KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4326849
Entry
4326849           CDS       T01015                                 
Name
(RefSeq) dihydrolipoyl dehydrogenase 1, chloroplastic
  KO
K00382  dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00010  Glycolysis / Gluconeogenesis
osa00020  Citrate cycle (TCA cycle)
osa00260  Glycine, serine and threonine metabolism
osa00280  Valine, leucine and isoleucine degradation
osa00310  Lysine degradation
osa00380  Tryptophan metabolism
osa00620  Pyruvate metabolism
osa00630  Glyoxylate and dicarboxylate metabolism
osa00640  Propanoate metabolism
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
osa01200  Carbon metabolism
osa01240  Biosynthesis of cofactors
Module
osa_M00009  Citrate cycle (TCA cycle, Krebs cycle)
osa_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
osa_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
osa_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
osa_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    4326849
   00020 Citrate cycle (TCA cycle)
    4326849
   00620 Pyruvate metabolism
    4326849
   00630 Glyoxylate and dicarboxylate metabolism
    4326849
   00640 Propanoate metabolism
    4326849
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    4326849
   00280 Valine, leucine and isoleucine degradation
    4326849
   00310 Lysine degradation
    4326849
   00380 Tryptophan metabolism
    4326849
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    4326849
Enzymes [BR:osa01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     4326849
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   4326849
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_binding_2 GIDA FAD_oxidored Lys_Orn_oxgnase Pyr_redox_3 Thi4 UDPG_MGDP_dh_N DAO
Other DBs
NCBI-GeneID: 4326849
NCBI-ProteinID: XP_015625013
UniProt: A0A0N7KCW5 Q94CN9
LinkDB
Position
1:13272604..13282036
AA seq 561 aa
MYSTAISLSAAATAAAAVGGARPGAIRPAELRFCGLRREALGLRSLRAPPRAAATPRKAA
AATGNGAAGSGGFDYDLVIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPS
KALLAVSGRMRELQDEHHMKSLGLQVSTAGYDRQAVADHANNLASKIRSNLTNSMKALGV
DILTGFGTIVGKQKVRYGKVGFPDNEITARNIIIATGSVPFVPNGIEIDGKTVFTSDHAL
KLESVPDWIAIVGSGYIGLEFSDVYTALGSEVTFVEALDQLMPGFDPEIAKLAQRILINP
RKIDYHTGVFASKITPAKDGKPVLIELIDAKTKEHKETLEVDAALIATGRAPFTKGLGLE
NVNVVTQRGFVPVDERMQVMDADGNAVPNLYCIGDANGKLMLAHAASAQGISVVERISGK
DNILNHLSIPAACFTHPEISMVGLTEPQAREKADKEGFEISVVKTSFKANTKALAENEGD
GLAKMIYRPDTGEILGVHILGLHAADLIHEASNAIALGTRVQDIKFAVHAHPTLSEVLDE
LFKAAKVNAGVPHSVNEPVAA
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgtactccacggctatctcgctctccgccgccgccaccgccgccgcggcggtcggcggc
gcccggccaggcgcgatccggccggcggagctccgcttctgcggcctccgccgcgaggcc
ctcgggctccgctcgctgcgggccccgccgcgagcggccgccacgccgcggaaggcggcg
gcggctactgggaatggtgcggccgggagcggcgggttcgactacgacctcgtgatcatt
