Oryza sativa japonica (Japanese rice) (RefSeq): 4329639
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Entry
4329639 CDS
T01015
Name
(RefSeq) N-glycosylase/DNA lyase OGG1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
4329639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
osa03400
]
4329639
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.-
4329639
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
4329639
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
4329639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
Motif
Other DBs
NCBI-GeneID:
4329639
NCBI-ProteinID:
XP_015627252
UniProt:
A0A0P0VKE7
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Position
2:complement(20840735..20851084)
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AA seq
416 aa
AA seq
DB search
MGCHPPLPTVAAAAAAGMPPRRRRRVRPPLPPSPPLLSSTTATPPPTPPVGTPKSEAADR
RPPPARRRLPLVSAAAVEEEDGEWHPLPLSAADLSLPLTLPTGQTFLWRRTSLSPLRFTG
AVGPHLVSLSHLPSSDGRLAFLLHNNGGSSSSSVPAAARAALSDYLNAAVPLADLWRRFA
AADARFAEVSARLGGGGARVLRQDPVECVFQFLCSSNNNIARIEKMVWALAGYGERLGEV
GGYQFHQFPTIERLARVSEQELRDAGFGYRAKYIVGTAKILQAKPGGGEKWLASLRTREL
PEVIEALCTLPGVGPKVAACVALFSLDQNHAIPVDTHVWKVATQYLMPELAGKSLTPKLS
VAVADAFVAKFGNYAGWAQNVLFIGQLSAQKLMVAETTNTSTKPTKRKRSGNNVKT
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggggtgtcatcctccccttccgaccgttgccgccgccgccgccgccgggatgccacct
cgccgccgccgccgagtccggccgccgctcccaccctcccctcccctcctctcttccacc
accgcaacaccaccgccaaccccgcccgtgggcacccccaaatccgaggccgccgaccgc
cgccctcctcccgcccgccgccgcctccccctcgtctccgccgccgccgtcgaggaggag
gacggagagtggcaccccctgccgctctccgccgccgacctgtccctcccgctcaccctc
cccacggggcagaccttcctgtggcgccgcacgtctctctccccgctccgcttcaccggc
gccgtggggcctcacctcgtctccctctcccacctcccgtcctccgacggccgcctcgcc
ttcctcctccacaacaacggcggctcctcctcctcctccgtccccgcggcggcccgcgcc
gcgctctccgactacctcaacgccgccgtgccgctcgccgacctctggcgccggttcgcc
gccgcggacgcgcggttcgcggaggtctccgcgcggctcgggggcggcggcgcccgggtg
ctcaggcaggaccccgtcgagtgcgtgttccagttcctctgctcctccaacaacaacatc
gcgcggatcgagaagatggtgtgggcgctggccggctacggggagcggctcggcgaggtt
ggaggataccaattccaccaattccccacgatcgagcggctcgcgcgcgtgtcggagcaa
gagctccgggatgccgggttcgggtacagggcaaagtacatcgtcggcactgctaaaata
ttacaggccaagcctggtggaggcgagaaatggcttgcctcattgcgtacaagggaactc
ccggaggtgattgaggctctttgcacccttccaggtgttgggccaaaagttgcagcctgt
gttgctttgttctcactcgatcagaaccatgctattcctgttgacacacatgtctggaag
gttgctacacaatatctgatgccggagctagctggcaagagcttaaccccaaaacttagt
gttgctgttgccgatgcatttgttgctaaatttgggaactatgctggttgggcacagaat
gttctctttattggccagctgtctgctcaaaaactcatggttgctgaaactacaaacact
tccacgaaacctactaaaaggaagcgtagtggaaacaatgtcaaaacatga
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