KEGG   Oryza sativa japonica (Japanese rice): 4330910
Entry
4330910           CDS       T01015                                 
Name
(RefSeq) UMP-CMP kinase 4 isoform 1
  KO
K13800  UMP-CMP kinase [EC:2.7.4.14]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00240  Pyrimidine metabolism
osa01100  Metabolic pathways
osa01232  Nucleotide metabolism
osa01240  Biosynthesis of cofactors
Module
osa_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    4330910
Enzymes [BR:osa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.4  Phosphotransferases with a phosphate group as acceptor
    2.7.4.14  UMP/CMP kinase
     4330910
SSDB
Motif
Pfam: ADK AAA_17 AAA_18 AAA_33 Thymidylate_kin AAA_19 NB-ARC SRP54 AAA_lid_At3g28540 ATP_bind_1
Other DBs
NCBI-GeneID: 4330910
NCBI-ProteinID: NP_001403892
LinkDB
Position
2:join(33447375..33447419,33447897..33447951,33448138..33448255,33448405..33448561,33448728..33448808,33448912..33449019,33449270..33449341,33449443..33449451)
AA seq 214 aa
MGSVVDAPTVVAGQEEVTDNMLGDKKVTVVFVLGGPGSGKGTQCANIVEHFGFIHLSAGD
LLRAEIKSGSENGTMIENMIKEGKIVPSEVTIKLLQEAMIKSGNDKFLIDGFPRNEENRA
AFENVTKITPAFVLFFDCSEEEMERRLLGRNQGRVDDNIETIRKRFKVFVESSLPVIEYY
NAKDKVKKIDAAKPIPEVFEDVKAIFAPYAPNAA
NT seq 645 nt   +upstreamnt  +downstreamnt
atgggttcggttgtggatgctccaacagttgtggctggacaggaggaggtcactgacaac
atgttgggtgacaagaaagttacagttgtatttgttctaggtggtcctgggagtggaaag
ggcacacagtgtgccaacattgttgaacactttggattcattcatcttagtgctggagac
cttttgcgtgcagagatcaaatctggctctgagaacggaactatgatcgagaacatgata
aaggagggaaagattgttccatctgaggtaactataaaactcttgcaggaagccatgatt
aaaagtggaaatgataagttccttattgatggatttccaaggaacgaagagaatcgtgct
gcatttgagaacgttacaaaaataactcctgcgtttgtgctattcttcgattgttctgag
gaagagatggaaagacgtcttttgggacgcaatcagggaagagttgacgataacattgag
actatcaggaaaaggttcaaagtttttgttgaatccagtttgcctgtcattgagtactat
aatgcaaaggacaaggttaaaaagattgatgctgcaaaaccaattcctgaggtgtttgaa
gatgtcaaagccattttcgctccatatgcgccaaatgccgcttag

KEGG   Oryza sativa japonica (Japanese rice): 4334909
Entry
4334909           CDS       T01015                                 
Name
(RefSeq) uMP-CMP kinase 2 isoform 1
  KO
K13800  UMP-CMP kinase [EC:2.7.4.14]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00240  Pyrimidine metabolism
osa01100  Metabolic pathways
osa01232  Nucleotide metabolism
osa01240  Biosynthesis of cofactors
Module
osa_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    4334909
Enzymes [BR:osa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.4  Phosphotransferases with a phosphate group as acceptor
    2.7.4.14  UMP/CMP kinase
     4334909
SSDB
Motif
Pfam: ADK AAA_17 AAA_18 Thymidylate_kin
Other DBs
NCBI-GeneID: 4334909
NCBI-ProteinID: NP_001405993
LinkDB
Position
4:complement(join(366626..366632,367986..368050,368512..368619,369018..369098,369532..369688,369793..369910,370288..370336,370434..370484,370609..370704))
AA seq 243 aa
MWRRQVGALLLRHRSTPSSTLRHHLPLPVPDQSPPLASNLLLRLFTSQSGEGGDGATKPF
IAFVLGGPGSGKGTQCVRIASDFGFAHLSAGDLLRSEISTGSEKGELILNIIKEGKIVPS
EITVELIRKAMESSDAKRVLIDGFPRCEENRIAFERITGTEPDLVIFFDCPEDEMVKRLL
GRNQGRVDDNIETIKKRLKVFESLNIPVVDYYTSRGKVHKINATGTEEEIFGAVHKLFSS
LRF
NT seq 732 nt   +upstreamnt  +downstreamnt
atgtggcggcggcaagtgggtgcccttcttctccggcaccgatccacgccttcctccacc
ctccgccaccatctccccctccccgtccccgaccagagcccacctctcgcttccaatctt
ctgctccgcctcttcacttctcaatctggagaggggggtgatggtgccaccaagcccttc
attgctttcgtcttagggggtcccgggagtgggaaaggtacgcaatgtgtccggatcgct
tctgattttgggtttgctcatttgagtgctggtgaccttctacggagtgaaatttcaact
ggcagtgagaaaggggagttgatcttaaatataataaaagaagggaagattgttccatca
gagattactgttgaactgattagaaaagctatggaatcgagcgatgctaaaagggttctt
attgatggtttcccaaggtgtgaggaaaacaggatcgcctttgaaagaataactggaaca
gaaccagaccttgtgattttctttgactgccctgaggatgagatggttaaacgtttacta
ggccgtaaccagggacgagtggatgataacattgaaacaatcaagaagcgcctaaaggtg
tttgagagtctaaatattcctgttgttgactactacacttcaagaggaaaggttcacaag
ataaatgcaaccggaactgaagaagaaatctttggagcagtccacaagctgttttcctcc
ttaaggttttga