ggggcgggcgtcggcgggcacggcgcagctctccacgccgtcgagaagggtctgaaaact
gccataattgagggggatgttgtaggtgggacttgtgtgaacagaggttgtgttccgtcg
aaggcacttcttgctgtcagcggtcggatgagggaacttcaagatgaacaccacatgaaa
tcgttgggtctacaggtttcaacagctggatatgataggcaggctgttgcagatcatgca
aataatctggcctctaaaattcgtagcaacttgactaattcgatgaaagctttgggtgtg
gatatattgactggttttggcaccattgtgggaaaacaaaaagtgagatatggaaaagtt
ggttttcctgacaatgaaatcactgccagaaatatcattattgcaacggggtctgttcct
tttgtccccaatggcatcgaaatagatggtaaaaccgtatttactagtgatcatgcacta
aaacttgagtcagttcctgactggattgctatcgtgggaagcggttacattggactggaa
ttcagtgatgtatacacggctctgggaagtgaggttacttttgttgaagcacttgatcag
ttgatgcctggttttgatcctgagattgcaaaattggcccaaaggattcttatcaatcct
cgtaaaattgactatcatactggggtctttgcgagcaagattaccccagcaaaggatggt
aaacccgtgttgattgagttaattgatgctaagacaaaggaacacaaggaaacacttgag
gtggatgcagctctcatagctaccggaagggcaccgttcaccaaagggcttggcttggaa
aatgtcaacgttgttacacaacgcggttttgttcctgttgatgagcggatgcaagttatg
gacgcagatggcaatgcggttccaaatttgtattgtattggagatgccaatggcaaactc
atgctggctcatgctgccagtgcacaaggaatctcagttgttgagcgaatctctgggaaa
gacaacatcctaaatcatctaagcatcccggctgcctgtttcactcatccggagattagt
atggttgggctaacagagccacaagcgagagaaaaggctgataaggaaggatttgagata
agtgttgttaagaccagcttcaaggcaaacacgaaggctctggctgagaatgaaggagat
ggacttgctaagatgatttaccggcctgacactggagaaattcttggagttcacatatta
ggtttgcatgctgctgacctcatccacgaggcatcaaacgccattgccctcggaactcgt
gtacaagacatcaagtttgctgttcatgcacacccaactttgtctgaggttctggatgag
ctcttcaaagctgccaaggttaatgcaggtgttcctcattccgtaaatgagcccgtcgca
gcctag

KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4326980
Entry
4326980           CDS       T01015                                 
Name
(RefSeq) dihydrolipoyl dehydrogenase 1, mitochondrial
  KO
K00382  dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00010  Glycolysis / Gluconeogenesis
osa00020  Citrate cycle (TCA cycle)
osa00260  Glycine, serine and threonine metabolism
osa00280  Valine, leucine and isoleucine degradation
osa00310  Lysine degradation
osa00380  Tryptophan metabolism
osa00620  Pyruvate metabolism
osa00630  Glyoxylate and dicarboxylate metabolism
osa00640  Propanoate metabolism
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
osa01200  Carbon metabolism
osa01240  Biosynthesis of cofactors
Module
osa_M00009  Citrate cycle (TCA cycle, Krebs cycle)
osa_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
osa_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
osa_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
osa_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    4326980
   00020 Citrate cycle (TCA cycle)
    4326980
   00620 Pyruvate metabolism
    4326980
   00630 Glyoxylate and dicarboxylate metabolism
    4326980
   00640 Propanoate metabolism
    4326980
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    4326980
   00280 Valine, leucine and isoleucine degradation
