatccctccaaaaattgaggtggacctggcaaat
cttgacattggagatagggtatcaatgaatgacatccccgtccatccgtcgttgaggtta
ctgagtaaaaacgagaccatgcctgtctgcaagatcttggcctcgaaaccagttgagtag
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integrated database retrieval system
