KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4329182
Entry
4329182           CDS       T01015                                 
Name
(RefSeq) 26S protease regulatory subunit 6B homolog
  KO
K03063  26S proteasome regulatory subunit T3
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03050  Proteasome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    4329182
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:osa03051]
    4329182
Proteasome [BR:osa03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     4329182
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB AAA_lid_3 AAA_5 AAA_16 AAA_2 DUF815 AAA_22 RuvB_N AAA_18 AAA_28 TIP49 RNA_helicase Mg_chelatase Sigma54_activat AAA_14 IstB_IS21 AAA_24 TsaE TniB AAA_7 AAA_30 AAA_33 NACHT DUF5906 AAA_25 Parvo_NS1 NTPase_1 AAA_3 ATPase DUF6570 NB-ARC AAA_11 Sigma54_activ_2
Other DBs
NCBI-GeneID: 4329182
NCBI-ProteinID: XP_015626952
UniProt: A0A0P0VIC3 Q6Z875
LinkDB
Position
2:13059108..13063810
AA seq 419 aa
MSTAATAPPPAAVLPAAPPPSYPATSAPSASAAAAEDDDDLYGRLKSLQRHMEFVEIQEE
YVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDGNNGIVGSTTGSNYYVRILSTI
NRELLKPSASVALHRHSNALVDVLPPEADSSISLLGSSEKPNVTYTDIGGCDIQKQEIRE
AVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKY
LGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGF
DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVD
LEDYVSRPDKISAADIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPETDFDFYK
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgtcgaccgccgccaccgccccgccgcccgccgcggtcctcccggcggctcccccgccg
tcctaccccgccacctccgcgccctccgcctccgcggccgccgccgaggacgacgacgac
ctctacggccgcctcaagtcgctccagcgccacatggagttcgtcgagatacaggaggag
tacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcaggaggaggtg
aagcggatccagtccgttcccctcgtgatcggccagttcatggagatggtcgacggcaac
aacggaatcgtcggatccaccaccgggagcaactattatgtgcggatcctgagcaccatc
aaccgcgagctgctcaagccctcggcgtccgtggcgctgcaccgccactcgaatgcgctc
gtcgacgtgctgccgcccgaggcggactccagcatctctctgctcggatcatcggagaag
cccaacgtcacttatacggatattggaggatgtgacatccaaaaacaagaaattcgggag
gctgttgaattaccgctgacacatcatgagctgtacaagcagattggtattgatcctcca
agaggtgtgcttctgtatggtccacctggaactggcaaaactatgctcgccaaagctgtg
gcacaccacactactgctgcatttatcagagttgttggttcagagtttgtgcagaagtac
ctgggtgagggacctaggatggttcgagatgtattccgtttggctaaagagaatgcccca
gctatcatattcatcgatgaggttgatgctatagcaactgctcgttttgatgctcagact
ggtgctgaccgagaagttcagcgtattcttatggaactactcaatcagatggatggattt
gatcaaacagtgaatgtgaaggttataatggcgaccaacagggcggataccctagaccct
gctctgttacgtccaggtagattggacaggaaaatcgagttccctcttccagatcgtcgg
cagaagaggcttgttttccaagtctgtactgctaaaatgaacttgagtgatgaggttgat
ttggaagattatgtttccagaccagataaaattagtgctgctgatattgctgctatctgt
caagaagctggtatgcatgctgtgcgcaaaaatcggtatgttatcctccccaaggacttc
gagaagggttaccgaaccaatgtcaagaagcctgagactgactttgacttctacaaatga

KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4347848
Entry
4347848           CDS       T01015                                 
Name
(RefSeq) 26S protease regulatory subunit 6B homolog
  KO
K03063  26S proteasome regulatory subunit T3
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03050  Proteasome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    4347848
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:osa03051]
    4347848
Proteasome [BR:osa03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     4347848
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB AAA_lid_3 AAA_2 AAA_5 AAA_16 TsaE RuvB_N AAA_22 Sigma54_activat AAA_14 TIP49 AAA_18 AAA_33 DUF815 IstB_IS21 Mg_chelatase Prot_ATP_OB_N NACHT AAA_7 AAA_24
Other DBs
NCBI-GeneID: 4347848
NCBI-ProteinID: XP_015612481
UniProt: A0A0P0XQS8 Q653Q8
LinkDB
Position
9:22260390..22262189
AA seq 448 aa
MALRPPRPCPAGVQQRQHDVDGAGNAKTSPEQKLELLDLQEEDDELIFLDADDEEGRQLR
EKLESLEREFCLLDEQRDNALFQIHVLEETVRFREELVRRLTAVTPLVVAQLDEVVDEHH
AVVTLGDGCERKMCVGVAGSLDRGLLKPSANVALNGRSLALVGVPPSDVAACSAARFLVA
DADKPGVAYDDIGGCEAQKREVREAVELPLTHPELFAAAGVDPPRGVLLHGPLGTGKTML
AKAVARETSAAFFRVNAAELARHDGPRVVRDLFRLARDMAPAIVFIDEVDAIAAARQGGD
DDDGGARRHVQRVLIELLTQMDGFDESTNVRVIMATNRADDLDPALLRPGRLDRKVEFTA
PESPEEKRLVLQTCTAGMSLDGDVDLDALAARRDKLSAAEIAAVCRKAGMQAVRDRRGAV
TADDFDKGYLAVVGKKPGDAATEFHFYN
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggcgctccgaccaccgcggccgtgtccggccggcgtgcagcagcggcagcacgacgtc
gacggcgccggcaacgccaagacttccccggaacagaagctcgagttgctggacctgcag
gaggaggacgacgagctcatcttcctcgacgccgacgacgaggagggacgccagctgcgc
gagaagctggagtcgctggagcgggagttctgcctgctggatgagcagcgggacaacgcg
ctgttccagattcacgtgctggaagagacggtgcgcttccgcgaggagctcgtcaggcgg
ctgacggcggtcacccccctcgtcgtcgcccagctcgacgaggtcgtcgacgagcaccac
gccgtcgtgacgctgggcgacggatgcgagaggaagatgtgcgtcggcgtcgccggctcg
ctcgaccgcggcctcctcaagccctcggcgaacgtcgcgctgaacggccggtcgctcgcg
ctcgtcggcgtgcccccctccgacgtcgccgcctgctcggccgcgcggttcctcgtcgcg
gacgccgacaagccgggcgtcgcctacgacgacatcggcgggtgcgaggcgcagaagcgg
gaggtgcgcgaggccgtggagctgccgctgacgcacccggagctcttcgccgccgccggc
gtcgacccgccgcgcggcgtgctcctgcacggcccgctgggcaccgggaagaccatgctc
gccaaggccgtcgcgcgggagacctcggcggcgttcttccgcgtgaacgccgccgagctc
gcgcggcacgacgggccgagggtggtgcgcgacctgttccggctcgccagggacatggcg
ccggccatcgtcttcatcgacgaggtggacgcgatcgcggcggcgcggcaaggcggcgac
gacgacgacggcggtgccaggcgccacgtgcagcgcgtgctgattgagctgctcacccag
atggacggcttcgacgagtccaccaacgtgcgggtgatcatggcgacgaaccgcgccgac
gacctggacccggcgctgctccggccggggcggctggaccgcaaggtcgagttcacggcg
cccgagagcccggaggagaagcggctggtgctgcagacgtgcacggcggggatgagcctg
gacggcgacgtcgacctcgacgccctggcggcgcggcgcgacaagctcagcgccgccgag
atcgccgccgtgtgccgcaaggccggcatgcaggccgtgcgcgacaggcggggcgccgtg
acggcggacgacttcgacaagggatacctcgccgtcgtcggcaagaagcccggcgacgcc
gccaccgagttccacttctacaactga

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