KEGG   Oryza sativa japonica (Japanese rice): 4327983
Entry
4327983           CDS       T01015                                 
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3
  KO
K10590  E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    4327983
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:osa04121]
    4327983
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     4327983
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  HECT type E3
   4327983
SSDB
Motif
Pfam: HECT Arm HEAT_2 HEAT_EZ
Other DBs
NCBI-GeneID: 4327983
NCBI-ProteinID: XP_015625166
LinkDB
Position
2:complement(join(93476..93541,93637..93756,93854..93982,94062..94130,94223..94303,94394..94498,94599..94829,94926..96458,96921..97013,97738..99148,99445..99566,99740..99979,100782..100943,101031..101198,101286..101402,101527..101637,102180..102926))
AA seq 1834 aa
METRSRKRAAAAAAAAAASSSSSASAPKRTRRSSAASSSSAAAPPPAPAPAPAMDPSPSS
RRRARASASDKGKDPDPSSDPSPPSAPDDDDAVAPFPHSFTSASTALQGLLRRLGAGLDD
LLPSSAAAASSSSTSAQLKRILSGLQSDGDESRQLQSLMQLCEMLSIGTEESLAAFPVDA
FVPILVGLLGPGEDGAGGASPDVMLLAARALANLVDVLPSSCSAVVHYGAIPCFCARLLT
IEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANICRKL
PSDASEFVMEAVPLLTNLLNHHDSKVLEHASVCLTRVAEAFASYPEKLDDLCNHGLVAQS
ASLVSISNSAGQASLSTSTYTGLIRLLSTCASGSLLAAKTLLLLGISGTLKDILSGSGLV
AGASVSPALSRPAEQMFEIVSLADDLLPHLPSGIISLPAYFHVLVKGSSSKKSASTKQDG
TSSTENERSGHERLLREHPELLKQFGMDLLPIMTQVYGSSVNAPIRHKCLSIIGKLMYYS
SAEMIQSLLGTTNISSFLAGILAWKDPQVLIPALQIAEIMMEKLPETFSKLFVREGVVHA
VESLICPESSDMVPSQVLPHDKDNESVMPSHSRRQRRRGAAAPTENSSLDESNTSNPGIA
SSTPCSTEVQNTSLRFAVSDRAKSFKDKYFPSDHESRDLGVTDDLLKLRTLCAKLNSASE
NVVTKAKGKSKALSATHFDISHDVEAQFELIITQILTELSKTNGVSTFEFIRSGVVAALL
DYLSCGTFGKERVSEANLPKLRQQALRRYKSFISVALSIDHERNETPMAFLVQKLQSALC
SLERFPVVLSQSSRIGIGGSRLTSGLSALAQPFKLRLCRGQGEKSLRDYSSNIVLIDPFA
SLAAVEEFLWPRVQRSEAASKPTVPSGNNSESGIPGTAAGASSTAAPAPSGRRPTTRSKS
SAASSGASKKDSQEESTNTAKGKGKAVAKPNSEEPKGPNTRNATRRKAASEKDLEMKRAH
GDSSSEDEELDTSPIEIDDALMIDDDDMSEDEEDDHEVLQDGSLPICVQDGVHDVKLGDT
DDSNIGSASDSQVQPSSGSSTRNIMSRGVDPNTFGSRGAMSFVAATMAGLASVGGRGVRG
SRDRRGLSLGGSINEHNKLIFMAGGKQLSKHLTVYQALQRQLMFEEDDDEKFNGSDLSND
GNRFWGDVFTITYQKADSQAEKVSQGGSTSLNSKSDPSRSISELKGVSLLDSILQAELPC
DLERTNSTYNILALLRVLEGLNQLSPRLRVHAASDDFAEGKITTLDELYRTGAKVPSEEF
VNSKLTPKLARQMQDVLALCSGSLPSWCYQMTKACPFLFPFETRRQYFYSTAFGLSRALN
RLQQQQGDNQNAGGEREIRFGRLQRQKVRVSRNRILDSAAKVMEMFSSQRAVLEVEYFGE
VGTGLGPTLEFYTLLSHELQSVRLGLWRSSSPSDTGMQIDRSASPDDDLAAKELSSDLPD
NGSHLIQAPFGLFPRPWPLTVDASEGSRFSKVIEHFRLVGRVMAKVLQDGRLLDLPLSTA
LYKLILGQELDLFDIISFDAEFGKTLQELQILVERKRFLESTYGMNQLEVTDLRFRGTPI
EDLCLDFTLPGYPDYILKEGEENTIVNIYNLEEYVTLVVDATVKSGIMRQVEAFRSGFNQ
VFDISSLKIFSPEELDYLICGRREIWEPDSLVDNIKFDHGYTAKSPAIVNLLEIMAEFTP
EQQHAFCQFVTGAPRLPPGGLAALNPKLTIVRKHPSSAVNTSNIAGVTESADDDLPSVMT
