KEGG   Oryza sativa japonica (Japanese rice): 4328287
Entry
4328287           CDS       T01015                                 
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 2 homolog A
  KO
K03028  26S proteasome regulatory subunit N1
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03050  Proteasome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    4328287
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:osa03051]
    4328287
Proteasome [BR:osa03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     4328287
SSDB
Motif
Pfam: RPN1_RPN2_N RPN1_C PC_rep HEAT_2 SPT6_acidic
Other DBs
NCBI-GeneID: 4328287
NCBI-ProteinID: XP_015626471
UniProt: A0A0P0VET4 Q6Z2Z3
LinkDB
Position
2:join(2571585..2571710,2571843..2571943,2572187..2572310,2572404..2572463,2572574..2572641,2573332..2573374,2573838..2573903,2574049..2574087,2574187..2574269,2574466..2574577,2574652..2574735,2574838..2574996,2575080..2575184,2575263..2575367,2575473..2575613,2575732..2575836,2575923..2576147,2576574..2576687,2576775..2576990,2577486..2577545,2577639..2577752,2577859..2577944,2578023..2578131,2578220..2578398,2578485..2578557)
AA seq 898 aa
MAPPENPNGAGPAAPSDPAQPQPQPPAKSKWKKKDEKKDDDLSEEDLALKEQLELYVVRA
QDADPGVQKLALESMRQEIRSATSSMTSVPKPLKFLRPHYGTLKSYFETMPESSDLKRYM
ADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEFQKRQDDDMPI
DALMELVQQIVSFHMKHNAEPEAVDLLMEVEDLDLLVEHVDSTNYKRTCLYLTSSSKYLP
APDDMLALDIAYTIYMKFEDLTSALRIALLLDNKSMQYVKQVYTATEDLQLKKQFSFIIA
RHGLAMEIDDEIAADGNDKEGLQEIVNNSKLSEGYLTLARDIEVMEAKSPEDIYKVHLID
GRGASSSLDSARQNLAATFVNAFVNAGFGQDKLMTAPSDSSSSGASGNWLFKNKEHGKAS
AAASLGMILLWDTDSGLAQLDKYLHSNDAHVVAGALLGIGIVTCGVKNDCDPALAILMEY
INKDDTNIRIGAILGLGIAYAGSQKEELKSYLSTVLGDSEKSTLEVLIFSAIALGLVFVG
SCNEEIAQSIIFALMERSEAELAEPIIRLLPVALGLLYLGKQESVEATAEVSKTFDEKIR
KYCDVTLMSLAYAGTGNVLKVQKLLGICSQHLEKGETHQGPAVLGIALIAMAEELGAEMA
VRSLERLLQYGEQNIRRAVPLALGILCISNPKVNVMDTLSRLSHDADADVSMAAIISLGF
IGAGTNNARIAGMLRNLSSYYYKEAAHLFCVRIAQGLVHLGKGLLTLSPYHSDRFLLSPM
ALGGLVTVLHACLDMKSTILGKYHYILYIIVLAMQPRMLLTVDEDLKPLSVPVRVGQAVD
VVGQAGRPKTITGFQTHSTPVLLAAGERAELATEKYIPLTSVLEGFVILKKNPEYNEE
NT seq 2697 nt   +upstreamnt  +downstreamnt
atggcgccgcccgagaaccccaacggcgcgggccccgcggcgccgtccgaccccgcgcag
ccgcagccgcagccgccggccaagtccaagtggaagaagaaggacgagaagaaggatgac
gatctgtcggaggaggatttggcgctcaaggagcagctcgagctctacgtggttcgggcg
caggacgcggatcccggcgtgcagaagctcgcgcttgagagtatgaggcaggagattcgt
tccgccacaagctcaatgacatctgtaccaaagccactgaaattcctccggccacactat
ggaacactcaagtcttactttgaaaccatgccagaatcttctgatttgaagaggtacatg
