Oryza sativa japonica (Japanese rice) (RefSeq): 4328147
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Entry
4328147 CDS
T01015
Name
(RefSeq) 3-isopropylmalate dehydratase large subunit
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00290
Valine, leucine and isoleucine biosynthesis
osa00660
C5-Branched dibasic acid metabolism
osa00966
Glucosinolate biosynthesis
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
osa01210
2-Oxocarboxylic acid metabolism
osa01230
Biosynthesis of amino acids
Module
osa_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
4328147
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
4328147
09110 Biosynthesis of other secondary metabolites
00966 Glucosinolate biosynthesis
4328147
Enzymes [BR:
osa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
4328147
4.2.1.35 (R)-2-methylmalate dehydratase
4328147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
Motif
Other DBs
NCBI-GeneID:
4328147
NCBI-ProteinID:
XP_015625698
UniProt:
Q6Z702
B9F279
LinkDB
All DBs
Position
2:complement(1304864..1309849)
Genome browser
AA seq
514 aa
AA seq
DB search
MASISAASPVAGKAAAFAHKNELAAAAVAPSQQQLQRRVSGRRARSGRVRAVATPARAPR
APSSTGSVKSAMTMTEKILARASERASLEPGENVWVDVDVLMTHDVCGPGTIGIFKREFG
EDAKVWDREKVVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLSNFKANPDY
KGVCHVALAQEGHCRPGEVLLGTDSHTCNAGAFGQFATGIGNTDAGFVMGTGKALLKVPP
TIRFVLDGEMPPYLLAKDLILQIIGEISVSGATYKSMEFVGSTVESLNMEERMTLCNMVI
EAGGKNGVVPADQTTFNYLEGKTSVEYEPVYSDAQARFVSDYRFDVSKLEPVIAKPHSPD
NRALARECKDVKIDRVYIGSCTGGKTEDFFAAAKVFLASGKKVKVPTFLVPATQKVWMDI
YSIPVPGAGGKTCSQIFEEAGCDTPASPSCGACLGGPRDTYARMNEPMVCVSTTNRNFPG
RMGHKEGQIYLASPFTAAASALTGYVTDPRDFLM
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatctccgccgcctcccccgtcgctgggaaggccgccgccttcgcccacaag
aacgagctcgccgccgccgccgtggcgccgtcgcagcagcagctgcagcggagggtgagt
gggaggagggcgcgttcggggagggtccgcgccgtcgccacgcccgcccgcgccccccgc
gccccgtcctccactggctcggtgaagagcgccatgacgatgacagagaagatcctggcg
agggcgtcggagcgcgccagcttggagcccggggagaacgtgtgggtggacgtcgacgtg
ctgatgacgcacgacgtctgcggccctggcaccatcgggatcttcaagcgggagttcggg
gaggacgccaaggtttgggaccgagagaaggtggtcatcatcccggaccactacatcttc
accagcgatgagcgagcaaaccgaaatgttgatatcctcagggatttctgtatggagcag
aacatcaagtacttctatgacatcaaggacctgagcaatttcaaagcaaatccagactac
aagggtgtttgccacgttgctcttgctcaagagggtcattgcagaccaggcgaggttctc
cttggtactgattctcatacatgcaatgctggagcctttggccaatttgcaactggaatt
ggaaacactgatgctggttttgtgatgggcactgggaaggctcttcttaaggtgcctcca
actatcaggtttgtattagatggagaaatgccaccttatttacttgcaaaggatctgatt
ttacaaattattggtgagatttctgtatctggcgcaacatacaaatccatggagtttgtt
ggatcaactgtggaaagtctaaatatggaagagcgaatgacactgtgcaacatggttatt
gaagctggtggcaagaatggtgttgtgcctgccgatcaaactacatttaactatcttgag
ggcaagacatcagttgaatacgagcctgtctatagtgatgctcaggccagatttgttagt
gactaccggtttgatgtatccaaattggagccagttattgccaagccacattcacctgac
aaccgtgctctagcaagagagtgcaaagatgtcaagattgaccgggtctatatcggttct
tgtactggaggtaaaactgaggacttctttgctgctgcgaaggtgttcttagcttcgggg
aagaaggttaaagttcccacttttctcgttccggcgacacaaaaggtgtggatggacatt
tatagcatccctgtaccaggagccggtggcaaaacttgctcacagatatttgaggaggct
ggttgtgatacaccagctagccctagttgtggtgcttgtttgggtggtcctcgtgataca
tatgctcgcatgaatgaacctatggtgtgtgtgtcgacgacgaacaggaatttccccggc
aggatggggcacaaggaagggcagatctacctggcttcgccgttcaccgcggcggcttca
gccctcaccggatacgtcactgaccccagggacttcctgatgtaa
Oryza sativa japonica (Japanese rice) (RefSeq): 4330192
Help
Entry
4330192 CDS
T01015
Name
(RefSeq) 3-isopropylmalate dehydratase small subunit 3
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00290
Valine, leucine and isoleucine biosynthesis
osa00660
C5-Branched dibasic acid metabolism
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
osa01210
2-Oxocarboxylic acid metabolism
osa01230
Biosynthesis of amino acids
Module
osa_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
4330192
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
4330192
Enzymes [BR:
osa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
4330192
4.2.1.35 (R)-2-methylmalate dehydratase
4330192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase_C
Hydrolase_like
Motif
Other DBs
NCBI-GeneID:
4330192
NCBI-ProteinID:
XP_015627253
UniProt:
A3A9R2
Q6H6I1
LinkDB
All DBs
Position
2:complement(26465708..26469287)
Genome browser
AA seq
257 aa
AA seq
DB search
MAAAAAAPALSLAEAAPVTAVLAPCPTPSRTFRRRSWVAAICRPALKCHHSRPLTAVVAA
AAAAAAAGDSTSAGVFHGECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRKLGSFAFVGLP
TAAYPTPFVAPGEETTRYAVIIGGANFGCGSSREHAPVALGAAGARAVVAEGYARIFFRN
SVATGEVYPLELADTGAWKECKTGDVVTVELDNCVMINHTSGKQYKLKPIGDAGPVIEAG
GIFAYARKTGMIASKSA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcggctccggctctatccttggccgaggcggcgccggtgacagca
gttctggcaccgtgtcccacgccctcgaggacgttccgccgccgcagctgggtcgcggct
atctgccggcccgccctgaaatgccaccacagtcgtcccctgaccgccgtggtcgccgcg
gctgcggctgccgctgcggcgggggactcgacgtcggccggcgtattccacggcgagtgc
ttcgtcgtgggggataacatcgacaccgaccagatcatcccggccgagcacctgaccctg
gtcccgtccaagcccgacgagtaccgcaagctcggctcgttcgccttcgtcggcctcccc
accgcggcctacccgacgccgttcgtcgcccccggcgaggagaccacccgctacgccgtc
atcatcggcggcgccaacttcggctgcggctcctcccgcgagcacgcgcccgtcgccctg
ggcgccgccggcgcccgcgccgtcgtggccgagggctacgcgcgcatcttcttccgcaac
tccgtggccaccggtgaggtctacccgttggagctagcggacactggagcctggaaggag
tgcaagaccggggatgtggtcacggtggaacttgataattgcgtcatgatcaaccacaca
tccggcaagcagtacaagctgaagcctatcggcgatgccgggccggttattgaggcaggc
gggatctttgcctatgcccggaagaccggaatgatcgcatccaagtctgcgtga
DBGET
integrated database retrieval system