Oryza sativa japonica (Japanese rice) (RefSeq): 4327983
Help
Entry
4327983 CDS
T01015
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4327983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4327983
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
4327983
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
HECT type E3
4327983
BRITE hierarchy
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
HEAT_EZ
HEAT_2
Motif
Other DBs
NCBI-GeneID:
4327983
NCBI-ProteinID:
XP_015625166
LinkDB
All DBs
Position
2:complement(86700..96874)
Genome browser
AA seq
1834 aa
AA seq
DB search
METRSRKRAAAAAAAAAASSSSSASAPKRTRRSSAASSSSAAAPPPAPAPAPAMDPSPSS
RRRARASASDKGKDPDPSSDPSPPSAPDDDDAVAPFPHSFTSASTALQGLLRRLGAGLDD
LLPSSAAAASSSSTSAQLKRILSGLQSDGDESRQLQSLMQLCEMLSIGTEESLAAFPVDA
FVPILVGLLGPGEDGAGGASPDVMLLAARALANLVDVLPSSCSAVVHYGAIPCFCARLLT
IEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANICRKL
PSDASEFVMEAVPLLTNLLNHHDSKVLEHASVCLTRVAEAFASYPEKLDDLCNHGLVAQS
ASLVSISNSAGQASLSTSTYTGLIRLLSTCASGSLLAAKTLLLLGISGTLKDILSGSGLV
AGASVSPALSRPAEQMFEIVSLADDLLPHLPSGIISLPAYFHVLVKGSSSKKSASTKQDG
TSSTENERSGHERLLREHPELLKQFGMDLLPIMTQVYGSSVNAPIRHKCLSIIGKLMYYS
SAEMIQSLLGTTNISSFLAGILAWKDPQVLIPALQIAEIMMEKLPETFSKLFVREGVVHA
VESLICPESSDMVPSQVLPHDKDNESVMPSHSRRQRRRGAAAPTENSSLDESNTSNPGIA
SSTPCSTEVQNTSLRFAVSDRAKSFKDKYFPSDHESRDLGVTDDLLKLRTLCAKLNSASE
NVVTKAKGKSKALSATHFDISHDVEAQFELIITQILTELSKTNGVSTFEFIRSGVVAALL
DYLSCGTFGKERVSEANLPKLRQQALRRYKSFISVALSIDHERNETPMAFLVQKLQSALC
SLERFPVVLSQSSRIGIGGSRLTSGLSALAQPFKLRLCRGQGEKSLRDYSSNIVLIDPFA
SLAAVEEFLWPRVQRSEAASKPTVPSGNNSESGIPGTAAGASSTAAPAPSGRRPTTRSKS
SAASSGASKKDSQEESTNTAKGKGKAVAKPNSEEPKGPNTRNATRRKAASEKDLEMKRAH
GDSSSEDEELDTSPIEIDDALMIDDDDMSEDEEDDHEVLQDGSLPICVQDGVHDVKLGDT
DDSNIGSASDSQVQPSSGSSTRNIMSRGVDPNTFGSRGAMSFVAATMAGLASVGGRGVRG
SRDRRGLSLGGSINEHNKLIFMAGGKQLSKHLTVYQALQRQLMFEEDDDEKFNGSDLSND
GNRFWGDVFTITYQKADSQAEKVSQGGSTSLNSKSDPSRSISELKGVSLLDSILQAELPC
DLERTNSTYNILALLRVLEGLNQLSPRLRVHAASDDFAEGKITTLDELYRTGAKVPSEEF
VNSKLTPKLARQMQDVLALCSGSLPSWCYQMTKACPFLFPFETRRQYFYSTAFGLSRALN
RLQQQQGDNQNAGGEREIRFGRLQRQKVRVSRNRILDSAAKVMEMFSSQRAVLEVEYFGE
VGTGLGPTLEFYTLLSHELQSVRLGLWRSSSPSDTGMQIDRSASPDDDLAAKELSSDLPD
NGSHLIQAPFGLFPRPWPLTVDASEGSRFSKVIEHFRLVGRVMAKVLQDGRLLDLPLSTA
LYKLILGQELDLFDIISFDAEFGKTLQELQILVERKRFLESTYGMNQLEVTDLRFRGTPI
EDLCLDFTLPGYPDYILKEGEENTIVNIYNLEEYVTLVVDATVKSGIMRQVEAFRSGFNQ
VFDISSLKIFSPEELDYLICGRREIWEPDSLVDNIKFDHGYTAKSPAIVNLLEIMAEFTP
EQQHAFCQFVTGAPRLPPGGLAALNPKLTIVRKHPSSAVNTSNIAGVTESADDDLPSVMT
CANYLKLPPYSTKEVMRKKLLYAILEGRGSFDLS
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcgcagccgcaagcgcgccgccgccgcagccgcagcagcagccgcctcctcc