CANYLKLPPYSTKEVMRKKLLYAILEGRGSFDLS
NT seq 5505 nt   +upstreamnt  +downstreamnt
atggaaacgcgcagccgcaagcgcgccgccgccgcagccgcagcagcagccgcctcctcc
tcctcctcagcctctgctcccaagcgcacccgccgctcctccgctgcctcctcctcctcc
gccgccgctccccctcctgcgcctgcgcctgcacctgcgatggacccctccccttcctcc
cgccgccgggctcgcgcctccgcctccgacaagggcaaggaccccgacccctcctccgac
ccctcccctccctccgcccccgacgacgacgacgccgtcgcccccttcccgcactccttc
acctccgccagcaccgccctccagggcctcctccgcaggctcggcgccggcctcgacgac
ctcctcccctcctccgccgccgccgcctcctcctcctccacctccgcccagctcaagcgg
atcctctccggcctccagtccgatggcgacgagtcgcgccagctccagtctctcatgcag
ctctgcgagatgctctccatcggcaccgaggagtcgctcgctgccttccccgtcgatgcc
ttcgtgcccatcctcgttggccttctcggccccggggaggatggtgcaggcggcgccagc
cccgatgtcatgctgctcgccgcccgtgccctcgccaatctcgtcgacgtcctcccctcc
tcttgctctgccgtcgtgcactatggggctataccctgtttctgtgctcgcctgctcacc
atcgagtacatggacctcgccgagcagtcgctacaagccctcaagaagatctcccaggag
catccaactgcctgtttacgagctggtgcgctaatggctgtcctgtcatatctggacttc
ttctctactggtgttcagagagttgcgttgtctactgctgctaatatatgcaggaagctg
ccatctgatgcgtccgagtttgtcatggaagctgttccgttgctcacgaatctcttgaac
caccatgattctaaggtgctcgaacatgcttctgtttgtttgacacgcgttgcagaggct
tttgcttcttatccagagaaattggatgatttgtgcaatcatgggttggttgctcagtct
gctagcctggtatcaatcagcaactccgcaggccaggcctcgttgagtacatcaacatat
acgggattaattcgtcttctctcaacatgtgcgagtgggtcgcttttagcagccaaaaca
cttcttcttcttggaatcagtggtactcttaaagatattctttcaggttctggtttggtt
gctggagcatcagtctccccagctttgtcaaggcctgctgaacagatgtttgagatagtg
agccttgctgatgatttgcttccacatttgccttcgggaatcatttctttaccagcatac
ttccatgtgcttgttaaaggctcttcttcaaagaaatcagcttccaccaaacaagatggg
acaagttcaacagaaaatgaaaggtcaggacatgagagactattacgtgagcaccctgag
cttctaaagcagttcggtatggacttattacccataatgacgcaggtgtatggctcaagt
gtaaatgcaccgatacgccacaaatgcttatcaatcattggaaaactaatgtactacagc
tctgctgaaatgatccagtccctccttggcacaacaaacatatccagcttcctagcaggc
attcttgcgtggaaagatccgcaagtgttgattcctgctcttcaaatagcagaaattatg
atggaaaaacttcctgagacattctctaagttgtttgtgagggaaggtgtcgttcatgct
gtggagtcgcttatatgtccagaatcctctgatatggtgccttctcaggtattgccacat
gataaagacaatgaatctgtgatgccctcgcattctagacgccagcgccggcgtggtgct
gctgcaccaacagaaaacagctcattagatgaatcaaacacttccaatcctgggattgcc
agctcaacaccatgctctacagaagttcaaaacaccagtcttcgatttgcagttagtgat
cgtgcaaagtcgttcaaagataaatacttcccttctgaccatgaatcaagagatcttgga
gttactgacgatcttcttaaactgagaacactctgtgcaaagttaaattctgcaagtgag
aatgtcgtgacaaaagccaaagggaaatcaaaagcgttaagtgccactcattttgacatc
tcacatgatgtggaggcacaatttgagctgataataacacaaatacttactgagcttagc
aaaactaacggcgtatcaacatttgagttcattagaagcggagttgttgcagcattgctt
gactatttgtcctgtgggacatttggaaaggagagggtatctgaggcaaacctgccaaag
cttcgtcagcaggcgcttaggcgatacaagtcttttatatctgttgccctttctattgac
catgaaaggaatgagactcctatggcttttttggtccaaaaactgcaaagtgctttgtgt
tcattggagcgcttccctgttgtgctcagccagtccagcagaataggtattggaggctcc