gccgacattttatcagtgttagctttgacaatgtccgctgaaggagaaagagaaagcctt
aagtaccgtttgttgggctctgaaggtgatatcggttcatggggtcatgaatacgtaaga
aatttggcaggcgaaattgcacaagaattccaaaagcgtcaggatgatgacatgccgatt
gacgctcttatggaactagtgcagcaaattgtttcattccatatgaagcataatgctgaa
cctgaagcagttgatcttctgatggaggtggaagatcttgatttgctagttgagcatgtt
gactctacgaactacaaaagaacttgcttgtaccttacaagttcatcgaaatacctccct
gctcctgatgacatgttggcgcttgacattgcttataccatttacatgaagtttgaagac
cttacaagtgctttgcggattgctctgctccttgacaacaagtcaatgcagtatgtgaag
caggtctacaccgcaactgaggatcttcagctcaaaaagcagttctcattcatcattgca
cgccatggtttggccatggagattgacgacgagatagctgccgatggcaatgataaggag
ggtttgcaagaaatcgttaataatagtaagctgagtgaggggtacctcacccttgctcga
gatatcgaagtgatggaagcaaaatctccagaggatatatataaggtccatttaattgat
gggcgtggtgccagctccagtcttgattctgcaagacaaaatttagctgcaacatttgta
aatgcattcgtaaatgctggatttggtcaggataagttgatgactgctccatctgattct
tccagtagcggagcttctggaaactggttattcaagaacaaggaacatgggaaagccagc
gcagcagctagcctgggaatgattctcttgtgggatactgattctggacttgctcagctt
gacaagtacttacatagtaatgatgctcatgttgttgctggagctttgctaggtattggt
attgtcacatgtggtgtgaagaatgattgtgatccagcacttgctattctcatggagtac
attaacaaggatgacacaaacattcggattggggcaatcttgggtcttggtattgcatat
gcgggttctcagaaagaggagcttaaatcttatctatcaactgtgttgggggactctgag
aaatcaactcttgaggtcctgatattctccgccatcgctctgggattggtgtttgttggt
tcttgcaatgaagagattgctcaatctatcatatttgccttgatggagcgcagtgaggct
gagctggcagaacccattatacgcctgcttcctgttgcgcttggtcttctgtatcttgga
aagcaggagagtgtagaggctacggcagaagtttctaaaacatttgatgagaagataaga
aagtactgtgatgtaacacttatgtcactagcatatgctggaacaggaaatgtgctcaag
gttcaaaagctccttgggatttgctcacagcatcttgagaaaggtgaaacccaccagggg
ccagctgtcctaggaattgcgcttattgcaatggctgaagaattaggagctgagatggct
gtacggtcacttgagcgtcttttacagtatggcgagcagaatattagacgggcagttcct
cttgctcttggcatactctgcatatctaatccgaaggtaaatgttatggacacgcttagc
agactgagtcatgatgcggatgctgatgtgtcaatggctgcaatcatttcattgggtttc
attggtgctggtacaaacaatgctagaatagctggtatgcttcgcaatctttcaagttac
tattacaaagaagctgcgcatctgttttgtgtaagaattgctcaaggacttgttcacctt
gggaagggtttgttgactctctctccataccattctgaccggtttctactttccccaatg
gcccttggaggccttgttactgtattgcatgcttgcctcgatatgaaatccaccattcta
gggaaataccactacattctttacattatcgtcttggcgatgcagcctagaatgctttta
acggtggatgaggatctaaagcccctatctgttccagtacgggttgggcaagctgttgat
gtggttggtcaggctggaaggcccaagacaattactggtttccaaacacattcgacaccc
gtattgcttgcagcaggggaacgggctgaattagcaaccgaaaaatacattccgctgact
tcggtattggagggctttgtaattctgaagaagaacccggaatataacgaggagtga

KEGG   Oryza sativa japonica (Japanese rice): 4341960
