Oryza sativa japonica (Japanese rice) (RefSeq): 4330430
Help
Entry
4330430 CDS
T01015
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4330430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4330430
03036 Chromosome and associated proteins [BR:
osa03036
]
4330430
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
APC/C
Target recognizing subunit
4330430
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
4330430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Ge1_WD40
RMC1_N
NBCH_WD40
WDR54
DPPIV_N
WD40_like
Motif
Other DBs
NCBI-GeneID:
4330430
NCBI-ProteinID:
XP_015622694
UniProt:
Q0DYD7
Q6Z8D3
LinkDB
All DBs
Position
2:28802793..28805779
Genome browser
AA seq
469 aa
AA seq
DB search
MDAGSHSISSEKSHGLAPRPPLQEAGSRPYMPSLSTASRNPSAKCYGDRFIPDRSAMDMD
MAHYLLTEPKKDKENAAASPSKEVYRRLLAEKLLNNRTRILAFRNKPPEPENVSAADTAS
THQAKPAKQRRYIPQSAERTLDAPDLVDDYYLNLLDWGSKNVLSIALGDTVYLWDASSGS
TSELVTVDEDSGPITSVSWAPDGQHVAVGLNSSDIQLWDTSSNRLLRTLRGVHESRVGSL
AWNNNILTTGGMDGNIVNNDVRIRNHVVQTYQGHSQEVCGLKWSGSGQQLASGGNDNLLH
IWDVSMASSVPSAGRNQWLHRLEDHTAAVKALAWCPFQSNLLATGGGGSDRCIKFWNTHT
GACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLFM
AQSPDGCTVASAAADETLRFWNVFGSPEAPKPAAKASHTGMFNSFNHLR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaggctcccactcgatctcgtcggagaagagccacggactcgcgccgcggccg
ccgctccaggaggccggctcccgcccgtacatgccatcgctgagcactgcctcgcgcaac
ccgtcggccaagtgctacggggataggttcataccggacaggtcggcgatggacatggac
atggcgcactacctgctcacggagcccaagaaggacaaggagaacgcggcggcgtccccg
tccaaggaggtgtaccggaggctgctcgccgagaagctgctcaacaaccggacacggatc
ctcgccttccggaacaagccaccggagcccgagaacgtctctgccgcggatactgcttct
acccaccaggccaagccggccaagcagcggcgctacattccccagtctgccgagaggact
ctggatgcaccggacctcgtcgacgattactatctcaacctgctggactggggaagcaag
aacgtgctgtccattgcgctgggcgacacggtgtacctgtgggacgcctcgagcggatcc
acatctgagctcgtgaccgtggacgaggacagcggcccgatcaccagcgtcagctgggct
cctgacggccagcatgtcgccgttggcctcaactcttccgacatccagctctgggacacc
agctccaaccgactgcttagaactctgagaggtgtgcacgaatcaagagtcggttcactc
gcatggaacaacaacatcctgaccactggcggtatggacggcaacatcgtgaacaatgac
gtaagaatcaggaaccatgtcgtgcagacataccaggggcacagccaggaggtgtgcggg
ctcaagtggtctggttcagggcagcagctggccagtggtggcaacgacaaccttcttcac
atttgggatgtgtccatggcatcgtccgtcccatctgcaggccgcaaccagtggctgcac
aggctcgaggatcacacggccgctgtgaaagcgcttgcatggtgcccattccagagcaac
ctgcttgcaactggaggtggtggtagcgaccggtgcatcaagttctggaacacacacacc
ggtgcatgcttgaactctgtcgataccggatcgcaggtgtgcgctcttctatggaacaaa
aatgagagagagcttctgagttcacacggattcacgcagaaccagctgacattgtggaag
tacccgtcgatggttaagatggctgaactcactggccatacttcccgtgtccttttcatg
gctcagagtcctgatggttgcacagtagcatcggctgctgcagatgagaccctgcggttc
tggaatgtgtttggtagtcctgaagcccccaagcctgcagccaaggcttcccacactggg
atgttcaacagcttcaaccatctcagataa
Oryza sativa japonica (Japanese rice) (RefSeq): 4336870
Help
Entry
4336870 CDS
T01015