cgtttgacttcaggtttgagtgctctagctcagcccttcaagttgcgcctttgtcgaggt
cagggtgaaaaatcacttcgggattattcgtcaaatattgtgcttattgatccctttgcg
agtctagcagctgttgaagagtttctttggcccagagttcagcgtagtgaggctgcttcg
aagcctacagttccatcaggaaataattctgaatctggcatacctggcaccgcagctggt
gcgtcatccacagctgcaccagctccatctggcaggcgtccaacaacaagatcaaaatca
tctgctgcaagtagtggtgcatctaagaaggattctcaggaggaaagcacaaacactgcc
aagggaaaggggaaggctgttgcaaaaccaaactcagaagaaccaaaaggacctaataca
cggaatgctactcgcagaaaagctgcttcagagaaagatctggaaatgaagcgagcacat
ggtgacagcagctctgaggatgaggagcttgacacatctcctattgaaattgatgacgct
ttaatgattgatgatgatgacatgtcagaggatgaagaagatgatcatgaggttctccaa
gatggctctcttcctatttgtgttcaagatggggtgcatgacgtgaaattgggtgacact
gatgactctaacattggttcagcaagtgatagccaagtgcagccctcatctggttccagc
actaggaacatcatgagcaggggagtagatccaaatacctttggttcacgaggtgcaatg
tcatttgttgctgcgacaatggctgggctggcttctgttggtggtcggggggttagaggt
agtcgcgatcgacgtggcctgtcacttggaggtagcataaatgagcacaataaactgata
tttatggctggggggaagcagctcagcaaacatctgactgtgtatcaagctctccaacgt
cagctgatgtttgaagaggatgatgatgagaagtttaatggatctgatttgtcaaatgat
ggaaatcgattttggggtgatgtgttcacgataacataccagaaggctgatagccaggct
gagaaggtatcccaaggtggttccacctcgttgaactcaaaatcagatccttcaagatct
atatctgaattgaaaggtgtttctctccttgatagcatcttacaggcagaactcccatgt
gatctagagagaacaaactcaacttacaacattttagcactattgcgtgtattagagggg
ctcaatcagttgtcccctcgtttaagagtacatgctgcttctgatgattttgctgaggga
aaaatcaccacactggatgagctatatagaactggagccaaggtaccgtcagaagagttt
gttaatagtaagttgacaccaaagcttgctcggcaaatgcaggatgttcttgccctctgt
agtggcagtttaccttcttggtgttaccagatgaccaaagcctgccctttcttgtttccc
tttgaaacaaggagacagtacttttactccacagcatttgggttgtcccgtgctttgaat
cgacttcagcaacaacagggtgacaaccaaaatgctggtggcgaaagggagatccgattt
ggaaggctacaacgtcaaaaagttcgtgtttcccgtaaccgtattctggattctgctgct
aaagttatggagatgttctccagtcagagagctgttcttgaggtagaatactttggtgaa
gttggaacagggcttgggcccactttggagttctatactctcttaagccatgaactccag
agtgttcgccttggattatggagatctagttctccatctgatacgggaatgcaaattgat
aggagcgcaagtcccgacgatgacttggcagccaaagaactcagctcagatttacctgac
aatggcagccacttgatacaagctccctttggattgtttcctcggccttggccacttacc
gttgatgcttcagaaggcagtagattttctaaggtcatcgaacatttccgcttggttggg
cgagtgatggcaaaagttttgcaagatggaagacttttagatttgcctctatcaacagca
ctttataagcttatacttggacaagagctggacttatttgacataatctcatttgatgct
gaattcggaaagacattgcaagaactgcaaattcttgttgaacggaagaggttccttgaa
tccacttatggcatgaatcagctagaagtcacggacttgcgtttccgtggcactcctatc
gaagatttgtgtttagattttactcttccaggttatcctgattatattcttaaagaaggc
gaggaaaacacaattgtaaatatttacaacttggaagagtatgttactttggtagtggat
gctacagttaaatcagggataatgaggcaagtcgaagcatttagatcaggatttaaccag
gtctttgacatctcatccctgaaaatattttcacctgaagagcttgactatctaatatgt
ggtcgccgagaaatttgggagcctgattcattggtggataatataaaatttgatcatggg
tatactgctaaaagtcctgcaattgtaaatctactcgagatcatggctgaattcacccca