    4326980
   00310 Lysine degradation
    4326980
   00380 Tryptophan metabolism
    4326980
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    4326980
Enzymes [BR:osa01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     4326980
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   4326980
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored Pyr_redox_3 GIDA FAD_binding_2 NAD_binding_8 AlaDh_PNT_C DAO Thi4 HI0933_like 3HCDH_N FAD_binding_3 UDPG_MGDP_dh_N Lycopene_cycl Trp_halogenase
Other DBs
NCBI-GeneID: 4326980
NCBI-ProteinID: XP_015611017
UniProt: A0A0P0V236
LinkDB
Position
1:complement(12654851..12658470)
AA seq 503 aa
MALAILARRRAAEALLRRPLGAAGVSALRASYAAVAGEESDVVVVGGGPGGYVAAIKAAQ
LGLKTTCIEKRGTLGGTCLNVGCIPSKALLHSSHMYHEAKSSFAHHGVKFSNLEVDLPAM
MAQKDKAVAGLTKGIEGLFKKNKVTYVKGFGKLASPSEVSVDLSDGGSTVVKGKNIIIAT
GSDVKSLPGVTIDEKKIVSSTGALCLSEIPKKLVVIGAGYIGLEMGSVWNRLGSEVTVVE
FAPDIVPSMDGEVRKQFQRMLEKQKMKFMLKTKVVGVDTSGDGVKLTLEPAAGGEQSVIE
ADIVLVSAGRVPYTAGIGLESVGVETDKAGRILVDKRFMTNVNGVYAIGDAIPGPMLAHK
AEEDGVACVEFIAGKEGHVDYDTVPGVVYTHPEVASVGKTEEQVKALGIPYRVGKFPLLA
NSRAKAIDDAEGLVKVVAEKETDKILGVHIMAPGAGEIIHEAVLALQYGASSEDIARTCH
AHPTVSEALKEACLQTFTKAIHI
NT seq 1512 nt   +upstreamnt  +downstreamnt
atggcgctcgcaatcctggcgaggaggcgggcggcggaggcgctgctgcggcggccgctg
ggggcggcgggggtgtcggcgctgagggcgtcgtacgcggcggtggcgggggaggagagc
gacgtggtggtggtgggcggcgggccgggagggtacgtggcggcgatcaaggcggcgcag
ctggggctcaagaccacctgcatcgagaagaggggcaccctcggcgggacatgcctcaac
gtcggctgcatcccctccaaggctctgttgcactcatctcatatgtaccatgaagcaaaa
agttcctttgcacaccatggagtgaaattttccaatctggaggtagacctcccagctatg
atggcacagaaagacaaggctgtggcaggcctgactaaggggattgaaggtctcttcaag
aagaacaaagtgacgtatgtcaaaggctttgggaaacttgcttcgccctcagaggtgtct
gttgatctgagcgatggtggcagcacagttgtcaaagggaaaaacataatcattgctaca
gggtctgatgtaaaatcactccctggagtcacaattgatgagaagaaaatcgtctcatct
actggggccttgtgcttgtcagagattccaaagaaattggtggttattggagcaggttac
attggtctggagatgggttcggtctggaaccgccttggttcagaggtcaccgttgttgaa
tttgccccagatatagttccatcaatggatggtgaagtcaggaagcagttccagcgcatg
ttggagaagcagaagatgaagttcatgctcaagacaaaggtagttggggttgatacctcc
ggagatggtgtgaagctaacacttgaacctgcagctggaggtgagcagagtgtcattgaa
gctgatattgtattggtttctgctggaagagtcccatatactgctggtattgggttggaa
agtgttggtgttgagacagacaaagctggcaggatcctcgtggataagcgcttcatgact
aacgtcaatggagtctatgcaattggggatgccatccctgggcccatgcttgcccacaaa
gctgaagaggatggtgttgcctgtgttgagttcattgctggcaaggaggggcacgtcgac
tatgacacagtgcctggtgtggtctatacacatccagaggtcgcgtctgttggaaagact
gaagagcaggtgaaagctttaggaattccctaccgtgttggcaaatttccgctgttggca
aacagccgtgcaaaggccattgacgatgctgagggcttggtgaaggtggtggctgagaag
gaaactgacaagattctgggcgtgcatatcatggctcccggtgctggagagataatacat
gaggctgtccttgctttgcagtatggagcatcaagtgaggacatagctcgtacatgccac
gctcatcccaccgtgagcgaagccttgaaggaggcctgcctgcaaaccttcacaaaggcg
attcacatttaa

KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4335689