Entry
4341960           CDS       T01015                                 
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 2 homolog A isoform X1
  KO
K03028  26S proteasome regulatory subunit N1
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03050  Proteasome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    4341960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:osa03051]
    4341960
Proteasome [BR:osa03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     4341960
SSDB
Motif
Pfam: RPN1_RPN2_N RPN1_C PC_rep HEAT_2
Other DBs
NCBI-GeneID: 4341960
NCBI-ProteinID: XP_015643124
UniProt: A0A8J8YL10 B9FQQ6
LinkDB
Position
6:complement(join(30290304..30290376,30290462..30290640,30290724..30290832,30290923..30291008,30291115..30291228,30291309..30291368,30291666..30291881,30291979..30292092,30293210..30293431,30293524..30293628,30293714..30293854,30293946..30294050,30294116..30294223,30294331..30294489,30294638..30294718,30294797..30294908,30295011..30295093,30295209..30295247,30295639..30295704,30296179..30296221,30296547..30296614,30296842..30296901,30296987..30297107,30297745..30297845,30297932..30298072))
AA seq 901 aa
MPPREDPNGDASSASPSDPVPPPPQQPQPQPAKGKGKKKDEKKDDDLSEEDQALKEQLEL
YVVRAQDTDPGVQKLALESMRQEIRSATSSMTSVPKPLKFLRPHYGTLKAYFETMPESDL
KKYMADILSVLALTMSAEGERESLNYRMIGSEGDIGSWGHEYVRNLAGEIAQEFQKRQDD
GMPTDSLKELVEQIVSFHMKHNAEPEAVDLLMEVEKLDLLVKHVDSTNYKRTCLYLTSSS
KYLPAPDDMSALKIAFEIYMKFGDFANALRIALLLYDKSLELKPIFTATDDFQLKKQFAF
IIARHGLSIEIDDDIAADENEKEALQDIISNIKLSEGYLTLARDIEVMEPKSPEDIYKVH
LIDGRGATSSSLDSARQNLAATFVNAFVNAGFGQDKLMTTPSDSSSSGSSGNWLFKNKEH
GKASAAASLGMILLWDSDSGLAQLDKYLHSNDIHVVAGALLGIGIVSCGVKSDCDPAFAL
ISEYFSRDESIIRIGAILGLGIAYAGSQKEEVRENLTAFLTDSQVPLEVLVFSAISLGLV
FVGSCNEEVAQTIICVLMERSEPELAEPIMRLLPVALGLLYLGKQESVEATAEVSKTFDE
KIRNYCDVTLMSLAYAGTGNVLKVQKLLGICSEHLEKGETHQGPAVLGISLIAMAEELGA
EMAVRSLERLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTMSRLSHDADAEVSMAAIIS
LGLIGAGTNNARIAGMLRNLSSYYYKEAGHLFCVRIAQGLVHLGKGLLTLSPYHSDRFLL
SPIALAGLVTVLHACLDMKSIILGKYHYMLYILTLAMQPRMLLTVDEDLKPLSVPVRVGQ
AVDVVGQAGRPKTITGFQTHSTPVLLAAGERAELATEKYLPLTPVLEGFVILRKNPEYHE
D
NT seq 2706 nt   +upstreamnt  +downstreamnt
atgccgccgcgcgaggaccccaacggggacgcctcctccgcctccccctcggaccccgtc
ccgcctccgccgcagcagccgcagccgcagccggccaagggcaaggggaagaagaaggat
gagaagaaggacgacgacctgtcggaggaggaccaggcgctcaaggagcagctcgagctc
tacgtggtgcgggcgcaggacaccgatcccggcgtccagaagctcgccctcgagagcatg
aggcaggagatccgttctgcgacaagttcaatgacctctgtcccaaagcctctcaaattc