gagcaacaacatgcattctgccagtttgtaactggtgctcctcggcttccgcctggtggt
ttagctgcccttaatcccaagcttactatagttaggaagcacccctcaagtgcggtgaat
acttcaaatatcgctggagttacagagtctgcagatgatgatctgccaagtgttatgaca
tgtgctaattatcttaaattgcctccatactccacaaaagaagtgatgcgcaagaaattg
ctttatgcgatcctagaaggccgtggatcatttgatctatcatga

KEGG   Oryza sativa japonica (Japanese rice): 4337658
Entry
4337658           CDS       T01015                                 
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4
  KO
K10590  E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    4337658
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:osa04121]
    4337658
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     4337658
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  HECT type E3
   4337658
SSDB
Motif
Pfam: HECT
Other DBs
NCBI-GeneID: 4337658
NCBI-ProteinID: XP_066166466
LinkDB
Position
5:join(1236615..1236698,1236832..1236948,1237061..1237219,1237642..1237776,1238095..1238247,1238337..1238458,1238578..1239520,1239656..1239707,1239852..1240942,1241037..1241363,1241458..1241538,1241628..1241696,1241788..1241916,1242017..1242100,1242189..1242254)
AA seq 1203 aa
MECPKECLSHGVPAAVLQFFDFFSMHKQKLVLKIVANVLGDFSAKDAAKAMEAAPVLCNL
LQSTDKTILDSAVSCLVLVSDGACDSAQHMEKLYELNAVQATMRLMENDGWKSLSDETLS
GILGLLKDLASLSARAVKSLFELNICDLLKQMITYYTSSHSDHNKVQTLVELIYYLMPPL
EMCDHRTELIIAKKNVITEQSGYIQQLASILTFIIQVAKSAALSSICYSCVVVIRNIVEL
STPSSLVEVQKTVNLSSLLAGWLARKNRHIIFQTLNVSKTLLRKDQKFFFETFIREGLKH
AIDAILTQEKGKSRLPESCLCFDLDLETSTDDACRINNGAILKLAEEIKKNFLVKVAKSP
HKFGCAFKSIKEFFSRLNCHATAPPAKDQDLCKQLSDFSRQLLSDELPSTSTFEFVQSGS
IKHLAGYLSNGTYFNSNLRNCQDLIGELKEVKIRLQKFTHLALSVDNESSVKPLEILVEK
LIDALHVWYDSFPVILADEQCTRESTMIPLRDSGTEEPMSLYIKFSRSAREEELEDYGGV
LPVDLSSTPESIEEVLLPEICKRTGNETSYKENTQEANGSRKSVGLRNGDGHKFSRLKFS
YKGTQLQSSTPLFESILRSMHEGETDLQIDPSFWDKEHKIVYRRRNKSKKISSHSSYNIQ
LCRVHEKLEMSLLKDPFFSTILTGKLPGDLDESDPSYNFLFMLKVLEGLNRFSYHLSMDD
KLCKFAEGCLQEFDDLKVAICPIPRDQFVSSLLTNKLEQQMQDSLFGDGLIPSWCIYLVE
TCPFLLSFEARWKYFCLTAHHSFMTDEASSSTETKKYSVTRSKILEDASSMLNKHGSDTK
FIEVEFDGEVGTGRGPTFEFYTTVSHELQRVGLGMWRGDDTSQECEAGFVHAPFGLFPQP
WSSANTSSQGISLSNVVQKFKLLGHLVARAVLDGRVLDIPLSKAFYKIMLEQDLDIYDIP
SFDPKLGKTVMEFQALVKRKKFLEERASNPAADLSYKNVRLEDLCLDFTLPGNPEYELVP
GGSEKMVTLDNLEEYVSSIVDATLKSGISNQIEAFKAGINKVFALKTLRLFSEDEMERIL
CGEQDSWASNKLEDHINFDYGYDANSASVISFLEILREFGREDQRAFLHFTTGAPQLPLG
GLASLDPKLTVVRKQCDGKVDNELPSVNTCRHFFKLPPYSSKEIMRQKLKYAIKEGLGSF
QLS
NT seq 3612 nt   +upstreamnt  +downstreamnt
atggagtgccccaaggagtgcctcagccacggcgtgccagccgccgtgctgcagttcttc
gacttcttctcgatgcacaagcagaagctggtgctcaagatcgtcgccaacgtcttgggc
gacttcagcgcgaaggatgcggccaaggccatggaggccgcgcccgttctgtgcaacctc
ctgcaatccactgacaagacgatactcgactccgccgtttcttgcttggttttggtctct