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex isoform X1
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4336870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4336870
03036 Chromosome and associated proteins [BR:
osa03036
]
4336870
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
APC/C
Target recognizing subunit
4336870
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
4336870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
Ge1_WD40
RMC1_N
NBCH_WD40
WDR54
WD40_like
Motif
Other DBs
NCBI-GeneID:
4336870
NCBI-ProteinID:
XP_015635405
UniProt:
Q0JAG9
A0A0N7KJM4
LinkDB
All DBs
Position
4:30267815..30270708
Genome browser
AA seq
504 aa
AA seq
DB search
MDAGSHSISSEKSSRYVAPRQPLQEAGSRPYMPSLSTASRNPSAKCYGDRFIPDRSAMDM
DMAHYLLTEPRKDKENAAASPAKEAYRKLLAEKILNNRTRILSFRNKPPEPESILTELRA
DAASIQAKPAKQRRYIPQSAERTLDAPELVDDYYLNLLDWGSSNVLSIALGNSVYLWDAT
NSSTSELVTVDEDNGPVTSVSWAPDGRHIAVGLNSSDVQLWDTSSNRLLRTMRGVHDSRV
GSLAWNNNILTTGGMDGKIVNNDVRIRNHVVQTYQGHQQEVCGLKWSGSGQQLASGGNDN
LLHIWDVSMASSMPSAGRTQWLHRLEDHLAAVKALAWCPFQSNLLASGGGGSDRCIKFWN
THTGACLNSIDTGSQVCSLVWNKNERELLSSHGFAQNQLTLWKYPSMVKMAELTGHTSRV
LFTAQVIFCSLYLPFKLTNIALNRLLITCLVVILQSPDGLTVASAAADETLRFWNVFGAP
EAPKTATKGSHTGMFNNSNHIHIR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggttcgcactcgatctcatcggagaagagcagccggtacgtggcgccgcga
cagccactccaggaggccggatccagaccgtacatgccatcgctgagcacggcgtcccgc
aacccgtcagccaagtgctacggtgacaggtttattccggacaggtcggcgatggacatg
gacatggcgcactacctgctgacggagccgaggaaggacaaggagaacgcggcggcgtcc
ccggccaaggaggcgtaccggaagctgctggccgagaagatcctcaacaaccgcaccagg
attctctccttccgcaacaagccgccagagcccgagagcatcctcacggagctccgtgct
gatgcggcttccatccaagccaagccggcgaagcagcgccgatacattcctcagtctgcc
gagaggactctggatgctccagagcttgttgatgattactacctcaacctactggactgg
ggaagcagcaatgtgctatccattgcgctgggcaactcggtgtacctctgggatgccacg
aacagttcaacttctgagcttgttaccgtcgatgaggacaatggccctgtcaccagcgta
agctgggctcctgatggccggcacatcgccgttggtctcaactcctccgatgtccagctc
tgggacaccagctcaaaccgactgctgaggacgatgcgaggcgtgcacgattcgagggtc
ggttcgctggcatggaacaacaacatcctcacaactggtggaatggatggcaagattgtg
aacaatgatgtgaggatcaggaaccatgttgtgcagacataccaggggcatcagcaggag
gtgtgtggcctcaagtggtcaggatcagggcagcagcttgccagtggtggcaatgacaac
ctcctgcacatatgggatgtgtccatggcatcctctatgccgtctgctggccgcacccag
tggttacacaggcttgaggatcacttggctgctgtgaaggctctcgcgtggtgcccattc
cagagcaacctgctggcatctggtggtggtgggagtgaccggtgcatcaagttctggaac
acacataccggcgcatgcctcaactcgatcgacactgggtcacaagtgtgctcgctggtc
tggaacaagaatgagagagagctgctaagctcacatggattcgctcagaatcagctcact
ttgtggaagtacccgtcaatggttaagatggctgaactcactggccatacctctcgtgtc
cttttcacggctcaggttatcttttgctccttgtacctgccgtttaaattgacaaatatt
gctctgaacagattgctgattacttgtcttgtggtaatcttgcagagccctgatggtctc
acagtagcatctgctgcagcagatgagaccctgagattctggaacgtatttggggctcct
gaagcacccaagactgcaaccaagggttcccacactgggatgttcaacaattccaaccac
attcacatccgttga