cttcgcccgcactatggaactctcaaggcttactttgagacaatgccagaatctgatctg
aagaagtatatggctgatattttgtcagtattggccctgacaatgtccgctgaaggagaa
agagagagcctcaactaccgaatgataggctctgaaggtgacattggttcatggggtcat
gaatatgtgagaaacttggctggtgaaattgcacaggaattccagaagcgccaggatgat
ggcatgccaactgattccctgaaggaactggtggagcaaatcgtttcattccacatgaag
cataatgctgaacctgaagctgtggatcttctaatggaggtcgaaaagcttgatttgcta
gttaagcacgttgactccacgaactacaaaaggacctgcttgtacctcactagttcttct
aaatatcttcctgctcctgatgacatgtcggcacttaaaatagcttttgagatttacatg
aaatttggagattttgcaaatgctttgcgtattgcacttctgctttatgacaagtccctg
gagttgaagccgatttttacagcaactgatgattttcaactgaagaagcaattcgcgttt
atcatagcacgccatggtttaagcatcgagattgatgatgacatagctgctgatgaaaat
gagaaggaggctttgcaggacataatttctaatattaaattgagtgaggggtaccttaca
cttgcacgagatattgaggtcatggagccaaaatctccagaagacatatataaggttcat
ttgattgatggccgaggggctacaagctccagtcttgattccgcaagacagaatctggcg
gcaacatttgtcaatgcattcgtgaatgctggatttggccaggataaactcatgaccaca
ccatcagattcttcaagcagtggttcttctggaaactggttattcaagaacaaggaacat
gggaaagctagtgcagccgctagcctgggaatgattcttctgtgggattctgattcagga
cttgcccaacttgacaagtacctgcacagcaatgatattcatgttgttgctggggctttg
ctagggattggaattgtttcttgtggtgtgaagagtgactgtgatccggcatttgctctc
atttctgagtatttcagcagggatgagtcaattatacgaattggagcaatccttggtctt
ggtattgcttatgctggctcccagaaagaggaggttagagagaatctcacagcttttctg
actgactcccaagtacctctggaggtcttggtcttctctgccatctccttaggtttggtg
ttcgttggttcctgtaatgaagaggttgcacagacaatcatatgcgtcttaatggagcgt
agtgaaccagagcttgcagagccaattatgcgcttgcttcctgttgcccttggccttcta
tatcttggaaagcaggaaagtgtggaggcgactgcagaggtttctaaaacctttgatgag
aagataaggaattattgtgacgtgacattgatgtcactggcatatgctgggacagggaac
gtgcttaaggttcagaaactccttggaatttgctccgagcatcttgagaaaggtgaaacc
caccaagggccagcagttcttggaatctccctaattgccatggctgaagaattaggggcg
gaaatggctgtacgttcccttgagcgtcttttacagtatggcgagcagaatattagaagg
gcggttcctctagctctgggtttgctttgcatatccaatccaaaggtaaatgttatggac
acaatgagtagactgagccatgatgcagatgcggaagtttctatggctgcaatcatctcc
ctgggcttgataggggctggtacaaacaatgcccgtatagctgggatgcttcggaacctc
tcaagttattattacaaagaagcaggacatctgttttgtgtgaggattgctcaaggtctt
gttcaccttgggaagggtttgctgaccctttcaccatatcactctgaccggttccttctg
tcccccatagcacttgctggtcttgtgacggttctgcatgcctgtcttgacatgaaatcc
atcattctggggaagtaccattacatgctttatatccttaccctagctatgcagcctagg
atgctattgactgtggatgaggatctcaagcccctctctgttccggtacgtgttggccaa
gcagttgatgtcgtcggtcaggcaggtagacccaagacaatcactggattccagacacat
tcaacgcctgtattacttgctgcaggggagcgagcagagctggcaactgaaaaatatctt
ccactgacaccagttcttgagggttttgtgatcctaaggaagaacccagaataccatgaa
gattaa