gatggtgcttgcgacagtgcccaacacatggaaaagctttacgagcttaatgcagtccaa
gcgacgatgaggttgatggagaacgacgggtggaagagcctcagcgatgagactttatct
ggcatccttggtcttctcaaagacctagcttctctctcagcaagggctgtaaagtctctt
tttgagttaaacatttgtgatttgctcaagcagatgataacatactacacctcgtcgcac
agtgatcacaataaggtgcagacgcttgtagagctcatttattatcttatgccacctctt
gaaatgtgtgaccatcgtaccgaactaatcattgcaaagaagaatgtcatcacagaacaa
agtggatacatccaacagcttgctagcatccttacttttataatacaggttgcgaaatct
gctgcactatcatcaatttgctacagttgtgttgttgtcatcagaaacattgttgaatta
agcacaccttcttccttggtggaggtacagaagacagtaaacctgtcaagcttacttgct
ggctggttggcccggaagaaccgccatatcatattccaaacgctcaacgtttcgaagacc
cttctgagaaaagaccagaaattcttctttgagaccttcatcagggagggtctaaagcat
gcaattgatgcaatactaacacaggaaaaaggaaagagccgcttgccagaaagttgcctt
tgttttgatttagacttggagacctcgacagatgatgcatgcaggattaataatggtgct
atcctgaaactagcggaggagataaagaaaaacttcttggtaaaggttgccaagtctcct
cacaagtttgggtgtgcttttaaaagcataaaggaatttttttctcgtttgaattgtcat
gccacggcacccccagctaaagatcaggatctctgcaagcagttgtctgatttttcaagg
caattattatcggatgaactgccaagtacttctacttttgagtttgtgcagagtggatct
atcaaacatttggcaggttatctttccaatgggacatactttaattcaaatctcaggaat
tgccaggacttgataggggagcttaaggaggtgaaaatccggctgcagaagttcacgcac
ttggctctcagcgtggacaatgaaagctcggtgaagccacttgagattttggtggagaaa
ctgatagatgcgttgcatgtgtggtatgacagtttccctgtaatcctggctgatgaacag
tgcacacgtgagagcaccatgattcctctgagggattcaggaactgaggaaccaatgtca
ctatatataaaattttcgagatcagccagggaggaggagttggaggattatggtggagtt
ctccctgttgatctttcttcgacacctgaatccattgaagaggtcctgttgcctgagatc
tgtaaaagaactggcaatgaaacttcatacaaggaaaacactcaagaagcaaatgggagc
agaaaatctgttgggctcagaaatggtgacgggcacaagttctcaagattgaaattctct
tacaaaggaacacaactccagtcatctacaccactttttgagtcaatcctccgctcaatg
catgaaggagaaaccgatctccagattgacccatctttttgggataaagaacacaagata
gtatacagaagaagaaacaaaagcaagaaaatatcttcccatagttcctacaatattcag
ttgtgccgtgtgcatgaaaaacttgaaatgtcattgcttaaggacccctttttctccacc
atactcactggcaagcttcctggtgatctggatgaatctgatccatcatataacttcctg
ttcatgctgaaagtcctcgaagggctcaaccgtttttcatatcatctatcaatggatgat
aagttatgcaaatttgctgaaggctgcctccaagagtttgatgaccttaaggtggcaatt
tgtccaattccacgggatcagttcgtgagcagtctactgacaaataagttagagcagcaa
atgcaagatagcttgtttggggatggcttgataccctcgtggtgtatctatttggttgaa
acttgcccgttcttgttgtcattcgaagctcgatggaagtatttctgcctgacggcacat
cactcattcatgacagatgaggctagcagttcaacagaaactaagaagtacagcgtaaca
cggagcaaaatccttgaagatgcttcatcgatgttgaacaaacatggatcagacaccaaa
ttcattgaggtggaatttgatggagaggttgggaccggtcgaggcccaaccttcgaattc
tataccacagttagtcatgaactacagagagtgggtcttggaatgtggagaggagacgac
accagccaagaatgcgaagctggttttgtccatgccccttttggtctctttccacagcca
tggtcctcagcaaacacttcatctcaagggatcagtttgtccaatgtggtacaaaaattc
aagcttcttgggcatcttgtagcaagagcagttttggatggaagggttctggatattcct
ctctcgaaagcattttacaagatcatgcttgagcaggaccttgatatttatgacattcca