KEGG   Oryza sativa japonica (Japanese rice): 4339882
Entry
4339882           CDS       T01015                                 
Symbol
OsJ_19856
Name
(RefSeq) uMP-CMP kinase 1 isoform X2
  KO
K13800  UMP-CMP kinase [EC:2.7.4.14]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00240  Pyrimidine metabolism
osa01100  Metabolic pathways
osa01232  Nucleotide metabolism
osa01240  Biosynthesis of cofactors
Module
osa_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    4339882 (OsJ_19856)
Enzymes [BR:osa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.4  Phosphotransferases with a phosphate group as acceptor
    2.7.4.14  UMP/CMP kinase
     4339882 (OsJ_19856)
SSDB
Motif
Pfam: ADK AAA_17 AAA_33 AAA_18 Thymidylate_kin Cytidylate_kin dNK SRP54 CPT AAA_19 Zeta_toxin DUF4952
Other DBs
NCBI-GeneID: 4339882
NCBI-ProteinID: XP_015641837
UniProt: Q5VRN0
LinkDB
Position
6:join(721388..721405,721744..721801,721935..722052,722173..722329,722490..722570,722654..722761,722927..722998,723101..723185,723352..723386)
AA seq 243 aa
MAHANKNHIESFPPPGKKITIVFVIGGPGSGKGTQCAKIVKQFGFTHLSAGDLLREEAKY
DTEQGTMIKNLMNEGKLVSSDLIVKLLFKAMRESGNDKFLVDGFPRNEENRHAYENIIHI
EPEFLLFIDCSKEEMERRILNRNQGRDDDNIDTIRRRFDVFQQQTLPVIQYYEKRGKLRK
VDGNRQVDEVFEDVKAIFAQLNNQKIHGGQQASGLSRAQMNPLKRWFFDFFCGCFGTKEE
ARN
NT seq 732 nt   +upstreamnt  +downstreamnt
atggcacacgcaaacaagaatcacattgagtcatttccacctcctgggaaaaagataaca
atcgtgttcgtcataggtggccctggcagtggcaaaggcactcaatgtgccaaaattgtt
aagcagtttggctttacacatctgagtgctggtgatctccttcgtgaagaagcaaaatat
gatactgaacaaggtacaatgatcaagaatctcatgaatgaagggaagcttgtgtcatct
gatctcatcgttaagctactatttaaggccatgcgagaaagtgggaatgataagttcctt
gttgatggatttccacgaaatgaagaaaatcgacatgcgtatgaaaatattatccacatt
gagccagagttcctgctgttcattgactgctcaaaggaagagatggagcggcgcattttg
aaccgaaaccagggaagagatgatgacaacatcgacactattaggagacgctttgatgtt
tttcagcagcaaactcttccagttattcagtactatgagaaaagggggaaactcagaaag
gttgatggtaaccgacaggtagatgaagttttcgaagacgttaaggccatttttgctcag
ttgaacaatcagaaaattcatggtggccagcaagctagtggtttgagcagagcacaaatg
aatccattgaaacgttggttctttgactttttctgcggttgctttgggactaaagaagaa
gcaagaaactga