Entry
4335689           CDS       T01015                                 
Name
(RefSeq) dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial isoform X1
  KO
K00658  2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00020  Citrate cycle (TCA cycle)
osa00310  Lysine degradation
osa00380  Tryptophan metabolism
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
osa01200  Carbon metabolism
Module
osa_M00009  Citrate cycle (TCA cycle, Krebs cycle)
osa_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    4335689
  09105 Amino acid metabolism
   00310 Lysine degradation
    4335689
   00380 Tryptophan metabolism
    4335689
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.61  dihydrolipoyllysine-residue succinyltransferase
     4335689
SSDB
Motif
Pfam: 2-oxoacid_dh Biotin_lipoyl HlyD_D23 PYNP_C GCV_H
Other DBs
NCBI-GeneID: 4335689
NCBI-ProteinID: XP_015636839
UniProt: A3ATC6 Q7XVM2
LinkDB
Position
4:19378287..19382692
AA seq 440 aa
MASRIASRLLRRSNATLGLIRSYSHARNYSSQLSALIPIGSQSSKLTRRRYYLPNASPYQ
LWSRSFASDNGDQVEAVVPFMGESVTDGTLANFLKKPGDRVEADEPIAQIETDKVTIDVA
SPEAGVIEKFIASEGDTVTPGTKVAIISKSAAPAETHVAPSEDSTPKETPPKAEETKPKL
EEKSPKAEPPKMPLPPKTSPTEPQLPPKERERRVPMPRLRKRIANRLKDSQNTFAMLTTF
NEVDMTNLMKLRSDYKDEFVTKHGVKLGLMSCFVKAAVTALQNQPIVNAVIDGDDIIYRD
YVDISVAVGTSKGLVVPVIRDADNMNFADIEKGINALAKKATEGALSIDEMAGGTFTISN
GGVYGSLISTPIINPPQSAILGMHSIVQRPVVVDGNILARPMMYLALTYDHRLIDGREAV
YFLRRIKDVVEDPRRLLLDI
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggcgtcccgcatcgcctctcgcctcctccgccgctccaacgcgactctaggcctcatc
aggagttattcacatgccaggaactacagcagtcaactttcagctcttattccaattggt
tcccagagctcaaagcttacaagaagacgctattacttgccaaatgcctctccgtaccaa
ctctggagtaggtcatttgcatctgacaatggagaccaggttgaagctgttgtccctttc
atgggtgaatctgtaactgatggaactcttgctaacttcttgaagaaacctggtgacaga
gttgaggctgatgagcccatagcacagattgaaactgataaggttactatagatgttgct
agtccggaagctggtgttattgaaaagttcattgctagcgaaggtgatactgttactcca
ggcaccaaagttgctatcatatcaaagtctgcggcaccagctgaaacacatgttgctccg
tctgaggattcaaccccaaaagaaacgcctccaaaagctgaggagacaaaaccaaaatta
gaagagaagtcaccaaaagcagaacctcccaagatgcctctgccacccaaaacctcccct
acagaaccacagctccctccaaaagaacgagaacggagggtgccaatgccaaggctcagg
aagcgtattgcaaaccgtttgaaggattcacaaaacacatttgcaatgctgaccacattt
aatgaagttgacatgactaatttgatgaagctgcggtctgattataaggatgagtttgtc
accaagcacggtgtcaaattgggtctgatgtcctgctttgtcaaggctgctgttacagca
cttcaaaaccaaccaattgtcaatgctgtcattgatggtgatgacatcatatacagagac
tatgttgacatcagtgttgctgttggtacttccaagggtcttgtggtgcctgttatccga
gatgctgataacatgaactttgcggacattgagaaagggataaacgcccttgcaaagaag
gctactgagggggcactctcaattgatgagatggcaggaggaacattcaccatctctaac
ggtggtgtttacggaagccttatcagcacacctatcatcaaccccccacagtctgctatt
cttggaatgcactccattgtacaacgccctgtggtcgtggacggcaacattctcgcgagg
ccaatgatgtaccttgcgctgacatatgaccacaggctgatcgacggcagagaagctgtc
tacttcctgcgccgcatcaaggacgtggttgaagacccacggagattgctcctcgacata