tcatttgatcccaagttgggcaagactgttatggagtttcaagcacttgttaaaaggaag
aagttcctggaggaaagggcatccaatccagcagctgatttgtcctataaaaacgtgcga
ttggaggatttatgtcttgactttacccttcctggaaatccggaatatgaacttgtccct
ggaggttcagagaagatggtgacacttgacaatttggaggagtatgtgtcttcaattgtt
gatgcaaccttgaaaagtgggatatccaatcaaatagaagctttcaaggctggaattaac
aaggtttttgctcttaagactcttcggttgttcagtgaggatgagatggagcgtatacta
tgtggcgaacaagattcttgggcttcgaacaaacttgaggatcacatcaattttgattat
ggatatgatgcgaacagtgcatcagtaattagtttcctggagatcttgcgggagtttgga
agagaggaccagcgggcgttcttgcattttacgactggagctcctcagctcccacttggt
ggcctagcttcgctcgatcctaagctcaccgtagtgcgaaagcaatgtgatggcaaagta
gacaacgaattaccgagtgtcaatacttgccggcatttcttcaagcttccaccgtactcc
tctaaggagattatgagacagaagctcaaatatgctatcaaggagggtttaggctccttc
caattatcatga

KEGG   Oryza sativa japonica (Japanese rice): 4339037
Entry
4339037           CDS       T01015                                 
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4 isoform X1
  KO
K10590  E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    4339037
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:osa04121]
    4339037
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     4339037
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  HECT type E3
   4339037
SSDB
Motif
Pfam: HECT Arm TrAA12 Adaptin_N HEAT Htt_N-HEAT_1 HEAT_EZ
Other DBs
NCBI-GeneID: 4339037
NCBI-ProteinID: XP_015639719
LinkDB
Position
5:complement(join(22889975..22890040,22890450..22890536,22890613..22890741,22890837..22890905,22890986..22891066,22891313..22891417,22891501..22891731,22891813..22892987,22893106..22893172,22895420..22896521,22896633..22896754,22896834..22896989,22897542..22897700,22897777..22897935,22898021..22898137,22898217..22898327,22898405..22899073))
AA seq 1534 aa
MDRCRKRPDSDPGAPGEADEEHPADKRPCTAEPSTSAAVAPEGEAAAAERACSDMDTSSS
GHAGDGEADGDGDGEGEGDGDDDGDGDGGSSCESDGGGSPRRCGGGGRFQRMVAAVAADG
AEEGAVVAALTELCEALSFCGEDVGGYFPTDAAARALVRLVGGGADGAPAAAASPDVMLL
SVRAITYLCDAMPRAADAVVRHGLLPLLCSRLLAIEYLDVAEQCLQAFEKISQRQPTPCL
QAGMITAVLTYIDFFSASIQRVAVSAAANACKKVPKDCSQFVMDSVPVLCNLLQSEDKMV
VEKVASCLINIVDSFSSSVELLDMFCHQGVIEKVLPLINTGGLTSLSPSTCSNLIGLLAK
LACNSLVAVKSLFELNVGNTISRILVTSDLSHGMPYLPLENQSNQVNEALKLANQLIPSA
ARDVEDTQMVLAKEKIIVDEPRFLCQFSMEILPVLIKAVNSGANSYICYGCASIVKNICY
FSKPEMLQELLKDANIPSFLAGLLSRKDHHVLFSSLKLIEILMQKLPDAYLGSFIKEGVV
YAVEALLMQEDCSKSTNLSDEAQQSENQPIIRNKPTCFCYAFDYPRSDAAETRTCMIGKG
NLFTFARHVKTTYFTTEAVNSEMGLTEILQKLKTCCAVLNDSADKSLNRDNIQNEEHLTD
ILSEVMMELHGGETMTTFEFLESGLIKSLSNYLSNGKYLQLERIPNDYNTEHFLAVLKRF
QSFTQISFSRMEQGWGDMLLTLLVRKLQNALTSLDNFPVIMSHNFKPRNNISDIPTRHST
ITPCIRVRFKKDEDQTNLSSYDNVVNLEISSLLHTIEEFLWPKICTGTSNQKPESSANGT
ASENKYPEDDLQERYSSPESSPPPEGVIIGNQSPSVEPGSNKGPSSSGAGQQETNTSDHA
AQPKLLFSLKGKELDQSVTLYQSILQDQINAGSDIILDNQFWRIVHDVTYRTATNPEIDD