KEGG   Oryza sativa japonica (Japanese rice): 4343960
Entry
4343960           CDS       T01015                                 
Symbol
ura6
Name
(RefSeq) uMP-CMP kinase 3
  KO
K13800  UMP-CMP kinase [EC:2.7.4.14]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00240  Pyrimidine metabolism
osa01100  Metabolic pathways
osa01232  Nucleotide metabolism
osa01240  Biosynthesis of cofactors
Module
osa_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    4343960 (ura6)
Enzymes [BR:osa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.4  Phosphotransferases with a phosphate group as acceptor
    2.7.4.14  UMP/CMP kinase
     4343960 (ura6)
SSDB
Motif
Pfam: ADK AAA_17 AAA_18 AAA_33 Thymidylate_kin AAA_19 NB-ARC SRP54 MLKL_N AAA_lid_At3g28540 DUF7683
Other DBs
NCBI-GeneID: 4343960
NCBI-ProteinID: NP_001390110
LinkDB
Position
7:complement(join(26105980..26105988,26106192..26106260,26106387..26106494,26106576..26106656,26106816..26106972,26107081..26107198,26107306..26107360,26107800..26107835))
AA seq 210 aa
MGSVVDAPVVVEGVAENMLGDKKVTVVFVLGGPGSGKGTQCANIVEHFGFTHLSAGDLLR
AEIKSGSENGTMIENMIKEGKIVPSEVTIKLLQDAMIKNENDKFLIDGFPRNEENRAAFE
NVTKISPAFVLFFDCSEEEMERRLLGRNQGRVDDNIETIRKRFKVFVESSLPVIEHYNAK
NKVKKIDAAKPISEVFEDVKAIFAPYAKVE
NT seq 633 nt   +upstreamnt  +downstreamnt
atgggttcagttgtggatgctccagtggttgtggagggggttgctgagaacatgttgggt
gataagaaagttacagttgtatttgttctaggtggtcctggaagtggaaaaggcacacag
tgtgccaacattgtggaacactttggattcacccacttaagtgctggagaccttttgcgt
gcagagataaaatctggttctgagaatggaactatgattgagaacatgataaaggagggg
aagattgttccgtcagaggttactataaagctcttgcaagatgccatgattaaaaatgag
aatgataagtttctaatcgatgggttcccaaggaatgaagagaatcgtgctgccttcgag
aatgttacaaaaatttcccctgcatttgtgctattttttgactgttctgaagaagagatg
gaaagacgtcttttgggacgcaatcagggtagagttgatgacaacattgagaccattagg
aaaagattcaaagtttttgttgaatcaagtttgcctgtaattgagcactacaatgcgaag
aacaaagttaaaaagattgatgctgcaaaaccaatttctgaagtgtttgaagatgtcaaa
gccatttttgccccatatgctaaggttgaatag

KEGG   Oryza sativa japonica (Japanese rice): 9267059
Entry
9267059           CDS       T01015                                 
Name
(RefSeq) UMP-CMP kinase 4-like isoform X1
  KO
K13800  UMP-CMP kinase [EC:2.7.4.14]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00240  Pyrimidine metabolism
osa01100  Metabolic pathways
osa01232  Nucleotide metabolism
osa01240  Biosynthesis of cofactors
Module
osa_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    9267059
Enzymes [BR:osa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.4  Phosphotransferases with a phosphate group as acceptor
    2.7.4.14  UMP/CMP kinase
     9267059
SSDB
Motif
Pfam: ADK AAA_17 AAA_18 Thymidylate_kin AAA_33 NPHP3_N AAA_19 NB-ARC Viral_helicase1
Other DBs
NCBI-GeneID: 9267059
NCBI-ProteinID: XP_015643872
LinkDB
Position
6:join(5388211..5388291,5389120..5389174,5389334..5389451,5389537..5389693,5389794..5389904,5390004..5390111,5390845..5390913)
AA seq 232 aa
MRGGLVASARLLPRPLVRWFLQRRAQQDINENMLGGKKVKIIFVLGGPGSGKGTQCSNIV
EHFGFIHLSAGELLRAEINSGSENGTMIDTIITEGKIVPSEITIKLLQEAIIKGGNDKYI
IDGFPRNEENRVVFESVTLVTYFQLLQISISPEFVLFFDCSEEEMERRLLGRNQGRSDDN
IETIRKRLKVFVESSLPVIEYYESKGMVKKIDATKPAPEVFEDVKAIFTHMA
NT seq 699 nt   +upstreamnt  +downstreamnt
atgcgtggaggtctggtcgcctctgcgcggctactccctcgccctctcgtccggtggttt
ctccagcgacgagctcagcaggatattaatgagaacatgttgggtggcaagaaagttaaa
attatatttgttctaggtggtcctggaagtggaaaaggaactcagtgcagcaatattgta
gagcattttggttttatccatcttagcgctggtgaactcttgcgtgcagaaatcaattct
ggttcagagaacggaaccatgattgacactatcataacggaagggaaaatcgtcccatct
gagataaccataaagcttttgcaagaagccataataaaaggtggaaatgacaagtatatc
attgatggatttccacggaacgaagagaatcgtgttgtatttgagagtgttaccttggtt
acttacttccaactgcttcagataagcatatctcctgaatttgttctatttttcgattgt
tctgaggaagaaatggaaaggcgccttttgggtcgcaaccagggaagaagtgatgataac
attgagactatcaggaaaagattgaaagtttttgtagaatccagcttgcctgtcattgag
tattatgagtcaaaaggcatggttaagaagattgatgcgacaaaaccagcccctgaggtg
tttgaagatgtgaaagccatctttacccatatggcttga

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