taa

KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4337862
Entry
4337862           CDS       T01015                                 
Name
(RefSeq) dihydrolipoyl dehydrogenase 1, chloroplastic
  KO
K00382  dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00010  Glycolysis / Gluconeogenesis
osa00020  Citrate cycle (TCA cycle)
osa00260  Glycine, serine and threonine metabolism
osa00280  Valine, leucine and isoleucine degradation
osa00310  Lysine degradation
osa00380  Tryptophan metabolism
osa00620  Pyruvate metabolism
osa00630  Glyoxylate and dicarboxylate metabolism
osa00640  Propanoate metabolism
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
osa01200  Carbon metabolism
osa01240  Biosynthesis of cofactors
Module
osa_M00009  Citrate cycle (TCA cycle, Krebs cycle)
osa_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
osa_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
osa_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
osa_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    4337862
   00020 Citrate cycle (TCA cycle)
    4337862
   00620 Pyruvate metabolism
    4337862
   00630 Glyoxylate and dicarboxylate metabolism
    4337862
   00640 Propanoate metabolism
    4337862
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    4337862
   00280 Valine, leucine and isoleucine degradation
    4337862
   00310 Lysine degradation
    4337862
   00380 Tryptophan metabolism
    4337862
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    4337862
Enzymes [BR:osa01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     4337862
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   4337862
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_binding_2 FAD_oxidored GIDA Lys_Orn_oxgnase Thi4 Pyr_redox_3 UDPG_MGDP_dh_N DAO STALD
Other DBs
NCBI-GeneID: 4337862
NCBI-ProteinID: XP_015637430
LinkDB
Position
5:complement(3313369..3319855)
AA seq 567 aa
MNSAAAAAACASAPAWVVGGGAGGGARSARGPCGIRVCGLGGEAVALRSLRISQGAAVRR
AAVAARAAAENGVAGSGGFDYDLVIIGAGVGGHGAALHAVEEGLKTAIIEGDVVGGTCVN
RGCVPSKALLAVSGRMRELHDEHHMKSLGLQVSSPGYDRQAVADHANNLASKIRSNLTNS
MKALGVDILSGFGAIVGKQKVRYGKVGFPDKEITARNIIIATGSVPFVPKGIEVDGKTVF
TSDHALKLESVPDWIAIVGSGYIGLEFSDVYTALGSEVTFVEALDQLMPGFDPEIAKLAQ
RVLINPRNIDYHTGVFASKITPAKDGKPVQIELIDAKTKEHKETLEVDAALIATGRAPFT
KGLGLENINVVTQRGFIPVDERMRVMDADGNVVPNLYCIGDANGKLMLAHAASAQGISVV
EQISGRDHILNHLSIPAACFTHPEISMVGLTEPQAREKADKEGFEISVVKTSFKANTKAL
AENEGDGLAKLIYRPDTGEILGVHILGLHAADLIHEASNAIALGTRLQDIKFAVHAHPTL
SEVLDELFKAAKVNSGVSHSVNEPVAA
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgaactccgcggcggcggcggcggcgtgcgcctcggccccggcgtgggtggtcggcggc
ggcgccggcgggggagccagatccgcgcgggggccatgcgggatcagggtgtgcgggctc
gggggcgaggcggtggcgctccgctcgctgcggatctcgcagggggcggcggtgaggcgg
gcggcggtggcggcgagggcggccgcggagaacggcgtggcggggagcggcgggttcgac