PLKYSSCATTPAHPDKAGYICQTLPFFTSLLLGKLPCKLDRSSPSYDILFMLKVLEGLNR
YSFHLVSDERNRAFVHGSITDLDDLKVDVSVVPQQEFVSAKLTDKLEQQMHDPLVLRSRC
LPLWCTELMSACPFLFSFEARWKYFQLTAFGSLTPQHGNMMDTSGSGVMTERVPSFSRKK
FKVDRDNILVSAAKVMQSHARSNAMLEVEYEEEVGTGLGPTMEFYTLISHEFQKSGLGMW
RGELSGEAGLDNVHGGSVFVVAPNGLFPKPWSTHVDCSSFSEVNKQFHLLGQVVAKAVKD
NRILDIPFSKAFYRLILGQELNIYDIHSFDPELAMTLMEFKALAARRKYLESSSSGDCKS
TSDLSYRGCRIEDLAIEFALPGYPEYVLSLENSLDNVSADNLEQYVSFVVDATIRSGIAR
QLEAFKSGFNEVFPLSMLQVFSEDELERLLCGEQDTWDFAKLVDHIKFDHGYTSSSPPVI
NLLEVIQEFEGHQRRAFLQFITGSPRLPPGGLAALNPKLTVVRKQHNSNEADDDLPSVMT
CANYLKLPPYSSKDKMREKLLYAITEGQGSFHLS
NT seq 4605 nt   +upstreamnt  +downstreamnt
atggatcgctgccggaagcggcccgactccgaccctggcgctcccggcgaggcggacgag
gagcaccccgccgataagcgcccctgcactgccgagccgtcgacctcggcggcggtggcg
ccggagggggaggcggcggcggcggagcgcgcctgctcggatatggacacatcatcgtct
ggacacgcaggggatggggaagcggatggggatggggatggggaaggggaaggggatggt
gacgatgatggggatggggacggggggtcgtcgtgcgagtcggatgggggagggagcccg
aggaggtgcggcgggggagggaggttccagcggatggtggcggcggtggcggcggacggc
gcggaggagggggcggtggtggcggcgctgacggagctctgcgaggcgctctccttctgc
ggggaggacgtcgggggatacttcccgacggacgccgcggcgcgggcgctggtgcggctg
gtcgggggcggcgccgatggcgcgccggcggcggcggcgagccccgacgtgatgctgctc
tccgtgcgcgccatcacgtacctctgcgacgcgatgccgcgcgccgccgacgccgtcgtc
cgccacggcctgctccccctgctctgctcccgtctcctcgccatcgagtaccttgatgtc
gctgagcagtgcttgcaagcattcgagaagatatcgcagaggcagccgacgccgtgcttg
caggctggcatgatcactgctgtgctcacgtacattgacttcttctctgcaagtatccag
agggttgcggtctcagctgctgcgaatgcctgtaagaaggtccccaaagattgctcccaa
tttgtgatggattctgtgccagtgttgtgtaatctactgcagtctgaggacaagatggta
gtggagaaggttgcaagttgcttgataaacatcgtggattcatttagtagttcagtggag
cttctcgacatgttctgtcaccagggtgtgatagagaaagtcctgcctctgatcaatact
ggcgggctaacttctcttagcccatcaacatgcagtaacttgattgggcttctcgccaag
ctagcctgcaattcacttgtggctgtgaagtctctctttgagctgaatgttggtaacacc
ataagcagaattctggttacttcagatctctcacatggcatgccttacctgcctttggaa
aaccaaagcaaccaggtcaatgaagctttgaaattagcaaaccaacttattccttctgca
gcaagagatgttgaagatacccagatggtacttgcaaaagaaaaaataattgtagatgaa
ccaaggtttttgtgtcagttctctatggagattcttcctgtcttgatcaaggcagtcaac
tctggtgcaaattcatacatttgctatggatgtgcttcaattgtaaaaaacatctgttat
ttcagtaaacctgaaatgcttcaagagttgctcaaggatgcgaacataccaagtttcttg
gctggtttattgtctcggaaggatcatcatgtgctattctcatcactaaagcttatcgaa
attctcatgcaaaagcttcctgatgcttaccttggatcctttatcaaggaaggtgttgtc
tatgcagttgaggctcttcttatgcaagaagattgttcaaagtctactaatctctcagat
gaagcacaacaatcagagaatcagcctatcataagaaataagcctacatgtttctgctat
gcatttgattatcccagatctgatgctgctgaaacaaggacttgcatgattggaaagggc
aacctttttactttcgcaaggcatgtgaagacaacctatttcactaccgaagcagtgaac
tctgagatgggtttgacagagattttgcaaaagctcaaaacttgctgcgcagttctgaac
gattctgctgataagtcattaaaccgagacaatatacaaaatgaagagcacttgactgac
attttaagtgaggtgatgatggagcttcatgggggagaaacaatgactacctttgaattt