tcctcctcagcctctgctcccaagcgcacccgccgctcctccgctgcctcctcctcctcc
gccgccgctccccctcctgcgcctgcgcctgcacctgcgatggacccctccccttcctcc
cgccgccgggctcgcgcctccgcctccgacaagggcaaggaccccgacccctcctccgac
ccctcccctccctccgcccccgacgacgacgacgccgtcgcccccttcccgcactccttc
acctccgccagcaccgccctccagggcctcctccgcaggctcggcgccggcctcgacgac
ctcctcccctcctccgccgccgccgcctcctcctcctccacctccgcccagctcaagcgg
atcctctccggcctccagtccgatggcgacgagtcgcgccagctccagtctctcatgcag
ctctgcgagatgctctccatcggcaccgaggagtcgctcgctgccttccccgtcgatgcc
ttcgtgcccatcctcgttggccttctcggccccggggaggatggtgcaggcggcgccagc
cccgatgtcatgctgctcgccgcccgtgccctcgccaatctcgtcgacgtcctcccctcc
tcttgctctgccgtcgtgcactatggggctataccctgtttctgtgctcgcctgctcacc
atcgagtacatggacctcgccgagcagtcgctacaagccctcaagaagatctcccaggag
catccaactgcctgtttacgagctggtgcgctaatggctgtcctgtcatatctggacttc
ttctctactggtgttcagagagttgcgttgtctactgctgctaatatatgcaggaagctg
ccatctgatgcgtccgagtttgtcatggaagctgttccgttgctcacgaatctcttgaac
caccatgattctaaggtgctcgaacatgcttctgtttgtttgacacgcgttgcagaggct
tttgcttcttatccagagaaattggatgatttgtgcaatcatgggttggttgctcagtct
gctagcctggtatcaatcagcaactccgcaggccaggcctcgttgagtacatcaacatat
acgggattaattcgtcttctctcaacatgtgcgagtgggtcgcttttagcagccaaaaca
cttcttcttcttggaatcagtggtactcttaaagatattctttcaggttctggtttggtt
gctggagcatcagtctccccagctttgtcaaggcctgctgaacagatgtttgagatagtg
agccttgctgatgatttgcttccacatttgccttcgggaatcatttctttaccagcatac
ttccatgtgcttgttaaaggctcttcttcaaagaaatcagcttccaccaaacaagatggg
acaagttcaacagaaaatgaaaggtcaggacatgagagactattacgtgagcaccctgag
cttctaaagcagttcggtatggacttattacccataatgacgcaggtgtatggctcaagt
gtaaatgcaccgatacgccacaaatgcttatcaatcattggaaaactaatgtactacagc
tctgctgaaatgatccagtccctccttggcacaacaaacatatccagcttcctagcaggc
attcttgcgtggaaagatccgcaagtgttgattcctgctcttcaaatagcagaaattatg
atggaaaaacttcctgagacattctctaagttgtttgtgagggaaggtgtcgttcatgct
gtggagtcgcttatatgtccagaatcctctgatatggtgccttctcaggtattgccacat
gataaagacaatgaatctgtgatgccctcgcattctagacgccagcgccggcgtggtgct
gctgcaccaacagaaaacagctcattagatgaatcaaacacttccaatcctgggattgcc
agctcaacaccatgctctacagaagttcaaaacaccagtcttcgatttgcagttagtgat
cgtgcaaagtcgttcaaagataaatacttcccttctgaccatgaatcaagagatcttgga
gttactgacgatcttcttaaactgagaacactctgtgcaaagttaaattctgcaagtgag
aatgtcgtgacaaaagccaaagggaaatcaaaagcgttaagtgccactcattttgacatc
tcacatgatgtggaggcacaatttgagctgataataacacaaatacttactgagcttagc
aaaactaacggcgtatcaacatttgagttcattagaagcggagttgttgcagcattgctt
gactatttgtcctgtgggacatttggaaaggagagggtatctgaggcaaacctgccaaag
cttcgtcagcaggcgcttaggcgatacaagtcttttatatctgttgccctttctattgac
catgaaaggaatgagactcctatggcttttttggtccaaaaactgcaaagtgctttgtgt
tcattggagcgcttccctgttgtgctcagccagtccagcagaataggtattggaggctcc