KEGG   Oryza sativa japonica (Japanese rice): 4346741
Entry
4346741           CDS       T01015                                 
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 2 homolog A
  KO
K03028  26S proteasome regulatory subunit N1
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03050  Proteasome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    4346741
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:osa03051]
    4346741
Proteasome [BR:osa03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     4346741
SSDB
Motif
Pfam: RPN1_RPN2_N PC_rep RPN1_C HEAT_2 ATP-cone
Other DBs
NCBI-GeneID: 4346741
NCBI-ProteinID: XP_015612484
UniProt: Q0J2L4 Q6K2Q1
LinkDB
Position
9:join(13953564..13953674,13953757..13953857,13954435..13954555,13954641..13954700,13954930..13954997,13955532..13955574,13956060..13956125,13956280..13956318,13956435..13956517,13956620..13956731,13956810..13956890,13957040..13957198,13957305..13957412,13957478..13957582,13957673..13957813,13957915..13958019,13958113..13958334,13959525..13959638,13959738..13959953,13960281..13960340,13960421..13960534,13960643..13960728,13960812..13960920,13961007..13961185,13961265..13961337)
AA seq 891 aa
MPPRKDPNGGAFPSEPAPPQPAKAKGKKKDENKDDDLSEEDQALKEQLELYVVRAQDPDP
GVQKLALESMRQEIRSATSSMTSVPKPLKFLRPHYGILKAYFETMPESELKKYMADILSV
LALTMSAEGERESLKYRMIGSEGDIGSWGHEYVRNLAGEIAQEFQKRQDDGMTTDSLKEL
VEQIVSFHMKHNAEPEAVDLLMEVEKLDLLVKHVDSTNYKRTCLYLTSSSKYLPAPDDMS
ALKIAFEIYMKFGDFANALRIALLLDDKSLELKQIFTATDDFHLKKQFAFIIARHGLSTD
IDDDIAADENEKEALQDIISNIKLSEGYLTLARDIEVMEPKSPEDIYKVHLIDGRGATSS
SLDSARQNLAATFVNAFVNAGFGQDKLMTAPSDSSGSGSSGNWLFKNKEHGKASAAASLG
MILLWDSDSGLAQLDKYLHSNDIHVVAGALLGIGIVSCGVKSDCDPAFALISEYFSRDES
IIRIGAILGLGIAYAGSQKEEVRENLTAFLSDSQVPLEVLVFAAISLGLVFVGSCNEEIA
QTIICVLMEHSEPELAEPIIRLLPVALGLLYLGKQESVEATAEVSKTFDEKIRNYCDVTL
MSLAYAGTGNVLKVQKLLGICSEHLEKGETHQGPAVLGISLISMAEELGAEMAVRSLERL
LQYGEQNIRRAVPLALGLLCISNPKVNVMDTMSRLSHDADAEVSMAAIISLGLIGAGTNN
ARIAGMLRNLSSYYYKEAGHLFCVRIAQGLVHLGKGLLTLSPYHSDRFLLSPIALAGLVT
VLHACLDMKSIILGKYHYMLYILALAMQPRMLLTVDEDLKPLSVPVCVGQAVDVVGQAGR
PKTITGFQTHSTPVLLAAGERAELATEKYLPLTPVLEGFVILRNNPEYHED
NT seq 2676 nt   +upstreamnt  +downstreamnt
atgccgccgcgcaaggaccccaacgggggcgccttcccctcggagcccgccccgccgcag
ccggccaaggccaaggggaagaagaaggatgagaacaaggacgacgacctgtcggaggag
gaccaggcgctcaaggagcagctcgagctctacgtggtgcgggcgcaggaccccgatccc
ggcgtccagaagctcgccctcgagagcatgaggcaggagatccgttctgcgacaagttca
atgacctctgtcccaaagcctctcaaattccttcgcccgcactatggaattctcaaggct
