Oryza sativa japonica (Japanese rice) (RefSeq): 4330068
Help
Entry
4330068 CDS
T01015
Name
(RefSeq) replication protein A 32 kDa subunit B isoform X2
KO
K10739
replication factor A2
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03030
DNA replication
osa03420
Nucleotide excision repair
osa03430
Mismatch repair
osa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
4330068
03420 Nucleotide excision repair
4330068
03430 Mismatch repair
4330068
03440 Homologous recombination
4330068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
osa03032
]
4330068
03400 DNA repair and recombination proteins [BR:
osa03400
]
4330068
DNA replication proteins [BR:
osa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
4330068
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
4330068
MMR (mismatch excision repair)
4330068
DSBR (double strand breaks repair)
HR (homologous recombination)
4330068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
RMI2
SnoaL_4
PCI
Motif
Other DBs
NCBI-GeneID:
4330068
NCBI-ProteinID:
XP_015625648
UniProt:
Q6H7J5
A0A7D5BIZ9
LinkDB
All DBs
Position
2:complement(25404409..25408583)
Genome browser
AA seq
298 aa
AA seq
DB search
MYGVGVGGGGGGNYDGGGGNASSLFGGGGFMPSQATNAAEGTSGGGGGFPKSRNAQALLP
LTVKQIMDASQTNDDKSNFAVNGMEVSTVRLVGRMLNKLDRVTDVSFTLDDGTGRVPVNR
WENDSTDTKEMADIQNGDYVIVNGGLKGFQGKRQVVAYSVRRITNFNDVTHHFLHCVHVH
LELTRPKSQVNANTATGTPNQTMPRDSMAYNQSPLTNQASTFSAPQNTGTGTNMIDLVLN
VFHDPAVMNDDHGVGVDYVSRRLNLPEETVGKIIIDQVDLGHLYATIDDHHYKSTMNG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcgtcggcgtcggcggcggcggcggcgggaactacgatggcgggggagggaac
gccagctccctcttcggcggcggcggattcatgccctcgcaggcgaccaacgccgcggag
gggaccagcggcggcggcggcggcttccccaagagtcggaacgcccaggcgctgctcccg
ctcaccgtgaagcagatcatggacgcgtcccagaccaacgacgacaagtcgaattttgct
gtcaatggcatggaggtgtccacggttaggcttgtaggacgcatgttaaataagcttgat
cgggttacggatgtatcattcactcttgatgatggtacaggcagggtacctgtgaatcgc
tgggaaaacgatagcactgatactaaggagatggctgacattcagaatggtgactatgtt
attgtcaatggtggtctaaaaggttttcaagggaagcgtcaggtggttgcttactctgtg
aggcgtataaccaacttcaatgatgtaacacatcactttcttcactgcgttcatgtgcac
ttggagcttaccaggccgaagtcccaagtaaatgctaatacagcaacaggaactcctaac
caaactatgcctagggatagcatggcgtataaccaaagtccacttactaatcaggcctca
acattttctgcaccacaaaatactggtactggaacaaatatgatcgacttggtcttgaat
gtttttcatgacccagcagttatgaatgatgaccatggagtaggcgtagattatgtgagc
cgtcgtcttaatctaccagaggaaacagtcgggaaaatcattatagaccaagttgatctg
ggacatttgtatgccactatcgatgaccaccattacaagtccacaatgaatggttga
Oryza sativa japonica (Japanese rice) (RefSeq): 4331236
Help
Entry
4331236 CDS
T01015
Name
(RefSeq) replication protein A 32 kDa subunit A
KO
K10739
replication factor A2
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03030
DNA replication
osa03420
Nucleotide excision repair
osa03430
Mismatch repair
osa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
4331236
03420 Nucleotide excision repair
4331236
03430 Mismatch repair
4331236
03440 Homologous recombination
4331236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
osa03032
]
4331236
03400 DNA repair and recombination proteins [BR:
osa03400
]
4331236
DNA replication proteins [BR:
osa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
4331236
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
4331236
MMR (mismatch excision repair)
4331236
DSBR (double strand breaks repair)
HR (homologous recombination)
4331236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
RMI2
Sfi1_C
Motif
Other DBs
NCBI-GeneID:
4331236
NCBI-ProteinID:
XP_015624204
UniProt:
Q6K9U2
LinkDB
All DBs
Position
2:complement(35639825..35642608)
Genome browser
AA seq
279 aa
AA seq
DB search
MMSFSQPDAFSPSQFTSSQNAAADSTTPSKSRGASSTMPLTVKQISEAQQSGITGEKGAP
FVVDGVETANVRLVGLVSGKTERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQNGM
YVSVIGSLKGLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQIGSPAKTYSAM
GSSSSNGFSEMTTPTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREPANVESEHGVHIDEI
VKRFRLPEAKIKVAIDYLADIGHIYSTIDESHYKSAFNE
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccttcagccagcccgacgccttctcgccgtcgcagttcacctcctcccagaat
gccgccgccgactctaccaccccttccaagagccggggcgcatcgagcaccatgccgctc
accgtgaagcagatctctgaagcgcagcaatctggcatcaccggggagaagggcgctccc
ttcgtcgtcgacggcgtcgagacagccaacgttaggcttgtgggattggtcagtggcaag
acggagcggaacaccgatgtgtccttcacgatcgacgatggcaccggccgcctcgatttc
atcagatgggtcaatgatggtgctgattctgctgaaaccgctgctgttcagaatggaatg
tatgtttctgtcattggtagcctcaaggggcttcaggagaggaagcgtgctactgctttc
gctatcaggcctgtaactgattataatgaggtcacactgcatttcattcagtgcgtgcga
atgcatttagagaacaccaaatcacagattggtagccctgcaaaaacatattctgccatg
ggatcctcatcttccaatggcttcagtgaaatgaccactccgacctctgtgaaatccaac
ccggcaccagtgctcagtgtaacaaatggatcaaaaactgatttgaacacagaagtgctg
aatgttttccgcgaaccagcaaacgtcgagagcgagcatggtgtgcacattgatgaaatc
gtgaagcgcttcaggctaccggaggccaagatcaaggtagctattgattacctcgctgac
attgggcacatatactcaacaatcgacgagtctcactacaagtcagcgttcaatgaataa
DBGET
integrated database retrieval system