cgtttgacttcaggtttgagtgctctagctcagcccttcaagttgcgcctttgtcgaggt
cagggtgaaaaatcacttcgggattattcgtcaaatattgtgcttattgatccctttgcg
agtctagcagctgttgaagagtttctttggcccagagttcagcgtagtgaggctgcttcg
aagcctacagttccatcaggaaataattctgaatctggcatacctggcaccgcagctggt
gcgtcatccacagctgcaccagctccatctggcaggcgtccaacaacaagatcaaaatca
tctgctgcaagtagtggtgcatctaagaaggattctcaggaggaaagcacaaacactgcc
aagggaaaggggaaggctgttgcaaaaccaaactcagaagaaccaaaaggacctaataca
cggaatgctactcgcagaaaagctgcttcagagaaagatctggaaatgaagcgagcacat
ggtgacagcagctctgaggatgaggagcttgacacatctcctattgaaattgatgacgct
ttaatgattgatgatgatgacatgtcagaggatgaagaagatgatcatgaggttctccaa
gatggctctcttcctatttgtgttcaagatggggtgcatgacgtgaaattgggtgacact
gatgactctaacattggttcagcaagtgatagccaagtgcagccctcatctggttccagc
actaggaacatcatgagcaggggagtagatccaaatacctttggttcacgaggtgcaatg
tcatttgttgctgcgacaatggctgggctggcttctgttggtggtcggggggttagaggt
agtcgcgatcgacgtggcctgtcacttggaggtagcataaatgagcacaataaactgata
tttatggctggggggaagcagctcagcaaacatctgactgtgtatcaagctctccaacgt
cagctgatgtttgaagaggatgatgatgagaagtttaatggatctgatttgtcaaatgat
ggaaatcgattttggggtgatgtgttcacgataacataccagaaggctgatagccaggct
gagaaggtatcccaaggtggttccacctcgttgaactcaaaatcagatccttcaagatct
atatctgaattgaaaggtgtttctctccttgatagcatcttacaggcagaactcccatgt
gatctagagagaacaaactcaacttacaacattttagcactattgcgtgtattagagggg
ctcaatcagttgtcccctcgtttaagagtacatgctgcttctgatgattttgctgaggga
aaaatcaccacactggatgagctatatagaactggagccaaggtaccgtcagaagagttt
gttaatagtaagttgacaccaaagcttgctcggcaaatgcaggatgttcttgccctctgt
agtggcagtttaccttcttggtgttaccagatgaccaaagcctgccctttcttgtttccc
tttgaaacaaggagacagtacttttactccacagcatttgggttgtcccgtgctttgaat
cgacttcagcaacaacagggtgacaaccaaaatgctggtggcgaaagggagatccgattt
ggaaggctacaacgtcaaaaagttcgtgtttcccgtaaccgtattctggattctgctgct
aaagttatggagatgttctccagtcagagagctgttcttgaggtagaatactttggtgaa
gttggaacagggcttgggcccactttggagttctatactctcttaagccatgaactccag
agtgttcgccttggattatggagatctagttctccatctgatacgggaatgcaaattgat
aggagcgcaagtcccgacgatgacttggcagccaaagaactcagctcagatttacctgac
aatggcagccacttgatacaagctccctttggattgtttcctcggccttggccacttacc
gttgatgcttcagaaggcagtagattttctaaggtcatcgaacatttccgcttggttggg
cgagtgatggcaaaagttttgcaagatggaagacttttagatttgcctctatcaacagca
ctttataagcttatacttggacaagagctggacttatttgacataatctcatttgatgct
gaattcggaaagacattgcaagaactgcaaattcttgttgaacggaagaggttccttgaa
tccacttatggcatgaatcagctagaagtcacggacttgcgtttccgtggcactcctatc
gaagatttgtgtttagattttactcttccaggttatcctgattatattcttaaagaaggc
gaggaaaacacaattgtaaatatttacaacttggaagagtatgttactttggtagtggat
gctacagttaaatcagggataatgaggcaagtcgaagcatttagatcaggatttaaccag
gtctttgacatctcatccctgaaaatattttcacctgaagagcttgactatctaatatgt