tactttgagacaatgccagaatctgagctgaagaagtatatggctgatatcttgtcagta
ttggccctgacaatgtccgctgaaggagaaagagagagcctcaagtaccgaatgataggc
tctgaaggtgacattggttcatggggtcatgaatatgtgagaaacttggctggtgaaatt
gcacaggaattccagaagcgccaggatgatggcatgacaactgattccctgaaggaactg
gtggagcaaattgtttcattccacatgaagcataatgctgaacctgaagctgtggatctc
ctaatggaggtcgaaaagcttgatttgctagttaagcacgttgactccacaaactacaaa
aggacctgcttgtacctcactagttcttctaaatatcttcctgctcctgatgacatgtcg
gcacttaaaatagcttttgagatttacatgaaatttggagattttgcaaatgctttgcgt
attgcacttctgcttgatgacaagtctctggagttgaagcagatttttacagcaactgat
gattttcacctgaagaagcaattcgcgtttatcatagcacgccatggtttaagcaccgac
attgatgatgacatagctgcagatgaaaatgagaaggaggctttgcaggacataatttct
aatattaaattgagtgaggggtaccttacacttgcacgagatattgaggtcatggagcca
aaatctccagaagacatatataaggttcatttgattgatggccgaggggctacaagctcc
agtcttgattctgcaagacagaatctggcggcaacatttgtcaatgcattcgtgaatgct
ggatttggccaggataaactcatgaccgcaccatcagattcttcgggcagtggttcttct
ggaaactggttattcaagaacaaggaacatgggaaagctagtgcagccgctagtctggga
atgattcttctgtgggattctgattcaggacttgcccaacttgataagtacctgcacagt
aatgatattcatgttgttgctggggctttgctaggtattggaattgtttcttgtggtgtg
aagagtgactgcgatccggcatttgctcttatttctgagtatttcagcagggatgagtca
attatacgaattggagcaatccttggtcttggtattgcttatgctggctcccagaaagag
gaggttagagagaatcttacagcttttctgagtgactcccaagtacctctggaggtctta
gtcttcgctgccatctccttaggtttggtgttcgttggttcttgtaatgaagagattgca
cagacaatcatatgtgtcttaatggagcatagtgagccagagcttgcagagccaattata
cgcttgcttcctgttgcccttggccttctatatcttggaaagcaggaaagtgtggaggcg
accgctgaggtttctaaaacctttgatgagaagataaggaattattgtgacgtgacactg
atgtcgctggcatatgctgggacagggaacgtgcttaaggttcaaaaactccttggaatc
tgttccgagcatcttgagaaaggtgaaacccaccaaggaccagcagttcttggaatctcc
ctaatttccatggctgaagaattaggggcggaaatggctgtacgttcccttgaacgtctt
ttacagtatggcgagcagaatattagaagggcggttcctctagctctgggcttgctttgc
atatccaatccaaaggtaaatgttatggacacaatgagcagactgagccatgatgcagat
gcggaagtttctatggctgcaataatctccctgggcttgataggggctggtacaaacaat
gcccgaatagctgggatgcttcggaacctctcaagttattattacaaagaagcaggacat
ctgttttgtgtgaggattgctcaaggtcttgttcaccttgggaagggtttgctgaccctt
tcgccatatcactctgaccggttccttctgtcccccatagcacttgctggtcttgtgacg
gttctgcatgcctgccttgacatgaaatccatcattctggggaagtaccattacatgctt
tatatccttgccctagctatgcagcctcggatgctattgactgtggatgaggatctcaag
cccctctctgttccggtttgtgttggtcaagcagttgacgtcgtcggtcaggcgggtcga
cccaagacaattactggattccagacgcattcaacgcctgtattacttgccgcaggggaa
cgagcagagctggcaactgaaaaatatcttccactgacaccagttcttgagggttttgtg
atcctaagaaataacccagagtatcatgaagattaa

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