Oryza sativa japonica (Japanese rice) (RefSeq): 4329112
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Entry
4329112 CDS
T01015
Name
(RefSeq) uncharacterized protein LOC4329112 isoform X1
KO
K08507
unconventional SNARE in the endoplasmic reticulum protein 1
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
4329112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4329112
Membrane trafficking [BR:
osa04131
]
SNARE
SNAP-25[C] (Qc)
Use1
4329112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Use1
BORCS6
LMBR1
MASE10
DUF2207_C
ASPP1-2_RA
Motif
Other DBs
NCBI-GeneID:
4329112
NCBI-ProteinID:
XP_015625914
LinkDB
All DBs
Position
2:11970564..11973645
Genome browser
AA seq
238 aa
AA seq
DB search
MVLSKVEVNLIRLLEAAPRQQNQTKLVHYVTTARELLEQLGSETTPEGISSVSKAKTSEY
SEKIEALAARLAAPEPENEMPVDENREVESSYEGDKPGSPISLSSGLRRRPIAHNVVGPS
SHERKDRDIGAPIKLDEEAQAHIEKHRKLQEDLTDEMVELARQLKESSLTMHQSVQETEK
ILDSTERAVEHSLASTGRATTRAAEVYSLASKTTCFQWLLIFMMTCMFIMVVLLIRVT
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggtgcttagcaaggttgaagtgaacttgataaggctgcttgaggcagctcctcgacag
cagaaccagactaagcttgtccattatgtaaccacagccagggaactgttggagcagcta
ggatcagaaactactccagaagggatatcaagtgtatcaaaagctaagacaagtgagtat
tcagaaaagattgaagcattggctgcccggcttgctgctccagagccagaaaatgaaatg
ccagttgatgagaatagagaggtagaaagctcttatgaaggagataagccaggaagtcca
atatcattatcatcaggattacgtaggagaccaatagctcacaacgttgttggacctagc
agtcatgagagaaaagacagagacattggagcacctattaaattggatgaagaagcacag
gctcatattgagaagcataggaagctgcaagaagatctgactgacgaaatggttgagtta
gcgcgccaactgaaagagagcagtctcaccatgcaccaatctgttcaagaaacagagaag
atccttgattccaccgagagagctgtcgagcatagcttggcgagcactgggcgtgcaacc
acgcgagcggcagaggtatactcgctggcttccaagacgacatgcttccagtggctgctc
atcttcatgatgacctgcatgttcattatggtggttctgctcatccgggtcacctaa
Oryza sativa japonica (Japanese rice) (RefSeq): 4346146
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Entry
4346146 CDS
T01015
Name
(RefSeq) uncharacterized protein LOC4346146 isoform X1
KO
K08507
unconventional SNARE in the endoplasmic reticulum protein 1
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
4346146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4346146
Membrane trafficking [BR:
osa04131
]
SNARE
SNAP-25[C] (Qc)
Use1
4346146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Use1
BORCS6
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
4346146
NCBI-ProteinID:
XP_015650000
LinkDB
All DBs
Position
8:26606414..26609538
Genome browser
AA seq
342 aa
AA seq
DB search
MFEGLKIDLFLIGIPYRPNRSCNTQSSLLWSIGFPFAGIRSSRPPPPSAGRFPFAAGSKI
RRRGLVGICPHPWTRLAPLLIAPPRVDALRAASSHKYVTTARELLEQLGAETTPEGISSV
SKAKISEYSEKIEALAARLAVPEHMVYFVFSSNKINLLFRTCSHNNSYRLYFSLIFFVQP
ENEVPVDENREVESSYEGEKPGSPISLSSGLRRRPIAHTDVGPSSHARKDRDIGAPIKLD
AEAQAHIEKHRKLQEDLTDEMVELARQLKESSLTMHQSVQETEKILDSTERAVEHSLAST
GRAATRAAEVYSLASKTTCFQWLLIFMMTCMFIMVVLLIRVT