ggtcgccgagaaatttgggagcctgattcattggtggataatataaaatttgatcatggg
tatactgctaaaagtcctgcaattgtaaatctactcgagatcatggctgaattcacccca
gagcaacaacatgcattctgccagtttgtaactggtgctcctcggcttccgcctggtggt
ttagctgcccttaatcccaagcttactatagttaggaagcacccctcaagtgcggtgaat
acttcaaatatcgctggagttacagagtctgcagatgatgatctgccaagtgttatgaca
tgtgctaattatcttaaattgcctccatactccacaaaagaagtgatgcgcaagaaattg
ctttatgcgatcctagaaggccgtggatcatttgatctatcatga
Oryza sativa japonica (Japanese rice) (RefSeq): 4337658
Help
Entry
4337658 CDS
T01015
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4337658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4337658
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
4337658
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
HECT type E3
4337658
BRITE hierarchy
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Motif
Other DBs
NCBI-GeneID:
4337658
NCBI-ProteinID:
XP_015638473
LinkDB
All DBs
Position
5:1222858..1230336
Genome browser
AA seq
1203 aa
AA seq
DB search
MECPKECLSHGVPAAVLQFFDFFSMHKQKLVLKIVANVLGDFSAKDAAKAMEAAPVLCNL
LQSTDKTILDSAVSCLVLVSDGACDSAQHMEKLYELNAVQATMRLMENDGWKSLSDETLS
GILGLLKDLASLSARAVKSLFELNICDLLKQMITYYTSSHSDHNKVQTLVELIYYLMPPL
EMCDHRTELIIAKKNVITEQSGYIQQLASILTFIIQVAKSAALSSICYSCVVVIRNIVEL
STPSSLVEVQKTVNLSSLLAGWLARKNRHIIFQTLNVSKTLLRKDQKFFFETFIREGLKH
AIDAILTQEKGKSRLPESCLCFDLDLETSTDDACRINNGAILKLAEEIKKNFLVKVAKSP
HKFGCAFKSIKEFFSRLNCHATAPPAKDQDLCKQLSDFSRQLLSDELPSTSTFEFVQSGS
IKHLAGYLSNGTYFNSNLRNCQDLIGELKEVKIRLQKFTHLALSVDNESSVKPLEILVEK
LIDALHVWYDSFPVILADEQCTRESTMIPLRDSGTEEPMSLYIKFSRSAREEELEDYGGV
LPVDLSSTPESIEEVLLPEICKRTGNETSYKENTQEANGSRKSVGLRNGDGHKFSRLKFS
YKGTQLQSSTPLFESILRSMHEGETDLQIDPSFWDKEHKIVYRRRNKSKKISSHSSYNIQ
LCRVHEKLEMSLLKDPFFSTILTGKLPGDLDESDPSYNFLFMLKVLEGLNRFSYHLSMDD
KLCKFAEGCLQEFDDLKVAICPIPRDQFVSSLLTNKLEQQMQDSLFGDGLIPSWCIYLVE
TCPFLLSFEARWKYFCLTAHHSFMTDEASSSTETKKYSVTRSKILEDASSMLNKHGSDTK
FIEVEFDGEVGTGRGPTFEFYTTVSHELQRVGLGMWRGDDTSQECEAGFVHAPFGLFPQP
WSSANTSSQGISLSNVVQKFKLLGHLVARAVLDGRVLDIPLSKAFYKIMLEQDLDIYDIP
SFDPKLGKTVMEFQALVKRKKFLEERASNPAADLSYKNVRLEDLCLDFTLPGNPEYELVP
GGSEKMVTLDNLEEYVSSIVDATLKSGISNQIEAFKAGINKVFALKTLRLFSEDEMERIL
CGEQDSWASNKLEDHINFDYGYDANSASVISFLEILREFGREDQRAFLHFTTGAPQLPLG
GLASLDPKLTVVRKQCDGKVDNELPSVNTCRHFFKLPPYSSKEIMRQKLKYAIKEGLGSF
QLS
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggagtgccccaaggagtgcctcagccacggcgtgccagccgccgtgctgcagttcttc
gacttcttctcgatgcacaagcagaagctggtgctcaagatcgtcgccaacgtcttgggc
gacttcagcgcgaaggatgcggccaaggccatggaggccgcgcccgttctgtgcaacctc
ctgcaatccactgacaagacgatactcgactccgccgtttcttgcttggttttggtctct
gatggtgcttgcgacagtgcccaacacatggaaaagctttacgagcttaatgcagtccaa
gcgacgatgaggttgatggagaacgacgggtggaagagcctcagcgatgagactttatct
