Oryza sativa japonica (Japanese rice) (RefSeq): 4327840
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Entry
4327840 CDS
T01015
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 1
KO
K12184
ESCRT-I complex subunit VPS28
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
4327840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4327840
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osa04147
]
4327840
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
4327840
Exosome [BR:
osa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
4327840
Exosomal proteins of other body fluids (saliva and urine)
4327840
Exosomal proteins of colorectal cancer cells
4327840
Exosomal proteins of bladder cancer cells
4327840
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
Motif
Other DBs
NCBI-GeneID:
4327840
NCBI-ProteinID:
XP_015611162
UniProt:
Q7F3E8
Q94DY4
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All DBs
Position
1:33089176..33090297
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AA seq
213 aa
AA seq
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MEVKLWNDKRERELLESLADLYAIIKATEKLERAYVRDLVSAADYEAECLKLISQFNSLS
SSLAGVVTIPRFVEAYRLDCPAALNRLVQSGVPATVELRAAASSSAPASSAASAAAIAQC
VQSFITAMDAVKLNMLANDQVRPLLHDLSTSMGKLGPVLPPDFEGKVKVSEWLAKLNKMG
AGDELTEQQARQLNFDLDSAYSAFMASLPSTGL
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaagctgtggaacgacaagcgggagcgggagctcctggagagcctcgccgac
ctgtacgccatcatcaaggcgacggagaagctggagcgcgcctacgtccgcgacctcgtc
tccgccgccgactacgaggccgagtgcctcaagctcatctcccagttcaactccctctcc
tcctcgctcgccggcgtcgtcaccatcccccggttcgtcgaggcctaccgcctcgactgc
cccgccgccctcaaccgcctcgttcagtccggcgtccccgccaccgtcgagctccgcgcc
gcggcgtcctcgtccgcgccggcctcctccgcggcgtccgcggccgccatcgcccagtgc
gtccagagctttattaccgccatggatgccgtcaagctcaacatgctcgccaacgaccag
gtccgccccttgctccacgacctctcgacctccatggggaagctgggccccgtcctgccg
ccggacttcgaagggaaggtcaaggtgagcgagtggctcgccaagctaaataagatgggg
gccggggatgagctcaccgagcaacaggcaaggcagctcaacttcgatctggattcggcg
tacagtgcgttcatggcatcactgcccagcaccggcctatga
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