tacgacctcgtcatcatcggcgccggcgttggtgggcacggcgcggcgctccacgctgtc
gaggagggtttgaaaactgcaattattgagggagatgttgtaggtgggacttgtgtaaac
agaggttgtgtcccatcaaaagcacttcttgctgtcagcggtcgcatgagggagcttcat
gatgaacatcacatgaagtcattgggtctacaggtttcatcccctggatatgacagacaa
gctgttgctgatcatgcaaacaatctcgcctctaaaatccgaagcaacttgactaattca
atgaaagctctgggagtggatatattgagtggttttggtgcaattgttggaaaacaaaag
gtacggtatggaaaagttggttttccagacaaagaaatcactgcaaggaatatcatcatt
gctactggatcagttccttttgttcccaagggcatagaggttgatgggaaaactgttttt
accagtgatcatgcactaaaacttgagtctgtcccggactggatagcaatcgttggaagt
ggatacattgggcttgaattcagtgatgtatatacagctcttggaagtgaggttactttt
gttgaagctcttgaccagctaatgcctggttttgatcctgaaattgcaaaattagcccag
agagtccttatcaaccctcggaatatagactatcacactggtgtttttgcaagcaagatt
actccagcaaaggatggaaaacctgtgcagattgagctcattgatgcaaaaacaaaggaa
cacaaagaaaccctcgaggtggatgcagcccttatagccacaggacgggcaccattcaca
aaaggacttggcttggaaaatatcaatgttgttacacagcgtggttttattcctgttgat
gagcgaatgcgagtcatggatgcagatggcaatgtggttccgaacttatattgcattgga
gatgccaatggtaaactcatgcttgctcatgctgccagtgcacagggaatctctgttgtc
gaacaaatctctgggagggaccacatcctaaatcatttaagcatccccgctgcttgcttc
actcatccagagattagtatggttgggcttacagagccacaagccagagaaaaagctgat
aaagaaggatttgagataagtgttgttaagaccagctttaaggctaatacaaaagcattg
gcagaaaatgaaggagatggacttgctaagttgatttaccggcctgacactggagaaatt
cttggtgtgcacattttgggtttgcacgctgctgacctcatccacgaggcatcaaatgcc
attgccctaggaactcggttgcaagacatcaagtttgctgttcatgcacacccaacattg
tccgaggtgctggacgaactctttaaagcagccaaggttaattcgggtgtttctcattct
gtaaatgaaccagttgcagcctag

KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4337881
Entry
4337881           CDS       T01015                                 
Name
(RefSeq) dihydrolipoyl dehydrogenase, mitochondrial
  KO
K00382  dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00010  Glycolysis / Gluconeogenesis
osa00020  Citrate cycle (TCA cycle)
osa00260  Glycine, serine and threonine metabolism
osa00280  Valine, leucine and isoleucine degradation
osa00310  Lysine degradation
osa00380  Tryptophan metabolism
osa00620  Pyruvate metabolism
osa00630  Glyoxylate and dicarboxylate metabolism
osa00640  Propanoate metabolism
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
osa01200  Carbon metabolism
osa01240  Biosynthesis of cofactors
Module
osa_M00009  Citrate cycle (TCA cycle, Krebs cycle)
osa_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
osa_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
osa_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
osa_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    4337881
   00020 Citrate cycle (TCA cycle)
    4337881
   00620 Pyruvate metabolism
    4337881
   00630 Glyoxylate and dicarboxylate metabolism
    4337881
   00640 Propanoate metabolism
    4337881
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    4337881
   00280 Valine, leucine and isoleucine degradation