ggcatccttggtcttctcaaagacctagcttctctctcagcaagggctgtaaagtctctt
tttgagttaaacatttgtgatttgctcaagcagatgataacatactacacctcgtcgcac
agtgatcacaataaggtgcagacgcttgtagagctcatttattatcttatgccacctctt
gaaatgtgtgaccatcgtaccgaactaatcattgcaaagaagaatgtcatcacagaacaa
agtggatacatccaacagcttgctagcatccttacttttataatacaggttgcgaaatct
gctgcactatcatcaatttgctacagttgtgttgttgtcatcagaaacattgttgaatta
agcacaccttcttccttggtggaggtacagaagacagtaaacctgtcaagcttacttgct
ggctggttggcccggaagaaccgccatatcatattccaaacgctcaacgtttcgaagacc
cttctgagaaaagaccagaaattcttctttgagaccttcatcagggagggtctaaagcat
gcaattgatgcaatactaacacaggaaaaaggaaagagccgcttgccagaaagttgcctt
tgttttgatttagacttggagacctcgacagatgatgcatgcaggattaataatggtgct
atcctgaaactagcggaggagataaagaaaaacttcttggtaaaggttgccaagtctcct
cacaagtttgggtgtgcttttaaaagcataaaggaatttttttctcgtttgaattgtcat
gccacggcacccccagctaaagatcaggatctctgcaagcagttgtctgatttttcaagg
caattattatcggatgaactgccaagtacttctacttttgagtttgtgcagagtggatct
atcaaacatttggcaggttatctttccaatgggacatactttaattcaaatctcaggaat
tgccaggacttgataggggagcttaaggaggtgaaaatccggctgcagaagttcacgcac
ttggctctcagcgtggacaatgaaagctcggtgaagccacttgagattttggtggagaaa
ctgatagatgcgttgcatgtgtggtatgacagtttccctgtaatcctggctgatgaacag
tgcacacgtgagagcaccatgattcctctgagggattcaggaactgaggaaccaatgtca
ctatatataaaattttcgagatcagccagggaggaggagttggaggattatggtggagtt
ctccctgttgatctttcttcgacacctgaatccattgaagaggtcctgttgcctgagatc
tgtaaaagaactggcaatgaaacttcatacaaggaaaacactcaagaagcaaatgggagc
agaaaatctgttgggctcagaaatggtgacgggcacaagttctcaagattgaaattctct
tacaaaggaacacaactccagtcatctacaccactttttgagtcaatcctccgctcaatg
catgaaggagaaaccgatctccagattgacccatctttttgggataaagaacacaagata
gtatacagaagaagaaacaaaagcaagaaaatatcttcccatagttcctacaatattcag
ttgtgccgtgtgcatgaaaaacttgaaatgtcattgcttaaggacccctttttctccacc
atactcactggcaagcttcctggtgatctggatgaatctgatccatcatataacttcctg
ttcatgctgaaagtcctcgaagggctcaaccgtttttcatatcatctatcaatggatgat
aagttatgcaaatttgctgaaggctgcctccaagagtttgatgaccttaaggtggcaatt
tgtccaattccacgggatcagttcgtgagcagtctactgacaaataagttagagcagcaa
atgcaagatagcttgtttggggatggcttgataccctcgtggtgtatctatttggttgaa
acttgcccgttcttgttgtcattcgaagctcgatggaagtatttctgcctgacggcacat
cactcattcatgacagatgaggctagcagttcaacagaaactaagaagtacagcgtaaca
cggagcaaaatccttgaagatgcttcatcgatgttgaacaaacatggatcagacaccaaa
ttcattgaggtggaatttgatggagaggttgggaccggtcgaggcccaaccttcgaattc
tataccacagttagtcatgaactacagagagtgggtcttggaatgtggagaggagacgac
accagccaagaatgcgaagctggttttgtccatgccccttttggtctctttccacagcca
tggtcctcagcaaacacttcatctcaagggatcagtttgtccaatgtggtacaaaaattc
aagcttcttgggcatcttgtagcaagagcagttttggatggaagggttctggatattcct
ctctcgaaagcattttacaagatcatgcttgagcaggaccttgatatttatgacattcca