cttgagagtggattgatcaaatccttgtctaactatctctccaatggcaagtacctccaa
ttggagagaatcccaaatgattacaatactgaacattttcttgccgtgctaaaaaggttt
cagtcatttactcagatatctttttcaagaatggagcagggctggggtgatatgctcttg
acactgttagtaaggaaactgcagaatgctcttacttctcttgacaacttcccagtgata
atgagccataatttcaagccgaggaacaatatttcagatatccctactaggcactcaacg
attactccatgtatccgagttcgatttaagaaggatgaagatcaaaccaacttgtcgagc
tatgataatgttgttaatttggagatctcttccttgttgcacactattgaagagttcttg
tggcccaaaatttgtacaggcacaagcaatcagaagcctgaatcatcggccaatggtact
gcttctgaaaacaaatatcctgaagatgacctccaggaaagatattcctcacccgaatca
tcccctccaccagagggtgttataataggaaatcaaagtccatctgtagaaccaggctca
aataaagggccttcgtcatctggtgcaggccaacaagagacaaacacaagtgatcatgct
gcgcaaccaaaattgttatttagcttgaaaggaaaagagcttgaccaatctgttactctg
tatcaatcaatcctgcaggatcagattaatgcaggttctgacataatattggacaaccag
ttttggcgcattgtgcatgatgtaacatatagaacggctacaaacccagaaattgatgat
cctcttaagtattcatcttgtgcaacaacaccagcacatcccgataaagctggatatatt
tgtcagacgctccctttcttcactagcctgttgcttggcaaacttccttgcaaacttgac
agatcaagtccatcatatgacatattgtttatgctaaaagttctagaggggttgaaccga
tactcttttcacctcgtctctgatgagagaaaccgtgcttttgtacatggaagcataact
gaccttgatgatctgaaagttgatgtttctgtagttccacagcaggagtttgtcagtgct
aaattgacagataaactggagcaacagatgcatgatcccttggttttaaggtctcgttgc
ctgcctttatggtgcactgaactgatgtctgcatgtcccttcttgttttcttttgaggca
agatggaagtatttccagctgacagcatttggttctttgaccccacaacatgggaatatg
atggatacaagtggcagtggtgtaatgacagaaagggtgccttccttctcacggaaaaag
ttcaaagttgatcgcgacaatatacttgtttctgctgctaaagtgatgcaatcacatgct
cggagtaatgcaatgcttgaagtagaatatgaagaggaagtaggcacaggcttgggtcct
acgatggaattctatacattgataagtcatgagtttcagaagtctggtttaggcatgtgg
agaggggagctctccggcgaagctggcctggataatgttcatggtggttctgtatttgtg
gttgcccctaatggactttttcctaaaccatggtccacccatgtggattgttcttccttc
tcagaagtgaataaacagttccacctccttggtcaggtcgttgcaaaggcagttaaagac
aacagaattctcgacattccattttctaaagcattttacaggcttatactaggacaggaa
cttaatatatatgacattcactcatttgatcctgaactagcaatgacccttatggagttt
aaagcacttgctgctcggagaaaatatttagaatcaagttcaagtggggactgcaagagt
acatctgatttgtcttatcgaggttgcaggattgaggatcttgctattgagttcgctctt
ccaggatatccagaatatgttctttctttagaaaatagcttggataatgtaagtgctgac
aatttagaacagtatgtttcttttgttgttgatgcaacaattagaagtggaattgcaaga
cagctggaagcttttaagtcaggattcaatgaggtatttccattaagcatgctccaggtc
ttctcagaggatgagctggagcgattactctgcggtgaacaagatacgtgggattttgcg
aaacttgtggatcatataaagtttgatcatggctacacttccagcagccctcctgtcatt
aatttgttggaggttatacaggagtttgaaggccatcaacgcagagctttcttgcaattt
ataacaggttcacctcgactcccaccgggtgggttagctgcgctaaatccgaagttgacg
gttgtccgaaagcagcataacagcaacgaggctgatgatgaccttccgagtgtgatgact
tgtgctaattatctaaagttacccccctattcttccaaggacaagatgagggagaaacta
ctctacgcgattacggaaggtcaggggtccttccacttatcttga

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