    4337881
   00310 Lysine degradation
    4337881
   00380 Tryptophan metabolism
    4337881
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    4337881
Enzymes [BR:osa01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     4337881
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   4337881
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_oxidored FAD_binding_2 NAD_binding_8 AlaDh_PNT_C DAO Thi4 HI0933_like FAD_binding_3 UDPG_MGDP_dh_N 3HCDH_N Lys_Orn_oxgnase Lycopene_cycl
Other DBs
NCBI-GeneID: 4337881
NCBI-ProteinID: XP_015639335
LinkDB
Position
5:3526771..3530399
AA seq 504 aa
MAMASLARRRAAEAALLRRAPAAAWASAWRGYAAAAAGEESDVVVIGGGPGGYVAAIKAA
QLGLKTTCIEKRGTLGGTCLNVGCIPSKALLHSSHMYHEAKASFAHHGIKFSNLEIDLPA
MMSQKDKAVAGLTKGIEGLFKKNKVEYVKGFGKFVSPSEVSVDLLDGGSTTVKGKNIIIA
TGSDVKSLPGVTIDEKKIVSSTGALALSEIPKKLVVIGAGYIGLEMGSVWNRLGSEVTVV
EFASDIVPSMDGEIRKQFQRMLEKQKMKFMLKTKVVGVDTSGSGVKLTVEPAAGGEQSVL
ECDIVLVSAGRVPYTSGLGLNALGVETDKGGRILVDKRFMTNVKGVYAIGDAIPGPMLAH
KAEEDGVACVEFIAGKEGHVDYDTVPGVVYTHPEVASVGKTEEQVKASGVAYQVGKFPLL
ANSRAKAIDDAEGLVKVVAEKETDRILGVHIMAPNAGEIIHEAVLALQYGASSEDIARTC
HAHPTVSEALKEACLQTYLKAIHI
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggcgatggcgagcttggcgaggaggcgcgcggcggaggcggcgctgctgcggcgggcg
ccggcggcggcgtgggcgtccgcgtggagggggtacgcggcggcggcggcgggggaggag
agcgacgtcgtggtgatcggcggcgggccgggcgggtacgtggccgccatcaaggcggcg
cagctagggctcaagaccacctgcatcgagaagaggggaacgctcgggggcacctgcctc
aacgtcggctgcatcccctccaaggctctcctgcattcgtcgcatatgtaccatgaggcc
aaggcttcttttgcacaccatggtatcaaattctcaaatcttgaaatagatttgcctgcc
atgatgtcacagaaagacaaagcagttgctgggctgactaaagggattgaaggcctgttc
aagaagaacaaggttgagtatgtcaaaggatttggaaagtttgtgtccccttcagaggta
tctgttgacttgctcgatggtggtagcactactgttaaagggaagaacataatcattgcc
actggctcagatgtgaaatcactccctggagttacaatagatgagaagaagatcgtgtca
tctactggtgctcttgctctttcagaaataccaaagaagttggtggttattggagctgga
tacattggtttagagatgggttctgtctggaacaggctagggtctgaggtcactgtcgtt
gaattcgcttctgacattgtcccgtcaatggatggagagattaggaagcagttccagcgt
atgctggagaagcagaaaatgaagttcatgcttaagacaaaagttgttggggttgatacc
tctgggagtggtgtcaagttaactgtggagcctgcagctggtggagagcagagtgttctt
gagtgtgatattgttcttgtatctgctggcagagtaccatacacctctggtcttggattg
aacgcccttggtgttgagactgacaagggtggaagaatccttgtcgacaagcgctttatg
acaaatgttaagggtgtttatgcgattggagatgcgatccctggacccatgcttgcacat
aaagctgaagaagatggtgttgcctgtgttgaattcatcgcaggtaaagaaggtcacgta
gattatgacactgtacctggagtggtgtacacacacccagaggtggcttctgttgggaag
acggaagaacaggtcaaggcatcaggagtggcctaccaggttgggaagttccccctgttg
gccaacagccgtgcaaaggcaattgatgatgctgaagggttggtcaaggtagtggctgag
aaggagaccgatagaatcctcggtgtacatataatggcccctaatgcaggtgagataatc
catgaggcggtgcttgcacttcagtatggagcatctagtgaggatattgcacggacatgc
catgcgcatccaacagtgagcgaagccctgaaggaggcttgcctacagacctacctgaag
gcgattcacatttaa

KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 9266803
Entry