tcatttgatcccaagttgggcaagactgttatggagtttcaagcacttgttaaaaggaag
aagttcctggaggaaagggcatccaatccagcagctgatttgtcctataaaaacgtgcga
ttggaggatttatgtcttgactttacccttcctggaaatccggaatatgaacttgtccct
ggaggttcagagaagatggtgacacttgacaatttggaggagtatgtgtcttcaattgtt
gatgcaaccttgaaaagtgggatatccaatcaaatagaagctttcaaggctggaattaac
aaggtttttgctcttaagactcttcggttgttcagtgaggatgagatggagcgtatacta
tgtggcgaacaagattcttgggcttcgaacaaacttgaggatcacatcaattttgattat
ggatatgatgcgaacagtgcatcagtaattagtttcctggagatcttgcgggagtttgga
agagaggaccagcgggcgttcttgcattttacgactggagctcctcagctcccacttggt
ggcctagcttcgctcgatcctaagctcaccgtagtgcgaaagcaatgtgatggcaaagta
gacaacgaattaccgagtgtcaatacttgccggcatttcttcaagcttccaccgtactcc
tctaaggagattatgagacagaagctcaaatatgctatcaaggagggtttaggctccttc
caattatcatga
Oryza sativa japonica (Japanese rice) (RefSeq): 4339037
Help
Entry
4339037 CDS
T01015
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4339037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4339037
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
4339037
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
HECT type E3
4339037
BRITE hierarchy
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
HEAT_EZ
Adaptin_N
HEAT
Motif
Other DBs
NCBI-GeneID:
4339037
NCBI-ProteinID:
XP_015639719
LinkDB
All DBs
Position
5:complement(22776056..22785636)
Genome browser
AA seq
1534 aa
AA seq
DB search
MDRCRKRPDSDPGAPGEADEEHPADKRPCTAEPSTSAAVAPEGEAAAAERACSDMDTSSS
GHAGDGEADGDGDGEGEGDGDDDGDGDGGSSCESDGGGSPRRCGGGGRFQRMVAAVAADG
AEEGAVVAALTELCEALSFCGEDVGGYFPTDAAARALVRLVGGGADGAPAAAASPDVMLL
SVRAITYLCDAMPRAADAVVRHGLLPLLCSRLLAIEYLDVAEQCLQAFEKISQRQPTPCL
QAGMITAVLTYIDFFSASIQRVAVSAAANACKKVPKDCSQFVMDSVPVLCNLLQSEDKMV
VEKVASCLINIVDSFSSSVELLDMFCHQGVIEKVLPLINTGGLTSLSPSTCSNLIGLLAK
LACNSLVAVKSLFELNVGNTISRILVTSDLSHGMPYLPLENQSNQVNEALKLANQLIPSA
ARDVEDTQMVLAKEKIIVDEPRFLCQFSMEILPVLIKAVNSGANSYICYGCASIVKNICY
FSKPEMLQELLKDANIPSFLAGLLSRKDHHVLFSSLKLIEILMQKLPDAYLGSFIKEGVV
YAVEALLMQEDCSKSTNLSDEAQQSENQPIIRNKPTCFCYAFDYPRSDAAETRTCMIGKG
NLFTFARHVKTTYFTTEAVNSEMGLTEILQKLKTCCAVLNDSADKSLNRDNIQNEEHLTD
ILSEVMMELHGGETMTTFEFLESGLIKSLSNYLSNGKYLQLERIPNDYNTEHFLAVLKRF
QSFTQISFSRMEQGWGDMLLTLLVRKLQNALTSLDNFPVIMSHNFKPRNNISDIPTRHST
ITPCIRVRFKKDEDQTNLSSYDNVVNLEISSLLHTIEEFLWPKICTGTSNQKPESSANGT
ASENKYPEDDLQERYSSPESSPPPEGVIIGNQSPSVEPGSNKGPSSSGAGQQETNTSDHA
AQPKLLFSLKGKELDQSVTLYQSILQDQINAGSDIILDNQFWRIVHDVTYRTATNPEIDD
PLKYSSCATTPAHPDKAGYICQTLPFFTSLLLGKLPCKLDRSSPSYDILFMLKVLEGLNR
YSFHLVSDERNRAFVHGSITDLDDLKVDVSVVPQQEFVSAKLTDKLEQQMHDPLVLRSRC
LPLWCTELMSACPFLFSFEARWKYFQLTAFGSLTPQHGNMMDTSGSGVMTERVPSFSRKK
FKVDRDNILVSAAKVMQSHARSNAMLEVEYEEEVGTGLGPTMEFYTLISHEFQKSGLGMW