Oryza sativa japonica (Japanese rice) (RefSeq): 4346480
Help
Entry
4346480 CDS
T01015
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4346480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4346480
03036 Chromosome and associated proteins [BR:
osa03036
]
4346480
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
APC/C
Target recognizing subunit
4346480
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
4346480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Ge1_WD40
RMC1_N
WD40_like
WDR54
Motif
Other DBs
NCBI-GeneID:
4346480
NCBI-ProteinID:
XP_015611482
UniProt:
A0A8J8YIG3
B9G290
LinkDB
All DBs
Position
9:3168153..3172091
Genome browser
AA seq
478 aa
AA seq
DB search
MEAPGSGSVPTAKRRRLVPRPPPVPLEVAGARGPYMPPLCIKSKNPSAKCYGDRFIPDRS
AMDMDMAYFLLTEPKKEKENTDMLSPAEEAYKRLLAEKLLNNRSRILAFRNKPPEPEGIV
QQLLYETLTSSQTKPARKCRHIPQSSERTLDAPGIVDDFYLNILDWGCKNVMSIALGNTL
YLWNSADGSIMDLVTIDEDDGPITSVSWSCDGQWIAVGLNSSDIQLWDTSSNRMLRTLHG
VHQSRVGSLAWNKNILTTGGMDGNIVNNDVRMRSHVVHIYRGHEDEVCGLRWSGSGQQLA
SGGNDNLVHIWDVSMASSNLSLGHNRWLHRFGDHLAAVKALAWCPFQSNLLASGGGGDDR
CIRFWNTHTGLCLNSVDTGSQVCGLLWNKNEKELLSAHGYVQNSLALWKYPSMVKLAELE
DHTARVLCLAQSPDGFTVASVAADETLRLWKIFETSEDAKPVFKTVNTGMFNSFSHIR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgccgggctccggctcggtcccaacggcgaagcgccgccggctcgtgccacgg
cctccgccggtgccgcttgaggtggccggcgcgagggggccgtacatgccgccgctatgt
attaaatccaagaacccgtccgcgaaatgctacggtgacagattcatacctgataggtca
gcaatggacatggatatggcatatttcctcctgacagaacctaagaaggagaaggaaaat
actgacatgctatcaccagctgaagaagcttacaagaggcttcttgccgagaaactcctg
aacaacagaagccggattcttgcattcaggaacaaaccaccagaacctgaaggaattgtg
caacagctattatatgaaactttgacttccagtcagacaaagcctgctaggaagtgtaga
cacataccccagtcttctgagaggacgttagatgcccctgggattgttgatgacttctat
cttaacatattggactggggatgcaaaaatgtgatgtccattgcgcttgggaacaccttg
tacctctggaattcagctgatggatctattatggaccttgtaacaattgacgaagatgat
ggtcccatcactagtgttagctggtcttgtgatgggcagtggattgccgttggcctcaac
tcttctgacattcagctgtgggacaccagctctaatcgcatgctgagaacacttcatggt
gtacaccaatcaagggttggttcactggcctggaacaagaacatactgacaactggtgga
atggatggaaacattgtaaacaatgatgtcaggatgagatcccatgttgttcatatatat
cgagggcatgaggatgaggtatgtgggttgagatggtcaggaagtggccagcaattggca
agtggtggcaacgacaacctggtgcacatatgggatgtatcaatggcatcttctaatcta
tctctaggtcataaccggtggcttcatagatttggcgatcatttagctgcagtgaaggcc
cttgcatggtgtccgttccagagcaatttgcttgcatctggtggtggtggagatgatcgg
tgcatcaggttttggaatacacacactggtttatgtttgaattctgttgatactggatca
caggtgtgcggactactctggaataagaatgaaaaggagctgctaagtgctcacggatat
gtacagaattcacttgcattgtggaaatacccttcaatggttaaattggcagaacttgaa
gaccacactgctcgtgttctttgcctggctcagagccctgatggatttacagtagcctct
gttgcagcagatgagactctaaggttatggaaaatttttgaaacttctgaagatgccaaa
cccgtattcaagacagtaaacactggaatgtttaacagtttcagccatatcagatga
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integrated database retrieval system