9266803           CDS       T01015                                 
Name
(RefSeq) dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial
  KO
K00658  2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00020  Citrate cycle (TCA cycle)
osa00310  Lysine degradation
osa00380  Tryptophan metabolism
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
osa01200  Carbon metabolism
Module
osa_M00009  Citrate cycle (TCA cycle, Krebs cycle)
osa_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    9266803
  09105 Amino acid metabolism
   00310 Lysine degradation
    9266803
   00380 Tryptophan metabolism
    9266803
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.61  dihydrolipoyllysine-residue succinyltransferase
     9266803
SSDB
Motif
Pfam: 2-oxoacid_dh Biotin_lipoyl GCV_H PYNP_C Presenilin
Other DBs
NCBI-GeneID: 9266803
NCBI-ProteinID: XP_015624452
LinkDB
Position
2:18550010..18552700
AA seq 438 aa
MASRIAARHLLRRPATTLCFLRSYKHVRHFSTKLLEGVHGCSLPTCGRYFLSNASPYQPW
TRSFASKNGDLVDAVVPFMGESITDGTLATFLKKPGDRVEADEPIAQIETDKVTMDVASP
EAGIIEKFVASEGGIVTPGVKVAIISKSAAQSKTHTQSSEDTSQKHSTKPPSTKENKVEA
KPPKVESSTTHESKLTSSSEPQLPPKERERRVPMPRLRKRIANRLKDSQNTFAMLITFNE
VDMTNLMKLLSDYKDQFVEKHGVKLGLMSCFVKAAVSALQNQPIVNAVIDGDDIIYREYI
DISVAVGTSKGLVVLVIHDIDAMNFADIEKGINNLAKKATEGAQSINNMAGGTFTISNGG
VYGSLISTPIINSPQSSILGMHSIVQRLVVVNGSVLARPMMYLALMYDHRLIDGREAVLF
LRRIKDVVEDPRRLLLDI
NT seq 1317 nt   +upstreamnt  +downstreamnt
atggcgtcccgtatcgccgcccgccacctcctccgccgccctgcgacgacattatgcttc
ttacggagttataaacatgtcagacatttcagcactaagctacttgaaggtgttcatgga
tgctcactgccaacttgcggacgatatttcctttcaaatgcttctccttatcaaccttgg
actagatcatttgcttcaaagaatggtgacttggttgatgctgttgttcccttcatgggt
gaatccataaccgatggaacccttgccaccttcttaaagaaacctggtgatagagttgaa
gctgatgaacccatagctcagatcgaaactgataaggttacgatggatgttgctagtcca
gaagctgggataattgaaaagttcgttgcgagtgaaggtggcattgttactccaggtgtc
aaagttgctatcatatctaagtctgctgctcaaagcaagacacatacacaatcatctgaa
gatacctcccagaagcatagcacaaaaccaccttctacaaaggaaaacaaggttgaggct
aaaccaccaaaagtagagtccagcacaacacacgaatcaaaactaacttcctcttcagaa
ccacaactccctcctaaggaaagagagagacgggtgccaatgccaaggcttaggaagcgt
atcgcaaatcgtttgaaggattctcagaacacttttgcaatgctaattacattcaatgaa
gttgacatgactaacctaatgaagctactttccgattataaagatcagtttgttgagaag
catggtgtcaaattgggcttaatgtcttgctttgtgaaggctgctgtttctgcgcttcaa
aaccaaccaattgttaatgctgtcattgatggtgatgacatcatctacagggagtacatt
gacatcagtgttgctgttggaacttccaagggtcttgtggtgcttgttatccacgatata
gatgcaatgaattttgctgacatagagaagggtataaacaaccttgcaaagaaggcaact
gagggggcacagtccatcaacaatatggcaggagggacctttaccatctcaaatggtggt
gtttatggaagccttatcagtacacctatcattaattctccacagtcatcaatcctcgga
atgcattccattgttcaacgtcttgtggttgtgaatggcagtgtccttgcaaggccaatg
atgtaccttgcactaatgtatgaccataggctgatcgatggtagggaagctgttctcttc
ttgcgccgtatcaaggatgtggttgaagatccacgaaggttgctccttgacatatag

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