RGELSGEAGLDNVHGGSVFVVAPNGLFPKPWSTHVDCSSFSEVNKQFHLLGQVVAKAVKD
NRILDIPFSKAFYRLILGQELNIYDIHSFDPELAMTLMEFKALAARRKYLESSSSGDCKS
TSDLSYRGCRIEDLAIEFALPGYPEYVLSLENSLDNVSADNLEQYVSFVVDATIRSGIAR
QLEAFKSGFNEVFPLSMLQVFSEDELERLLCGEQDTWDFAKLVDHIKFDHGYTSSSPPVI
NLLEVIQEFEGHQRRAFLQFITGSPRLPPGGLAALNPKLTVVRKQHNSNEADDDLPSVMT
CANYLKLPPYSSKDKMREKLLYAITEGQGSFHLS
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atggatcgctgccggaagcggcccgactccgaccctggcgctcccggcgaggcggacgag
gagcaccccgccgataagcgcccctgcactgccgagccgtcgacctcggcggcggtggcg
ccggagggggaggcggcggcggcggagcgcgcctgctcggatatggacacatcatcgtct
ggacacgcaggggatggggaagcggatggggatggggatggggaaggggaaggggatggt
gacgatgatggggatggggacggggggtcgtcgtgcgagtcggatgggggagggagcccg
aggaggtgcggcgggggagggaggttccagcggatggtggcggcggtggcggcggacggc
gcggaggagggggcggtggtggcggcgctgacggagctctgcgaggcgctctccttctgc
ggggaggacgtcgggggatacttcccgacggacgccgcggcgcgggcgctggtgcggctg
gtcgggggcggcgccgatggcgcgccggcggcggcggcgagccccgacgtgatgctgctc
tccgtgcgcgccatcacgtacctctgcgacgcgatgccgcgcgccgccgacgccgtcgtc
cgccacggcctgctccccctgctctgctcccgtctcctcgccatcgagtaccttgatgtc
gctgagcagtgcttgcaagcattcgagaagatatcgcagaggcagccgacgccgtgcttg
caggctggcatgatcactgctgtgctcacgtacattgacttcttctctgcaagtatccag
agggttgcggtctcagctgctgcgaatgcctgtaagaaggtccccaaagattgctcccaa
tttgtgatggattctgtgccagtgttgtgtaatctactgcagtctgaggacaagatggta
gtggagaaggttgcaagttgcttgataaacatcgtggattcatttagtagttcagtggag
cttctcgacatgttctgtcaccagggtgtgatagagaaagtcctgcctctgatcaatact
ggcgggctaacttctcttagcccatcaacatgcagtaacttgattgggcttctcgccaag
ctagcctgcaattcacttgtggctgtgaagtctctctttgagctgaatgttggtaacacc
ataagcagaattctggttacttcagatctctcacatggcatgccttacctgcctttggaa
aaccaaagcaaccaggtcaatgaagctttgaaattagcaaaccaacttattccttctgca
gcaagagatgttgaagatacccagatggtacttgcaaaagaaaaaataattgtagatgaa
ccaaggtttttgtgtcagttctctatggagattcttcctgtcttgatcaaggcagtcaac
tctggtgcaaattcatacatttgctatggatgtgcttcaattgtaaaaaacatctgttat
ttcagtaaacctgaaatgcttcaagagttgctcaaggatgcgaacataccaagtttcttg
gctggtttattgtctcggaaggatcatcatgtgctattctcatcactaaagcttatcgaa
attctcatgcaaaagcttcctgatgcttaccttggatcctttatcaaggaaggtgttgtc
tatgcagttgaggctcttcttatgcaagaagattgttcaaagtctactaatctctcagat
gaagcacaacaatcagagaatcagcctatcataagaaataagcctacatgtttctgctat
gcatttgattatcccagatctgatgctgctgaaacaaggacttgcatgattggaaagggc
aacctttttactttcgcaaggcatgtgaagacaacctatttcactaccgaagcagtgaac
tctgagatgggtttgacagagattttgcaaaagctcaaaacttgctgcgcagttctgaac
gattctgctgataagtcattaaaccgagacaatatacaaaatgaagagcacttgactgac
attttaagtgaggtgatgatggagcttcatgggggagaaacaatgactacctttgaattt
cttgagagtggattgatcaaatccttgtctaactatctctccaatggcaagtacctccaa
