Oryza sativa japonica (Japanese rice): 4331250
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Entry
4331250 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K12864
beta-catenin-like protein 1
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4331250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4331250
Spliceosome [BR:
osa03041
]
Complex B
Other components
Prp19 complex
4331250
Complex C
Prp19-CDC5 complex
4331250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNBL
ARM_ARMC5
CCDC138_C
DUF6857
Cas_Cmr5
HAAS
PH_23
Ost5
Motif
Other DBs
NCBI-GeneID:
4331250
NCBI-ProteinID:
XP_015622617
UniProt:
Q0DW56
A0A0P0VRL8
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All DBs
Position
2:complement(join(36246324..36246419,36246623..36246704,36246799..36246836,36246952..36247008,36247146..36247209,36247298..36247394,36248188..36248272,36248995..36250026))
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AA seq
516 aa
AA seq
DB search
MDAAHKRKRPDADDDGAAGAVDLSSLEGADDVEVLDLRAAKRLLLAFERRLRDNLEARMK
HPDDPARFADSEIALHAETDRLRLLAGAPDLFPDLVPLGLASSLSSLLTHDNADLAAAAA
SLLADLTDSDDPDDLAGLHSLADALVEANALDLLVHNLSRFSEADPDEAEAVHHTLSVVE
NLLELRPQLADIVCDRTKLLRWLLARLKAREFDANKQYASEILAILLQDSPANQKRLGNI
NGVDGLLQAVAMYKSRDPKTSDEEEMLENLFDCLCCVLMPMENKERFVKAEGVELMIIIM
KQKKLAYSSAIRTLDFAMTRFPPACERFVDVLGLKTAFAAFMGKIPVNKKNKKESYQEAL
EERVISLIASLFGGITKGSRRIRLLGKFVENECEKIDRLMEFYTRYSERVKAETERLDSL
DLDDLEMDEDERYNRKLEAGLYTLQLIALILGHIWHSGNSQMRTRIELLLRQNKLTKDDV
KDILEEYHDNIGDLDGPEEKERAQGRTKEIIASLSL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggcgcacaagcgcaagcggccggacgccgacgacgacggcgctgcgggggcg
gtggacctctcctccctggagggcgccgacgacgtggaggtgctcgacctccgcgccgcc
aagcgcctcctgctcgccttcgagcgccgcctgcgcgacaacctcgaggcccgcatgaag
caccccgacgaccccgcccgcttcgccgactccgagatcgccctccacgccgagaccgac
cgcctccgcctcctcgccggcgccccggacctcttcccggacctcgtccccctcggcctc
gcctcctccctctcctccctcctcacccacgacaacgccgacctcgccgccgccgctgcc
tccctcctcgccgacctcaccgactccgacgaccccgacgacctcgccggcctccactcc
ctcgccgacgccctcgtcgaagccaacgccctcgacctcctcgtccacaatctctcccgc
ttctccgaggccgaccccgacgaagccgaggctgtccaccacaccctctctgtcgttgaa
aacctcctcgagctccgcccccaactcgccgacattgtctgcgaccgcaccaagcttctc
cgctggctcctcgcccgcctcaaggcccgcgagttcgatgccaacaagcagtacgcctcc
gagatcctcgccatcctcctacaggacagccccgccaaccagaagcgcctgggcaacatc
aatggagtcgacggcctgctgcaggccgttgccatgtacaagtccagggacccaaagacc
tctgatgaggaggagatgctcgagaacctcttcgattgcctctgctgtgtgctcatgccc
atggagaacaaggaaagatttgtcaaggcggagggcgtcgagctcatgatcatcatcatg
aagcagaagaagctggcatacagctctgccatccggaccctcgattttgccatgactagg
ttcccacctgcttgcgagcgctttgttgatgtacttgggctgaagaccgcttttgctgcg
ttcatgggtaagattcctgtgaacaagaaaaacaaaaaagagagttatcaggaagcacta
gaagaacgggtcatttcactaattgcttcattgtttggtggtattacaaaaggttcacga
agaatcaggttactaggaaaatttgttgagaatgaatgtgaaaagatagaccgtttgatg
gagttttacacaaggtattcagaaagagtgaaagctgagactgaaagacttgacagtctt
gatttagatgatctagagatggatgaagatgagcgctacaatcgcaagctagaagctggt
ctttacacacttcagttaattgcacttattctggggcatatatggcactctggcaattca
cagatgagaacaagaatagagttgcttctaagacagaacaaactgactaaggatgacgtt
aaggatatacttgaggagtatcatgacaacattggagatctggatgggcctgaagagaag
gaaagagcgcaagggcggacaaaagagatcatagcatctttatctttgtga
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