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagggacttaaaatagacttattcctaatcggaatcccgtatcggcccaacaga
agttgcaatacccagtcatccctcctctggtcgattggattccccttcgctggcatccgc
tcgtccagaccaccgccgccgtccgccggccgcttccccttcgccgccgggagcaagatc
aggcggcgggggctcgtcgggatctgcccccatccatggactcgcttggcgccgcttctg
attgctccgcctcgcgttgatgcgctgcgcgcggcatcgagccacaagtatgtaaccaca
gccagggaattgttggagcagctaggagcagaaactactccagaagggatatcaagtgta
tcaaaagctaagataagtgagtattcagaaaagattgaagcattggctgcccggcttgct
gttccagagcatatggtttactttgttttttcttcaaacaaaatcaacttacttttcaga
acatgcagccacaataactcatatagattatacttttcattgattttttttgttcagcca
gaaaatgaagtgccagttgatgagaatagagaggtagaaagctcttatgaaggagaaaag
ccaggaagtccaatatcattatcatcaggattacgtaggagaccaatagctcacaccgat
gttggacctagcagtcatgcgagaaaggatagagacattggagcacctattaaattggat
gcagaagcgcaggctcacattgagaagcataggaagctacaagaagatctgactgacgaa
atggttgagttagcacgccaactgaaagagagcagtctcaccatgcaccaatctgttcaa
gaaacagagaagatccttgattccaccgagagagctgttgagcatagcttggcgagcact
gggcgtgcagccacgcgagcagcagaggtgtactcgttggcttccaagacgacatgcttc
cagtggctgctcatcttcatgatgacatgcatgttcattatggtggttttgctcatccgg
gtcacctga
Oryza sativa japonica (Japanese rice) (RefSeq): 9271609
Help
Entry
9271609 CDS
T01015
Name
(RefSeq) uncharacterized protein LOC9271609 isoform X1
KO
K08507
unconventional SNARE in the endoplasmic reticulum protein 1
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
9271609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
9271609
Membrane trafficking [BR:
osa04131
]
SNARE
SNAP-25[C] (Qc)
Use1
9271609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Use1
BORCS6
LMBR1
MASE10
DUF2207_C
ASPP1-2_RA
Motif
Other DBs
NCBI-GeneID:
9271609
NCBI-ProteinID:
XP_015650004
LinkDB
All DBs
Position
8:26658479..26661536
Genome browser
AA seq
238 aa
AA seq
DB search
MVLSKVEVNLIRLLEAAPRQQNQTKLVHYVTTARELLEQLGSETTLEGISSVSKAKTSEY
SEKIEALAARLAAPEPENEMPVDENREVESSYEGDKPGSPISLSSGLRRRPIAHNVVGPS
SHERKDRDIGAPIKLDEEAQAHIEKHRKLQEDLTDEMVELARQLKESSLTMHQSVQETEK
ILDSTERAVEHSLASTGRATTRAAEVYSLASKTTCFQWLLIFMMTCMFIMVVLLIRVT
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggtgcttagcaaggttgaagtgaacttgataaggctgcttgaggcagctcctcgacag
cagaaccagactaagcttgtccattatgtaaccacagccagggaactgttggagcagcta
ggatcagaaactactctagaagggatatcaagtgtatcaaaagctaagacaagtgagtat
tcagaaaagattgaagcattggctgcccggcttgctgctccagagccagaaaatgaaatg
ccagttgatgagaatagagaggtagaaagctcttatgaaggagataagccaggaagtcca
atatcattatcatcaggattacgtaggagaccaatagctcacaacgttgttggacctagc
agtcatgagagaaaagacagagacattggagcacctattaaattggatgaagaagcacag
gctcatattgagaagcataggaagctgcaagaagatctgactgacgaaatggttgagtta
gcgcgccaactgaaagagagcagtctcaccatgcaccaatctgttcaagaaacagagaag
atccttgattccaccgagagagctgtcgagcatagcttggcgagcactgggcgtgcaacc
acgcgagcagcagaggtatactcgttggcttccaagacgacatgcttccagtggctgctc
atcttcatgatgacctgcatgttcattatggtggttctgctcatccgggtcacctaa
DBGET
integrated database retrieval system