ttggagagaatcccaaatgattacaatactgaacattttcttgccgtgctaaaaaggttt
cagtcatttactcagatatctttttcaagaatggagcagggctggggtgatatgctcttg
acactgttagtaaggaaactgcagaatgctcttacttctcttgacaacttcccagtgata
atgagccataatttcaagccgaggaacaatatttcagatatccctactaggcactcaacg
attactccatgtatccgagttcgatttaagaaggatgaagatcaaaccaacttgtcgagc
tatgataatgttgttaatttggagatctcttccttgttgcacactattgaagagttcttg
tggcccaaaatttgtacaggcacaagcaatcagaagcctgaatcatcggccaatggtact
gcttctgaaaacaaatatcctgaagatgacctccaggaaagatattcctcacccgaatca
tcccctccaccagagggtgttataataggaaatcaaagtccatctgtagaaccaggctca
aataaagggccttcgtcatctggtgcaggccaacaagagacaaacacaagtgatcatgct
gcgcaaccaaaattgttatttagcttgaaaggaaaagagcttgaccaatctgttactctg
tatcaatcaatcctgcaggatcagattaatgcaggttctgacataatattggacaaccag
ttttggcgcattgtgcatgatgtaacatatagaacggctacaaacccagaaattgatgat
cctcttaagtattcatcttgtgcaacaacaccagcacatcccgataaagctggatatatt
tgtcagacgctccctttcttcactagcctgttgcttggcaaacttccttgcaaacttgac
agatcaagtccatcatatgacatattgtttatgctaaaagttctagaggggttgaaccga
tactcttttcacctcgtctctgatgagagaaaccgtgcttttgtacatggaagcataact
gaccttgatgatctgaaagttgatgtttctgtagttccacagcaggagtttgtcagtgct
aaattgacagataaactggagcaacagatgcatgatcccttggttttaaggtctcgttgc
ctgcctttatggtgcactgaactgatgtctgcatgtcccttcttgttttcttttgaggca
agatggaagtatttccagctgacagcatttggttctttgaccccacaacatgggaatatg
atggatacaagtggcagtggtgtaatgacagaaagggtgccttccttctcacggaaaaag
ttcaaagttgatcgcgacaatatacttgtttctgctgctaaagtgatgcaatcacatgct
cggagtaatgcaatgcttgaagtagaatatgaagaggaagtaggcacaggcttgggtcct
acgatggaattctatacattgataagtcatgagtttcagaagtctggtttaggcatgtgg
agaggggagctctccggcgaagctggcctggataatgttcatggtggttctgtatttgtg
gttgcccctaatggactttttcctaaaccatggtccacccatgtggattgttcttccttc
tcagaagtgaataaacagttccacctccttggtcaggtcgttgcaaaggcagttaaagac
aacagaattctcgacattccattttctaaagcattttacaggcttatactaggacaggaa
cttaatatatatgacattcactcatttgatcctgaactagcaatgacccttatggagttt
aaagcacttgctgctcggagaaaatatttagaatcaagttcaagtggggactgcaagagt
acatctgatttgtcttatcgaggttgcaggattgaggatcttgctattgagttcgctctt
ccaggatatccagaatatgttctttctttagaaaatagcttggataatgtaagtgctgac
aatttagaacagtatgtttcttttgttgttgatgcaacaattagaagtggaattgcaaga
cagctggaagcttttaagtcaggattcaatgaggtatttccattaagcatgctccaggtc
ttctcagaggatgagctggagcgattactctgcggtgaacaagatacgtgggattttgcg
aaacttgtggatcatataaagtttgatcatggctacacttccagcagccctcctgtcatt
aatttgttggaggttatacaggagtttgaaggccatcaacgcagagctttcttgcaattt
ataacaggttcacctcgactcccaccgggtgggttagctgcgctaaatccgaagttgacg
gttgtccgaaagcagcataacagcaacgaggctgatgatgaccttccgagtgtgatgact
tgtgctaattatctaaagttacccccctattcttccaaggacaagatgagggagaaacta
ctctacgcgattacggaaggtcaggggtccttccacttatcttga
DBGET
integrated database retrieval system